Bhi05G001755 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001755
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	RWP-RK domain-containing protein
Location	chr5: 62376138 .. 62376629 (+)
RNA-Seq Expression	Bhi05G001755
Synteny	Bhi05G001755

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCTAGGAAACATTAACGCCCAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAATGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCCCTATCAAATAAATGGTGGGGAAGTAGCTGTCCAGATGAAACCAATAATGAAGAAGATGACAAACATCACTTCAAAGTAGTAAATGATGGTTTCACATCTTTAATAGACCCAGAGAAATCTGAAAGTATAGGGGAGGATCTCCAAGCTGATCTTCAGGGGACGCACCTGCTGACAGCTTTGAGAAAAAGAAGCGTGGTGAGAGGTCGAAAAGTACTAGAGCATGGTTATTATTCTCATGGACAAAGTTTAAACAAGTTAAGCAAGAAAGAACAGTCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAGTAACTCCTAA

mRNA sequence

ATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCTAGGAAACATTAACGCCCAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAATGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCCCTATCAAATAAATGGTGGGGAAGTAGCTGTCCAGATGAAACCAATAATGAAGAAGATGACAAACATCACTTCAAAGTAGTAAATGATGGTTTCACATCTTTAATAGACCCAGAGAAATCTGAAAGTATAGGGGAGGATCTCCAAGCTGATCTTCAGGGGACGCACCTGCTGACAGCTTTGAGAAAAAGAAGCGTGGTGAGAGGTCGAAAAGTACTAGAGCATGGTTATTATTCTCATGGACAAAGTTTAAACAAGTTAAGCAAGAAAGAACAGTCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAGTAACTCCTAA

Coding sequence (CDS)

ATGTCCAAACTAAATGGCGCTCCTCAAAGCTTGCAGCAGCTAGGAAACATTAACGCCCAGATGAGGCGTTCTCAGAATGTTCAAAGCACAAATTGGGTGCAAGGACCAATGAGTTTGGACGAGTTCAAGTATGGATTCCCCTCTGGTGGATTACCATCCCTATCAAATAAATGGTGGGGAAGTAGCTGTCCAGATGAAACCAATAATGAAGAAGATGACAAACATCACTTCAAAGTAGTAAATGATGGTTTCACATCTTTAATAGACCCAGAGAAATCTGAAAGTATAGGGGAGGATCTCCAAGCTGATCTTCAGGGGACGCACCTGCTGACAGCTTTGAGAAAAAGAAGCGTGGTGAGAGGTCGAAAAGTACTAGAGCATGGTTATTATTCTCATGGACAAAGTTTAAACAAGTTAAGCAAGAAAGAACAGTCATTGCTTCTAAACATATTCAGATCATCAACTCCAAATGAATGGATGAGTAACTCCTAA

Protein sequence

MSKLNGAPQSLQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSLSNKWWGSSCPDETNNEEDDKHHFKVVNDGFTSLIDPEKSESIGEDLQADLQGTHLLTALRKRSVVRGRKVLEHGYYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMSNS

Homology

[Close]

BLAST of Bhi05G001755 vs. TAIR 10
Match: AT1G06500.1 (unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 5.5e-12
Identity = 43/133 (32.33%), Postives = 68/133 (51.13%), Query Frame = 0


Query: 29  STNWVQGPMSLDEFKYGFPSGGLPSLSNKWWGSSCPDETNNEEDDKHHFKVVNDGFTSLI 88
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +   E    ED     +   +G  +  
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRA---EKGGREDGGG--ENTENGHVAAC 80

Query: 89  DPEKSESIGEDLQADLQGTHLLTALRKRSVVRGRKVLEHGYYSHGQSLNKLSKKEQSLLL 148
           D  ++                L A+RKR    GR+ +E G +  G    +  K++Q+LL 
Sbjct: 81  DETQNS---------------LVAIRKRIAEEGREAVELGLH-QGFGSKRPGKRDQALLF 132

Query: 149 NIFRSSTPNEWMS 162
            IF S+ P +W++
Sbjct: 141 QIFNSAMPKDWVT 132

[Close]

BLAST of Bhi05G001755 vs. TAIR 10
Match: AT1G06500.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 5.5e-12
Identity = 43/133 (32.33%), Postives = 68/133 (51.13%), Query Frame = 0


Query: 29  STNWVQGPMSLDEFKYGFPSGGLPSLSNKWWGSSCPDETNNEEDDKHHFKVVNDGFTSLI 88
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +   E    ED     +   +G  +  
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRA---EKGGREDGGG--ENTENGHVAAC 80

Query: 89  DPEKSESIGEDLQADLQGTHLLTALRKRSVVRGRKVLEHGYYSHGQSLNKLSKKEQSLLL 148
           D  ++                L A+RKR    GR+ +E G +  G    +  K++Q+LL 
Sbjct: 81  DETQNS---------------LVAIRKRIAEEGREAVELGLH-QGFGSKRPGKRDQALLF 132

Query: 149 NIFRSSTPNEWMS 162
            IF S+ P +W++
Sbjct: 141 QIFNSAMPKDWVT 132

[Close]

