Bhi06G000083 (gene) Wax gourd (B227) v1

Overview


Name	Bhi06G000083
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	thylakoid membrane protein slr0575
Location	chr6: 1984536 .. 1989820 (+)
RNA-Seq Expression	Bhi06G000083
Synteny	Bhi06G000083

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAATCAGTGGAATATCTCCAACTCCTGGTCTCTGTTCTTGCTCCCATGATCAATTCACTCTCGGCAATCGCCTCTCCGTTCTTTCTCTGCGTTTCTCTCGTCCCTACCGCACAATTTCCCCTCCCGGCGGTGGCAATTTCATCGGCAGACCCAACTTTTTGGTCCATTTTGAACCTAGAACGCTTCTGCAGAAGCCTCAGCGGTTAGCTTTCACATTCTCGGCTAGAGCTGCTGATTCTACTCAGCCGTCTTCCGTTTCTGCCTCGCCGGACAAAGCAGTAGTTTCCGACGACGAATTCTCGCTTGCCAAAGTACGTTTCTGATTCTCTATGCTTATGAATTCTTGAGAGTATTGGCAAAGGACACTCCTAGGTAGCAACTAGATTGGAATTTCTCGATTATGTTTTATGTGCTCATAGTGGTTGTAAAGAAACGAGAGGAGATGTTTGAGATAAAAGTAGTGTTTAAATTGTGCGGTGGTAAAATTATGTTGTCGCGAAAATTAAAGAGACTTCTCTCCAATTTTAGTCGAAGAATATTTATATATAAATATAATATATATATATGTATATGTTGCAGAGATTTGGATTTAAGATATCATGCTTCGATACTATACTAAAATCTTTGTTAGAATGCATTGAGTCCGTTGTCTAGCTCTCCAAATCTAAGTGCAGGGTCTTGCTGAGAATAAAACTATTCTCTCCTTCTACCTATAGGCCGTAGGTGTAGCTAACATCCTATTAGTGAATCACGTAAATCTCTGTGTCAATCTTTACTATTTACGCCTTCAAATTTTCTTTACTCGTCAATTTCATTTCTGTCATAACAATATTGTTATAATTAAAAGTCTTGGCTGTTAAACTAGGACATATTAATCTTTTACTGTTTGAAAAATAAAATATGCCCCAAATATATGGAATAAAGAAACTACGTAGGTACCAGATACTTTGATATATAATGCAATAAAATACTTATGGGAGCTGGCAGGATGGTACTCCTGATTGCAAAGGTGAAGTAGTATATAAGAGAGTCATGACAGTATACTGATTTTGATTATTGCCTTTGAATGCAATGTACAATTTCTTTTCTCACTATTGATGTACACACCTTTTTTCTTTATGAATTGTGATGTAATTTCTTTTAGTCATTTCTTCTGTTGTTGTGAGGTTTTACCGTTCTGATTTTTTACAGGTTTCATTTGGTGTAATTGGCTTAGGTGTTGGGATTTCTTTGTTGTCGTAAGTTGTTTCCTCCTCAGGTTCAAAGTTCCTTAATTTATAATTTGTACATTTGATCTGTTTTTGTTCTATAGGTATGGATTCGGTGCATACTTTAATATCCTTCCGGGATCTGAATGGTCTGCCATTATGCTAACATATGGTTTCCCTCTTGCAATTATTGGCATGGCTCTAAAGGTATAACTTTCTATTTATTCACCTTTTTCAGAGTAAAAAAGGATTAACATGATACATATATGCCTTGCTTCAGTAGCCACATCCGTCTTATGGTCATTTCAGCTTTTCTATACCCTATATATTAAAAGTTATAACTTAGTAGCTTATCCAAATACAAAAATACCGAAAAGTTTCTATCTGGTATTTTAAAGATAGGTAGTGTCATTTTAGTGTTCAACGACATTATATGTTTCATTGGTTATTTCCTTTCTGAAATGGCCTTGTAGTGTTGCTTCTTTTTGCCTTATTCCTTAACTTCATGAACTTGAGCTGAAAAGGAAAAGAATTGATAAAGAAAATTGGGTAACTCTCTAGCCTTTGAGTGTTTTGCAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTCAGATGCTCAAAAACTGAGGGAAACATGCGCCACCCCAATTCTCAAACAGGTTTTTTTTATGGAACTTGATTCCTTCTAATGGCCGTGCTTGTAAAATATGTCGTAAACATACTCTCTTGTGATTGCTTGTGTTGATAGACCGGCCATTCTTGTACATTTATTATTTTCTTCTTTTTTTGAGAAGAATCTTGTACATTTATCTTATAGAGGGAGTGGAAGGACATATTTGTAACTAGAATGTTTAGGAGAAAAAAATTTGGGCCCAGAAGTGCGGGAAGCAATTATACTTGGGTAGGAGGGGTGGAAGAGAGAAATGAAGAGGAGTTAAAGGTATGGAAAGAATGGGAAAGAGCAGTCTGATTTTTAGCTGCTTCTGGAGACTTTGAGGCCTATCAAAATTCTTCTTTTTTCTATTTATTTTTGCCTGTCATTTACAATTTCCAGTTGAGACTCGTTTTTCTATTTACTGTTCTACGATATTTTGTTTATTTAGGTTTCTTCAACTAGCCAATTCAGTTTTTAAACATGAACTTTCATGTTGGTGATACCGTATTACAGCTTGGGAAAGCATGAATCTGTTGTTTTGTGTGAATATTATCTTTTTCAAATTATAAATGAAAAGTGTTGGAACCGAATGTCGATTGTTGTGCTGTGGTCTGTGGATAAACCCACTGCCTTGAAAGCAAGATCGTGCGACCTCGGTGCTAAGTCGTCAAAGCCTGTTGCTCTCCAAGGTTAACACAACTTTTGATCTTTTGACGTACACTCGTCGAAGACCGAGTTAGAATTGATGAAAAATTGTTCAAAAAATAGTAGATCTAGAGAGGAAAACATGAGGAAGAAGAAAAGATGAAATCATCTCCGTCTCTTTTTTCATAAACTAAGAACCCTTTTTAAAGGAAAAATAATTGAAGAATAAAAACCATTTTACAATTAATTGAAGAATTAAGTGAAATTAATTTAAATAAACGGTTACAAAACTGTTAAAAACTTTTTTTTTTTCTTTTGTTATGGGCCAAAAGCCCAAAGTTATTCCCAACAAAAAGTTATCAATTAATTCAAAAAGAACAAAAAGCTTGCCTTTTATTTCACTTCGACTTTGCTTCAAATAATATGCCACTTGCGAGTTTAACTTAAATTGTTTCAAATACATTCTCATTTTGTACATACACAAGTTTCATTGTATAAATTGTTTCATATTTCTAATCACTTCATAACGTTTTTCACTAGGTAAGAGACGATGTTATTAGGTTCCGTTATGGGGATGAACAACACTTGGATGAGGCATTGAAACGGATTTTCCAGTATGGTATGGTAAGTAATTGGGTTTACTTGAATCATCTTTCTTTGTGATCTTTGTTTGCAGTTTTACTTTCCAGTAACTTCATACTCTGTTTTTTTTTCTTTTCTTTTGTTTTTTTTCCTTTTGTTTTTTGTTTTCTTGTAGATTCTTATTACCTTATTAGCATTATATCAATTCGACTTCTGCTTTATCAGTGTAGAAACTGAAAGTTGGCTTCACTTTTACTTAGCAGTTGCATTGTTCTGAAACTAGAATTTCAATACATCACTGGATGTGGACTAGTATTTGGATCCAAGCTGTTCGAACTCCAGTTCGCGCGTGTCTCATCATAATTTTCAATTTTGGATCCGGCAAATATTCCAATACATAGGTCTAGGAGTGCACATTTTGATGTAATTTTGAAACTGATATTAGATAAATGTTGAGATAGCCTCATATCATCTATTTGCCCTCTTCTTGAAGGATGAAGTGTGGCATCCAACGTTCAAAAGAATTCTTACAATCTTTACTGAATATGAAAGAAATGGTATTTAAGGAGGTTTCGAAGTTGTCACCATTATATAGGCTCTGCTATTTGACTCAATTGATAACGCCATAATATTGTAGTAGTAATGAACTAATTGAACAAAATAGTAAGTTAACTAGTCAGCAAATTGATCAACTAAGAAGACTGACCAATTGGTAAATGTGACGAACAGAAAAAGATAAAGTACTATTTGAAGCTAACTTCCAGCCTTGCATTATGTATTGCCTGTATTCTAGTTTTAGATGTCTGTCATATAGCAGACACGCAGGACTCCTAACATTTGTGGGACGGTTAAATAGACTGTTAGAGGGCTAATAGTTATTCTTTTGACCCTTGACACAAATGAAAATATTAAATAAAACTTATGATGTTGAACAAAATATTATATTTCTTGTTTTGAAAATATAACTTCTGGGATATATTTGCTCATGGGTGTTCTGTACTTACAAGACATTGAGCCATTTAGAACTGTGTCACTGATTTTAAATTTTCTTAATGAGCCTTAGCATAAGATGTTCCATTATTATTATGCATTTGATTTCTTAAACTTCTCTTGGTACTCTTGTGCTTCATATTGTATTTCAAATGTTAACATCTAATTCAAATATAAACTTATGTAAGCTGTTCATCATCGGAATTATTGAACTTCATCAAAGTATACAAATAGATTTTGGTCTAACTCCCAACTTTTTGAAGATTACGTGTTGTCATGTCCATCTCCTCTGCTTGTACCCTACTTTCTAGCCAATTAGCAGTTCGATGTATAATAAATTTATATATCATAATACTGTAAGATATGAACATTTAATGAAATTGTTCTTTTGGTACTTTGGATGGATCAATTTCTGCAACGCTTATTCACAAGTTAATATTGTTTTTAGGTTGTATTTTAGATTTTTCAATGTACATTGCACTGCAATGTCTTGTATGGCTAAGGCTTCTCTGCTTATATATTATCTTCTTTCCATCATTTATTCCCCTCATTTCTCTCTGCCTCGTTCTTAACTTGGTCATCCTGCATTAGATAACTTGAAGAAGGTCAGACGGATACATAAATACAGATAGAAGTTTCTTATAAATTGTGTATTTGAATCCTCATTTTCATGCATGACATCAATTTTTGTAAATTGATAAATACTGCATTCTACTTTTGTATGCGCAGGCTGGGGGAATTCCTCGAAGGAGTGCACCGATTTTGCAAAGTATACGTGAAGAAGTATGTTTACATGACTTTGTTTCTGTTTCAGATATCATCGGTTAAAATATTGGTCACTGCAGTACTTTTGACGCTTCTGATTATACCAACTGGAAGTACTACTAAATACAATAGCATGATAACAACACTTATGATTCTAATATTATGCCATGGGGTATGATTCTAGGTCATAGAAGATGGAAAGTATTGTCTGGTCTTGGTGTTCGAAGCCAAAGCCTTGACATTGTCAGATTTTGAGCAAAGACAGGTAATTGCCATATGCTTCTTTTTAATATGGTCGAAGAAGGAGTGCTGTCAGATTTTTTTACCTTCTTAATTCTCCAGAAGATCAATTTAATTGCTCAAAACCCAAATTTTGCTAGTGCTGGTGTAGTCGTGATGATAAATGTTTTCGTCATTCTAAAGGAATAA

