Bhi05G001734 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001734
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Alum_res domain-containing protein
Location	chr5: 61727990 .. 61728280 (+)
RNA-Seq Expression	Bhi05G001734
Synteny	Bhi05G001734

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAACCCTGATTGCTTGGTGATGGTGGATAACTGTTATGAAGAATTTGTGGAAACCACCGAACCTCCAACTGTGGTAAGTGATCTCAGGCTTGTTTCTCCTGTTGATGGATAGCATTTCTATCAGTAATGGTTGGAAGGGCGCGGATTTAATTGCTGGAAGCTTGATAAAGAAAATCCTGGTGGAACAATTGCACCTTGTGGCGGATACGTTGCATGCCGAGACAAATGGGTGAAGGCGGCTGCAGCTCGTTTATGTGCACCCGCCTTGGGGGTGGATTCCTGGTGA

mRNA sequence

ATGCAAAACCCTGATTGCTTGGTGATGGTGGATAACTGTTATGAAGAATTTGTGGAAACCACCGAACCTCCAACTGTGCTTGATAAAGAAAATCCTGGTGGAACAATTGCACCTTGTGGCGGATACGTTGCATGCCGAGACAAATGGGTGAAGGCGGCTGCAGCTCGTTTATGTGCACCCGCCTTGGGGGTGGATTCCTGGTGA

Coding sequence (CDS)

ATGCAAAACCCTGATTGCTTGGTGATGGTGGATAACTGTTATGAAGAATTTGTGGAAACCACCGAACCTCCAACTGTGCTTGATAAAGAAAATCCTGGTGGAACAATTGCACCTTGTGGCGGATACGTTGCATGCCGAGACAAATGGGTGAAGGCGGCTGCAGCTCGTTTATGTGCACCCGCCTTGGGGGTGGATTCCTGGTGA

Protein sequence

MQNPDCLVMVDNCYEEFVETTEPPTVLDKENPGGTIAPCGGYVACRDKWVKAAAARLCAPALGVDSW

Homology

[Close]

BLAST of Bhi05G001734 vs. ExPASy Swiss-Prot
Match: P94479 (Uncharacterized protein YnbB OS=Bacillus subtilis (strain 168) OX=224308 GN=ynbB PE=4 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 2.1e-07
Identity = 28/68 (41.18%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 3   NPDCLVMVDNCYEEFVETTEPPTVLDK-------ENPGGTIAPCGGYVACRDKWVKAAAA 62
           N + +V VDNCY EFVE  EP  V          +NPGG +A  GGY+  + KW++A + 
Sbjct: 200 NENLIVFVDNCYGEFVEELEPCHVGADLMAGSLIKNPGGGLAKTGGYLVGKAKWIEACSY 259

Query: 63  RLCAPALG 64
           R+ +P +G
Sbjct: 260 RMTSPGIG 267

[Close]

BLAST of Bhi05G001734 vs. ExPASy Swiss-Prot
Match: P45624 (Uncharacterized 33.9 kDa protein in glnA 5'region OS=Lactobacillus delbrueckii subsp. bulgaricus OX=1585 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 5.2e-06
Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 3   NPDCLVMVDNCYEEFVETTEPPTV-LD------KENPGGTIAPCGGYVACRDKWVKAAAA 62
           +P+ LV VDNCY EF E  EP    +D       +N GG IA  GGY+  +++ V+ AA 
Sbjct: 85  SPESLVFVDNCYGEFSEKHEPTEYGVDFTAGSLIKNAGGGIAQTGGYIVGKEELVENAAI 144

Query: 63  RLCAPALG 64
           RL AP +G
Sbjct: 145 RLTAPGIG 152

[Close]

BLAST of Bhi05G001734 vs. ExPASy TrEMBL
Match: A0A6J1IFW4 (uncharacterized protein LOC111476877 OS=Cucurbita maxima OX=3661 GN=LOC111476877 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.2e-22
Identity = 56/73 (76.71%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MQNPDCLVMVDNCYEEFVETTEPPTVLDK-------ENPGGTIAPCGGYVACRDKWVKAA 60
           MQNPDCLVMVDNCY EFVET EPPTV          +NPGGT+APCGGYVA RDKWVKAA
Sbjct: 234 MQNPDCLVMVDNCYGEFVETIEPPTVGADLIAGSLIKNPGGTLAPCGGYVAGRDKWVKAA 293

Query: 61  AARLCAPALGVDS 67
           AARL AP LGVDS
Sbjct: 294 AARLSAPGLGVDS 306

[Close]