BLAST of Bhi05G001755 vs. TAIR 10
Match: AT1G06500.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 5.5e-12
Identity = 43/133 (32.33%), Postives = 68/133 (51.13%), Query Frame = 0


Query: 29  STNWVQGPMSLDEFKYGFPSGGLPSLSNKWWGSSCPDETNNEEDDKHHFKVVNDGFTSLI 88
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +   E    ED     +   +G  +  
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRA---EKGGREDGGG--ENTENGHVAAC 80

Query: 89  DPEKSESIGEDLQADLQGTHLLTALRKRSVVRGRKVLEHGYYSHGQSLNKLSKKEQSLLL 148
           D  ++                L A+RKR    GR+ +E G +  G    +  K++Q+LL 
Sbjct: 81  DETQNS---------------LVAIRKRIAEEGREAVELGLH-QGFGSKRPGKRDQALLF 132

Query: 149 NIFRSSTPNEWMS 162
            IF S+ P +W++
Sbjct: 141 QIFNSAMPKDWVT 132

[Close]

BLAST of Bhi05G001755 vs. TAIR 10
Match: AT1G06500.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 68.6 bits (166), Expect = 5.5e-12
Identity = 43/133 (32.33%), Postives = 68/133 (51.13%), Query Frame = 0


Query: 29  STNWVQGPMSLDEFKYGFPSGGLPSLSNKWWGSSCPDETNNEEDDKHHFKVVNDGFTSLI 88
           +TN  +   ++DEFK+GFPSGGL ++SNKWWG +   E    ED     +   +G  +  
Sbjct: 21  NTNLAKTVAAVDEFKFGFPSGGLTTVSNKWWGRA---EKGGREDGGG--ENTENGHVAAC 80

Query: 89  DPEKSESIGEDLQADLQGTHLLTALRKRSVVRGRKVLEHGYYSHGQSLNKLSKKEQSLLL 148
           D  ++                L A+RKR    GR+ +E G +  G    +  K++Q+LL 
Sbjct: 81  DETQNS---------------LVAIRKRIAEEGREAVELGLH-QGFGSKRPGKRDQALLF 132

Query: 149 NIFRSSTPNEWMS 162
            IF S+ P +W++
Sbjct: 141 QIFNSAMPKDWVT 132

[Close]

BLAST of Bhi05G001755 vs. ExPASy TrEMBL
Match: A0A6J1ERE4 (uncharacterized protein LOC111437021 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437021 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.4e-69
Identity = 135/163 (82.82%), Postives = 144/163 (88.34%), Query Frame = 0


Query: 1   MSKLNGAPQSLQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSLSNKWWG 60
           MSKLNG PQSLQ  GNINAQ+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPS+SNKWWG
Sbjct: 74  MSKLNGTPQSLQP-GNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWG 133

Query: 61  SSCPDETNNEEDDKHHFKVVNDGFTSLIDPEKSESIGEDLQADLQGTHLLTALRKRSVVR 120
           SSCPDETNNE DDKHHFKVVNDG  S+ID EKS SI EDLQADLQGTHLLTALRKRS+ R
Sbjct: 134 SSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLER 193

Query: 121 GRKVLEHGYYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMSNS 164
           GRKVL+HG   HG  LNKLSKKE+SLLLNIFRSS P+EW++NS
Sbjct: 194 GRKVLKHGNSFHGHGLNKLSKKERSLLLNIFRSSVPDEWINNS 235

[Close]

BLAST of Bhi05G001755 vs. ExPASy TrEMBL
Match: A0A6J1JJK7 (uncharacterized protein LOC111486389 OS=Cucurbita maxima OX=3661 GN=LOC111486389 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.3e-66
Identity = 134/166 (80.72%), Postives = 145/166 (87.35%), Query Frame = 0


Query: 1   MSKLNGAPQSLQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSLSNKWWG 60
           MSKLNG PQSLQ  GNINAQ+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPS+SNKWWG
Sbjct: 1   MSKLNGTPQSLQP-GNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWG 60

Query: 61  SSCPDETNNEEDDKHHFKVVNDGFTSLIDPEKSESIGEDLQADLQGTHLLTALRKRSVVR 120
           SSCPDETNNE  DKHHFKVVNDG  S+ID EKS SI EDLQADLQGTHLLTALRKRS+ R
Sbjct: 61  SSCPDETNNEVGDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLER 120

Query: 121 GRKVLEHG--YYSHG-QSLNKLSKKEQSLLLNIFRSSTPNEWMSNS 164
           GRKVL+HG  ++ HG   LNKLSKKE+SLLLNIFRSS P+EW++NS
Sbjct: 121 GRKVLKHGNSFHGHGLNKLNKLSKKERSLLLNIFRSSVPDEWINNS 165

[Close]

BLAST of Bhi05G001755 vs. ExPASy TrEMBL
Match: A0A6J1D407 (uncharacterized protein LOC111016830 OS=Momordica charantia OX=3673 GN=LOC111016830 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.1e-60
Identity = 129/166 (77.71%), Postives = 140/166 (84.34%), Query Frame = 0