mRNA sequence

ATGTCAATCAGTGGAATATCTCCAACTCCTGGTCTCTGTTCTTGCTCCCATGATCAATTCACTCTCGGCAATCGCCTCTCCGTTCTTTCTCTGCGTTTCTCTCGTCCCTACCGCACAATTTCCCCTCCCGGCGGTGGCAATTTCATCGGCAGACCCAACTTTTTGGTCCATTTTGAACCTAGAACGCTTCTGCAGAAGCCTCAGCGGTTAGCTTTCACATTCTCGGCTAGAGCTGCTGATTCTACTCAGCCGTCTTCCGTTTCTGCCTCGCCGGACAAAGCAGTAGTTTCCGACGACGAATTCTCGCTTGCCAAAGTTTCATTTGGTGTAATTGGCTTAGGTGTTGGGATTTCTTTGTTGTCGTATGGATTCGGTGCATACTTTAATATCCTTCCGGGATCTGAATGGTCTGCCATTATGCTAACATATGGTTTCCCTCTTGCAATTATTGGCATGGCTCTAAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTCAGATGCTCAAAAACTGAGGGAAACATGCGCCACCCCAATTCTCAAACAGGTAAGAGACGATGTTATTAGGTTCCGTTATGGGGATGAACAACACTTGGATGAGGCATTGAAACGGATTTTCCAGTATGGTATGGCTGGGGGAATTCCTCGAAGGAGTGCACCGATTTTGCAAAGTATACGTGAAGAAGTCATAGAAGATGGAAAGTATTGTCTGGTCTTGGTGTTCGAAGCCAAAGCCTTGACATTGTCAGATTTTGAGCAAAGACAGAAGATCAATTTAATTGCTCAAAACCCAAATTTTGCTAGTGCTGGTGTAGTCGTGATGATAAATGTTTTCGTCATTCTAAAGGAATAA