BLAST of Bhi05G001734 vs. ExPASy TrEMBL
Match: A0A6J1F5L5 (uncharacterized protein LOC111442579 OS=Cucurbita moschata OX=3662 GN=LOC111442579 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 9.2e-22
Identity = 56/73 (76.71%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MQNPDCLVMVDNCYEEFVETTEPPTVLDK-------ENPGGTIAPCGGYVACRDKWVKAA 60
           MQNPDCLVMVDNCY EFVET EPPTV          +NPGGT+APCGGYVA RDKWVKAA
Sbjct: 234 MQNPDCLVMVDNCYGEFVETIEPPTVGADLIAGSLIKNPGGTLAPCGGYVAGRDKWVKAA 293

Query: 61  AARLCAPALGVDS 67
           AARL AP LGVDS
Sbjct: 294 AARLSAPGLGVDS 306

[Close]

BLAST of Bhi05G001734 vs. ExPASy TrEMBL
Match: A0A6J1CEX2 (uncharacterized protein LOC111010605 OS=Momordica charantia OX=3673 GN=LOC111010605 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21
Identity = 55/72 (76.39%), Postives = 58/72 (80.56%), Query Frame = 0


Query: 2   QNPDCLVMVDNCYEEFVETTEPPTVLDK-------ENPGGTIAPCGGYVACRDKWVKAAA 61
           QNPDCLVMVDNCY EFVETTEPPTV          +NPGGT+APCGGYVA RDKWV+AAA
Sbjct: 235 QNPDCLVMVDNCYGEFVETTEPPTVGADLIAGSLIKNPGGTLAPCGGYVAGRDKWVRAAA 294

Query: 62  ARLCAPALGVDS 67
           ARL AP LGVDS
Sbjct: 295 ARLSAPGLGVDS 306

[Close]

BLAST of Bhi05G001734 vs. ExPASy TrEMBL
Match: A0A0A0LIM1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851810 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.0e-21
Identity = 55/73 (75.34%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 1   MQNPDCLVMVDNCYEEFVETTEPPTVLDK-------ENPGGTIAPCGGYVACRDKWVKAA 60
           MQNPDCLVMVDNCY EFVETTEPPTV          +NPGGT+APCGGY+A R KWVKAA
Sbjct: 236 MQNPDCLVMVDNCYGEFVETTEPPTVGADLIAGSLIKNPGGTLAPCGGYIAGRAKWVKAA 295

Query: 61  AARLCAPALGVDS 67
           AARL AP LGVDS
Sbjct: 296 AARLSAPGLGVDS 308

[Close]

BLAST of Bhi05G001734 vs. ExPASy TrEMBL
Match: A0A5A7SZV8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G001670 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 4.6e-21
Identity = 55/72 (76.39%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 1   MQNPDCLVMVDNCYEEFVETTEPPTVLDK-------ENPGGTIAPCGGYVACRDKWVKAA 60
           MQNPDCLVMVDNCY EFVETTEPPTV          +NPGGT+APCGGYVA R KWVKAA
Sbjct: 236 MQNPDCLVMVDNCYGEFVETTEPPTVGADLIAGSLIKNPGGTLAPCGGYVAGRAKWVKAA 295

Query: 61  AARLCAPALGVD 66
           AARL AP LGVD
Sbjct: 296 AARLSAPGLGVD 307

The following BLAST results are available for this feature:

BLAST of Bhi05G001734 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05G001734 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P94479	2.1e-07	41.18	Uncharacterized protein YnbB OS=Bacillus subtilis (strain 168) OX=224308 GN=ynbB...	[more]
P45624	5.2e-06	44.12	Uncharacterized 33.9 kDa protein in glnA 5'region OS=Lactobacillus delbrueckii s...	[more]

BLAST of Bhi05G001734 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IFW4	9.2e-22	76.71	uncharacterized protein LOC111476877 OS=Cucurbita maxima OX=3661 GN=LOC111476877...	[more]
A0A6J1F5L5	9.2e-22	76.71	uncharacterized protein LOC111442579 OS=Cucurbita moschata OX=3662 GN=LOC1114425...	[more]
A0A6J1CEX2	1.6e-21	76.39	uncharacterized protein LOC111010605 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A0A0LIM1	2.0e-21	75.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G851810 PE=4 SV=1	[more]
A0A5A7SZV8	4.6e-21	76.39	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009651	Putative methionine gamma-lyase	PFAM	PF06838	Met_gamma_lyase	coord: 2..64 e-value: 5.4E-17 score: 61.4
IPR009651	Putative methionine gamma-lyase	PANTHER	PTHR46658	FAMILY NOT NAMED	coord: 1..66
IPR015421	Pyridoxal phosphate-dependent transferase, major domain	GENE3D	3.40.640.10		coord: 1..66 e-value: 2.2E-15 score: 58.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001734	Bhi05M001734	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003824	catalytic activity