Query: 1   MSKLNGAPQSL--QQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSLSNKW 60
           MSKLNGAPQSL  QQ GNINAQMRR Q+VQSTN VQG   L+EFKYGFPSGGLPSLSNKW
Sbjct: 1   MSKLNGAPQSLLQQQEGNINAQMRRPQHVQSTNLVQGSTMLNEFKYGFPSGGLPSLSNKW 60

Query: 61  WGSSCPDETNNEEDDKHHFK-VVNDGFTSLIDPEKSESIGEDLQADLQGTHLLTALRKRS 120
           WGSS PDETNNEED KH+FK VV DG  SLID EKSESI EDLQADL GT LLTALRKRS
Sbjct: 61  WGSSAPDETNNEEDAKHNFKNVVADGSISLIDQEKSESIEEDLQADLPGTRLLTALRKRS 120

Query: 121 VVRGRKVLEHGYYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMSNS 164
           + RGRK L++G Y H   +NKLSK+E+SLLLNIF+SS PNEW+SNS
Sbjct: 121 MERGRKALKNGSYFHAHGVNKLSKRERSLLLNIFKSSIPNEWISNS 166

[Close]

BLAST of Bhi05G001755 vs. ExPASy TrEMBL
Match: A0A6J1ER19 (uncharacterized protein LOC111437021 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111437021 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 9.9e-54
Identity = 109/127 (85.83%), Postives = 114/127 (89.76%), Query Frame = 0


Query: 1   MSKLNGAPQSLQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSLSNKWWG 60
           MSKLNG PQSLQ  GNINAQ+RR  NVQSTNWVQGP SLDEFKYGFPSGGLPS+SNKWWG
Sbjct: 74  MSKLNGTPQSLQP-GNINAQIRRPLNVQSTNWVQGPTSLDEFKYGFPSGGLPSISNKWWG 133

Query: 61  SSCPDETNNEEDDKHHFKVVNDGFTSLIDPEKSESIGEDLQADLQGTHLLTALRKRSVVR 120
           SSCPDETNNE DDKHHFKVVNDG  S+ID EKS SI EDLQADLQGTHLLTALRKRS+ R
Sbjct: 134 SSCPDETNNEVDDKHHFKVVNDGSASIIDQEKSGSIEEDLQADLQGTHLLTALRKRSLER 193

Query: 121 GRKVLEH 128
           GRKVL+H
Sbjct: 194 GRKVLKH 199

[Close]

BLAST of Bhi05G001755 vs. ExPASy TrEMBL
Match: A0A7N2MCY2 (RWP-RK domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 8.5e-29
Identity = 81/175 (46.29%), Postives = 108/175 (61.71%), Query Frame = 0


Query: 1   MSKLNGA--PQSLQQLGNINAQMRRSQNVQSTNWVQGPMSLDEFKYGFPSGGLPSLSNKW 60
           MSK  GA  P +LQQ G+ N Q  RSQN+ ST+  +G  +LDEFKYGFPS GL + SNKW
Sbjct: 149 MSKSKGAALPHNLQQQGSKNVQTLRSQNLLSTSLTKGIAALDEFKYGFPSNGLSTASNKW 208

Query: 61  WGSSCP--------DETNNEEDDKHHFK--VVNDGFTSLIDPEKSESIGEDLQADLQGTH 120
           WGSS P        D     EDDKH  +  VV+     ++D E+  +  ED     QGT 
Sbjct: 209 WGSSSPNGCEGKLGDGVETNEDDKHKSEEMVVDSPGVVIVDKEECVTGKEDSNIGPQGTG 268

Query: 121 LLTALRKRSVVRGRKVLEHGYYSHGQSLNKLSKKEQSLLLNIFRSSTPNEWMSNS 164
           LLT +RKR+V  GR+ L+ G +  G  +NK+ K+E++LLL IF+SS P +W++ S
Sbjct: 269 LLTTVRKRTVEEGREALKLGVF-RGYGINKIGKRERTLLLRIFKSSLPKQWINGS 322

The following BLAST results are available for this feature:

BLAST of Bhi05G001755 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06500.1	5.5e-12	32.33	unknown protein; Has 25 Blast hits to 25 proteins in 10 species: Archae - 0; Bac...	[more]
AT1G06500.2	5.5e-12	32.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06500.3	5.5e-12	32.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G06500.4	5.5e-12	32.33	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

BLAST of Bhi05G001755 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi05G001755 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERE4	8.4e-69	82.82	uncharacterized protein LOC111437021 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JJK7	2.3e-66	80.72	uncharacterized protein LOC111486389 OS=Cucurbita maxima OX=3661 GN=LOC111486389...	[more]
A0A6J1D407	1.1e-60	77.71	uncharacterized protein LOC111016830 OS=Momordica charantia OX=3673 GN=LOC111016...	[more]
A0A6J1ER19	9.9e-54	85.83	uncharacterized protein LOC111437021 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A7N2MCY2	8.5e-29	46.29	RWP-RK domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001755	Bhi05M001755	mRNA