Coding sequence (CDS)

ATGTCAATCAGTGGAATATCTCCAACTCCTGGTCTCTGTTCTTGCTCCCATGATCAATTCACTCTCGGCAATCGCCTCTCCGTTCTTTCTCTGCGTTTCTCTCGTCCCTACCGCACAATTTCCCCTCCCGGCGGTGGCAATTTCATCGGCAGACCCAACTTTTTGGTCCATTTTGAACCTAGAACGCTTCTGCAGAAGCCTCAGCGGTTAGCTTTCACATTCTCGGCTAGAGCTGCTGATTCTACTCAGCCGTCTTCCGTTTCTGCCTCGCCGGACAAAGCAGTAGTTTCCGACGACGAATTCTCGCTTGCCAAAGTTTCATTTGGTGTAATTGGCTTAGGTGTTGGGATTTCTTTGTTGTCGTATGGATTCGGTGCATACTTTAATATCCTTCCGGGATCTGAATGGTCTGCCATTATGCTAACATATGGTTTCCCTCTTGCAATTATTGGCATGGCTCTAAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTCAGATGCTCAAAAACTGAGGGAAACATGCGCCACCCCAATTCTCAAACAGGTAAGAGACGATGTTATTAGGTTCCGTTATGGGGATGAACAACACTTGGATGAGGCATTGAAACGGATTTTCCAGTATGGTATGGCTGGGGGAATTCCTCGAAGGAGTGCACCGATTTTGCAAAGTATACGTGAAGAAGTCATAGAAGATGGAAAGTATTGTCTGGTCTTGGTGTTCGAAGCCAAAGCCTTGACATTGTCAGATTTTGAGCAAAGACAGAAGATCAATTTAATTGCTCAAAACCCAAATTTTGCTAGTGCTGGTGTAGTCGTGATGATAAATGTTTTCGTCATTCTAAAGGAATAA

Protein sequence

MSISGISPTPGLCSCSHDQFTLGNRLSVLSLRFSRPYRTISPPGGGNFIGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVSDDEFSLAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGMAGGIPRRSAPILQSIREEVIEDGKYCLVLVFEAKALTLSDFEQRQKINLIAQNPNFASAGVVVMINVFVILKE

Homology

[Close]

BLAST of Bhi06G000083 vs. TAIR 10
Match: AT5G38660.1 (acclimation of photosynthesis to environment )

HSP 1 Score: 300.8 bits (769), Expect = 1.1e-81
Identity = 152/198 (76.77%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 60  PRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVSDDEFSLAKVSFGVIGLGVGISL 119
           P T L K + L      RAADST  S   AS D+ ++ DDEF+LAK+SFGVIGLG+G+SL
Sbjct: 49  PETRL-KREVLKLDVVGRAADSTSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSL 108

Query: 120 LSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQKLRETCAT 179
           LSYGFGAYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL+YSDA KLRE+CAT
Sbjct: 109 LSYGFGAYFTILPGTEWSAIMLTYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCAT 168

Query: 180 PILKQVRDDVIRFRYGDEQHLDEALKRIFQYGMAGGIPRRSAPILQSIREEVIEDGKYCL 239
           PIL QVR+DV R+RYGDEQHL+EALKRIFQYG+ GGIPRRSAPILQ IREEV+ DG+YC+
Sbjct: 169 PILTQVRNDVTRYRYGDEQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCV 228

Query: 240 VLVFEAKALTLSDFEQRQ 258
           VLVFEAKALTLSDFE+RQ
Sbjct: 229 VLVFEAKALTLSDFEKRQ 245

[Close]

BLAST of Bhi06G000083 vs. TAIR 10
Match: AT5G38660.2 (acclimation of photosynthesis to environment )

HSP 1 Score: 300.8 bits (769), Expect = 1.1e-81
Identity = 152/198 (76.77%), Postives = 172/198 (86.87%), Query Frame = 0


Query: 60  PRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVSDDEFSLAKVSFGVIGLGVGISL 119
           P T L K + L      RAADST  S   AS D+ ++ DDEF+LAK+SFGVIGLG+G+SL
Sbjct: 49  PETRL-KREVLKLDVVGRAADSTSSSPSVASGDRTLIPDDEFTLAKISFGVIGLGLGVSL 108

Query: 120 LSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQKLRETCAT 179
           LSYGFGAYF ILPG+EWSAIMLTYGFPL+IIGMALKYAELKPVPCL+YSDA KLRE+CAT
Sbjct: 109 LSYGFGAYFTILPGTEWSAIMLTYGFPLSIIGMALKYAELKPVPCLSYSDAVKLRESCAT 168

Query: 180 PILKQVRDDVIRFRYGDEQHLDEALKRIFQYGMAGGIPRRSAPILQSIREEVIEDGKYCL 239
           PIL QVR+DV R+RYGDEQHL+EALKRIFQYG+ GGIPRRSAPILQ IREEV+ DG+YC+
Sbjct: 169 PILTQVRNDVTRYRYGDEQHLEEALKRIFQYGLGGGIPRRSAPILQLIREEVLTDGRYCV 228

Query: 240 VLVFEAKALTLSDFEQRQ 258
           VLVFEAKALTLSDFE+RQ
Sbjct: 229 VLVFEAKALTLSDFEKRQ 245

[Close]

BLAST of Bhi06G000083 vs. ExPASy Swiss-Prot
Match: Q55403 (Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr0575 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.5e-17
Identity = 63/158 (39.87%), Postives = 88/158 (55.70%), Query Frame = 0


Query: 103 LAKVSFGVIGLGVGISLLSYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPV 162
           L K+S   +GL VG  L   GF AY   L  +  +     YG PL + G+ALK AELKP+
Sbjct: 2   LPKISLAAVGLTVGGILTITGFVAY--ALDYATLNLAGFFYGIPLVLGGLALKAAELKPI 61

Query: 163 PCL--TYSDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGMAGGIPRRS 222
           P    T      LR   ATP   Q+R DV R+RYG E HLDE+L+R+   G++     R 
Sbjct: 62  PFSQPTSEKIIALRNQLATPTQNQIRKDVTRYRYGQEAHLDESLERL---GLSPTDEER- 121

Query: 223 APILQSIREEVIEDGKYCLVLVFEAKALTLSDFEQRQK 259
            P+L S+ E+  E GKY L L F +  ++L  ++++Q+
Sbjct: 122 -PVLTSLLEQDWE-GKYVLTLTFTSPFISLETWQEKQE 151

[Close]

BLAST of Bhi06G000083 vs. ExPASy TrEMBL
Match: A0A5A7TDN5 (Thylakoid membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001820 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 9.3e-124
Identity = 229/257 (89.11%), Postives = 238/257 (92.61%), Query Frame = 0


Query: 1   MSISGISPTPGLCSCSHDQFTLGNRLSVLSLRFSRPYRTISPPGGGNFIGRPNFLVHFEP 60
           MSI+ ISPTPGL + SH QFTL NRLS+LSL FSRP R IS PGGGNFI R N  VHFE 
Sbjct: 1   MSITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPISLPGGGNFIARTNVFVHFET 60

Query: 61  RTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVSDDEFSLAKVSFGVIGLGVGISLL 120
           +TLL KP RLAFTFS RAADSTQPS+VSASPDKAVV+DDEFSLAKVSFGVIGLGVG+SLL
Sbjct: 61  KTLLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120

Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQKLRETCATP 180
           SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTY DAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180

Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGMAGGIPRRSAPILQSIREEVIEDGKYCLV 240
           ILKQVRDDVIRFRYGDEQHLDEALKRIFQYG+AGGIPRRSAPIL+SIREEV EDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLV 240

Query: 241 LVFEAKALTLSDFEQRQ 258
           LVFEAKALTLSDFEQRQ
Sbjct: 241 LVFEAKALTLSDFEQRQ 257

[Close]

BLAST of Bhi06G000083 vs. ExPASy TrEMBL
Match: A0A0A0KVX1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644000 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.2e-123
Identity = 228/257 (88.72%), Postives = 238/257 (92.61%), Query Frame = 0


Query: 1   MSISGISPTPGLCSCSHDQFTLGNRLSVLSLRFSRPYRTISPPGGGNFIGRPNFLVHFEP 60
           MSI+ ISPTPGL +CSHDQFTL NRLS++SL FSRP RTIS PGG NFI R N  VHFE 
Sbjct: 1   MSITAISPTPGLSTCSHDQFTLSNRLSLVSLPFSRPNRTISLPGGANFIARTNVFVHFET 60

Query: 61  RTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVSDDEFSLAKVSFGVIGLGVGISLL 120
            TLL KP RLAF+FS RAADSTQPS+VSASP KAVV+DDEFSLAKVSFGVIGLGVG+SLL
Sbjct: 61  TTLLHKPHRLAFSFSTRAADSTQPSAVSASPGKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120

Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQKLRETCATP 180
           SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTY DAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180

Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGMAGGIPRRSAPILQSIREEVIEDGKYCLV 240
           ILKQVRDDVIRFRYGDEQHLDEALKRIFQYG+AGGIPRRSAPILQSIREEV EDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLV 240

Query: 241 LVFEAKALTLSDFEQRQ 258
           LVFEAKALTLSDFE+RQ
Sbjct: 241 LVFEAKALTLSDFEKRQ 257

[Close]

BLAST of Bhi06G000083 vs. ExPASy TrEMBL
Match: A0A1S3CAR1 (thylakoid membrane protein slr0575 OS=Cucumis melo OX=3656 GN=LOC103498589 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.6e-123
Identity = 228/257 (88.72%), Postives = 237/257 (92.22%), Query Frame = 0


Query: 1   MSISGISPTPGLCSCSHDQFTLGNRLSVLSLRFSRPYRTISPPGGGNFIGRPNFLVHFEP 60
           MSI+ ISPTPGL + SH QFTL NRLS+LSL FSRP R I  PGGGNFI R N  VHFE 
Sbjct: 1   MSITAISPTPGLSTSSHHQFTLSNRLSLLSLPFSRPNRPIPLPGGGNFIARTNVFVHFET 60

Query: 61  RTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVSDDEFSLAKVSFGVIGLGVGISLL 120
           +TLL KP RLAFTFS RAADSTQPS+VSASPDKAVV+DDEFSLAKVSFGVIGLGVG+SLL
Sbjct: 61  KTLLHKPHRLAFTFSTRAADSTQPSAVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLL 120

Query: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQKLRETCATP 180
           SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTY DAQKLRETCATP
Sbjct: 121 SYGFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATP 180

Query: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGMAGGIPRRSAPILQSIREEVIEDGKYCLV 240
           ILKQVRDDVIRFRYGDEQHLDEALKRIFQYG+AGGIPRRSAPIL+SIREEV EDGKYCLV
Sbjct: 181 ILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILESIREEVTEDGKYCLV 240

Query: 241 LVFEAKALTLSDFEQRQ 258
           LVFEAKALTLSDFEQRQ
Sbjct: 241 LVFEAKALTLSDFEQRQ 257

[Close]

BLAST of Bhi06G000083 vs. ExPASy TrEMBL
Match: A0A6J1GWV5 (uncharacterized protein LOC111458174 OS=Cucurbita moschata OX=3662 GN=LOC111458174 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.7e-120
Identity = 225/255 (88.24%), Postives = 237/255 (92.94%), Query Frame = 0


Query: 3   ISGISPTPGLCSCSHDQFTLGNRLSVLSLRFSRPYRTISPPGGGNFIGRPNFLVHFEPRT 62
           +SGISP   L  CSHD+FTL NRLS++SLRFSRPY   S PGGGN  GR NF VHFEPR 
Sbjct: 1   MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHFEPRA 60

Query: 63  LLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVSDDEFSLAKVSFGVIGLGVGISLLSY 122
            LQKPQRLAFTFSARAAD+TQPSSVSASPDKAVV+DDEFSLAKVSFGVIGLGVGISLLSY
Sbjct: 61  PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120

Query: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQKLRETCATPIL 182
           GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTY +AQKLRE+CATPIL
Sbjct: 121 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180

Query: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGMAGGIPRRSAPILQSIREEVIEDGKYCLVLV 242
           KQVRDDVIR+RYGDEQHLDEALKRIFQ+G+AGGIPRRSAPILQSIREEV EDGKYCLVLV
Sbjct: 181 KQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLV 240

Query: 243 FEAKALTLSDFEQRQ 258
           FEAKALTLSDFE+RQ
Sbjct: 241 FEAKALTLSDFEKRQ 253

[Close]

BLAST of Bhi06G000083 vs. ExPASy TrEMBL
Match: A0A6J1JQQ4 (uncharacterized protein LOC111486968 OS=Cucurbita maxima OX=3661 GN=LOC111486968 PE=4 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.8e-119
Identity = 223/255 (87.45%), Postives = 236/255 (92.55%), Query Frame = 0


Query: 3   ISGISPTPGLCSCSHDQFTLGNRLSVLSLRFSRPYRTISPPGGGNFIGRPNFLVHFEPRT 62
           +SGISP   L  CSHD+FTL NRLS++SLRFSRPY   S PGGGN  GR NF VH EPR 
Sbjct: 1   MSGISPPAAL--CSHDKFTLPNRLSLVSLRFSRPYCATSLPGGGNRNGRANFFVHLEPRA 60

Query: 63  LLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVSDDEFSLAKVSFGVIGLGVGISLLSY 122
            LQKPQRLAFTFSARAAD+TQPSSVSASPDKAVV+DDEFSLAKVSFGVIGLGVGISLLSY
Sbjct: 61  PLQKPQRLAFTFSARAADTTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGISLLSY 120

Query: 123 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYSDAQKLRETCATPIL 182
           GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTY +AQKLRE+CATPIL
Sbjct: 121 GFGAYFNILPGSEWSAIMLTYGFPLAIIGMALKYAELKPVPCLTYLEAQKLRESCATPIL 180

Query: 183 KQVRDDVIRFRYGDEQHLDEALKRIFQYGMAGGIPRRSAPILQSIREEVIEDGKYCLVLV 242
           KQVRDDVIR+RYGDEQHLDEALKRIFQ+G+AGGIPRRSAPILQSIREEV EDGKYCLVL+
Sbjct: 181 KQVRDDVIRYRYGDEQHLDEALKRIFQFGLAGGIPRRSAPILQSIREEVTEDGKYCLVLM 240

Query: 243 FEAKALTLSDFEQRQ 258
           FEAKALTLSDFE+RQ
Sbjct: 241 FEAKALTLSDFEKRQ 253

The following BLAST results are available for this feature:

BLAST of Bhi06G000083 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38660.1	1.1e-81	76.77	acclimation of photosynthesis to environment	[more]
AT5G38660.2	1.1e-81	76.77	acclimation of photosynthesis to environment	[more]

BLAST of Bhi06G000083 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q55403	1.5e-17	39.87	Thylakoid membrane protein slr0575 OS=Synechocystis sp. (strain PCC 6803 / Kazus...	[more]

BLAST of Bhi06G000083 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDN5	9.3e-124	89.11	Thylakoid membrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A0A0KVX1	1.2e-123	88.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G644000 PE=4 SV=1	[more]
A0A1S3CAR1	3.6e-123	88.72	thylakoid membrane protein slr0575 OS=Cucumis melo OX=3656 GN=LOC103498589 PE=4 ...	[more]
A0A6J1GWV5	1.7e-120	88.24	uncharacterized protein LOC111458174 OS=Cucurbita moschata OX=3662 GN=LOC1114581...	[more]
A0A6J1JQQ4	1.8e-119	87.45	uncharacterized protein LOC111486968 OS=Cucurbita maxima OX=3661 GN=LOC111486968...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021275	Protein of unknown function DUF2854	PFAM	PF11016	DUF2854	coord: 122..258 e-value: 4.9E-41 score: 140.0
IPR021275	Protein of unknown function DUF2854	PANTHER	PTHR35551	FAMILY NOT NAMED	coord: 58..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi06M000083	Bhi06M000083	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane