Bhi05G001614 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001614
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	pentatricopeptide repeat-containing protein At2g20710, mitochondrial
Location	chr5: 58788448 .. 58789014 (+)
RNA-Seq Expression	Bhi05G001614
Synteny	Bhi05G001614

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA

mRNA sequence

ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA

Coding sequence (CDS)

ATGAAACTGGATGATATCGACAGAGCTGAAAAAATCTTGAAGGAATGGGAATCATGGGATACATGTTTTGACTTTAAAATTTCGAACATGATGATAAATAGTTATTGTAAGAAGGGATTTGTGGATAAGGCAGAAGCATATATAAGCAGACTTATAGAGAATGGCAAGGAACCACAAGCAAACACTTGGGATCGACTAGCAAGTGGATATCATGCTAATGGTTTGACAAATAAAGCAGTAGAAACACTGAAGAAAGCAATCTCAGTTAGTCAACCTGGATGGAAGCCTAATTATCATACCTTGGCCGCATGTTTTGAATATTTGAAAACAAATGGAAATGTGGAGTTAGCAGAGGAAGTCCTAGGGCTCCTTCACAAACGTGATATTGTTCCCTTAAACATTTGCAATAGATTAGAAGATTATATCCACAGTGAAAACCAAACCTCAATCAAGTGCCCTGATCAACTCGGCTTGGAAGGTCGGAATAAGAGACTCAGTCACATGTCAGATCGAAACAAGCTCGACTTTGGGGAGCTAAAGTATGAGGAGACTTCTGATTGTAAGTGA

Protein sequence

MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQANTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEVLGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSDRNKLDFGELKYEETSDCK

Homology

[Close]

BLAST of Bhi05G001614 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 8.2e-28
Identity = 53/127 (41.73%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+DDI+  EKI++EWE+  + FD +I +++I  YCKKG ++KAE  ++ L++  +    
Sbjct: 326 LKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDT 385

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           +TW+RLA GY   G   KAVE  K+AI VS+PGW+P+   L +C +YL+   ++E   ++
Sbjct: 386 STWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKI 445

Query: 121 LGLLHKR 128
           L LL +R
Sbjct: 446 LRLLSER 452

[Close]

BLAST of Bhi05G001614 vs. TAIR 10
Match: AT2G20710.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 8.2e-28
Identity = 53/127 (41.73%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+DDI+  EKI++EWE+  + FD +I +++I  YCKKG ++KAE  ++ L++  +    
Sbjct: 231 LKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDT 290

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           +TW+RLA GY   G   KAVE  K+AI VS+PGW+P+   L +C +YL+   ++E   ++
Sbjct: 291 STWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKI 350

Query: 121 LGLLHKR 128
           L LL +R
Sbjct: 351 LRLLSER 357

[Close]

BLAST of Bhi05G001614 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 6.7e-14
Identity = 37/127 (29.13%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +++ DI+ AEK+ +EW    + +D +I N+++N+Y K   ++ AE     ++E G +P +
Sbjct: 356 VRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSS 415

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISV-SQPGWKPNYHTLAACFEYLKTNGNVELAEE 120
           +TW+ LA G+      ++A+  L+ A S      W+P    L+  F+  +   +V   E 
Sbjct: 416 STWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEA 475

Query: 121 VLGLLHK 127
           VL LL +
Sbjct: 476 VLELLRQ 482

[Close]

BLAST of Bhi05G001614 vs. TAIR 10
Match: AT4G21705.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 6.7e-14
Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+D +  AE++L EW+S   C+DF++ N +I  Y  K   +KAEA +  L   GK    
Sbjct: 313 VKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTP 372

Query: 61  NTWDRLASGYHANGLTNKAVETLKKA--ISVSQPGWKPNYHTLAACFEYLKTNGNVELAE 120
            +W+ +A+ Y   G    A + +K A  + V    W+P    + +   ++   G+++  E
Sbjct: 373 ESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVE 432

Query: 121 EVLGLL 125
             +  L
Sbjct: 433 SFVASL 438

[Close]

BLAST of Bhi05G001614 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 73.2 bits (178), Expect = 2.6e-13
Identity = 37/127 (29.13%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +KL+D+  AE + KEW++  + +D +I N++I +Y ++G + KA     +    G +  A
Sbjct: 310 VKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNA 369

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPG---WKPNYHTLAACFEYLKTNGNVELA 120
            TW+     Y  +G   +A+E + KA+S+ +     W P+  T+ A   Y +   +V  A
Sbjct: 370 KTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGA 429

Query: 121 EEVLGLL 125
           E +L +L
Sbjct: 430 ENLLEIL 436

[Close]

BLAST of Bhi05G001614 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-26
Identity = 53/127 (41.73%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+DDI+  EKI++EWE+  + FD +I +++I  YCKKG ++KAE  ++ L++  +    
Sbjct: 326 LKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDT 385

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           +TW+RLA GY   G   KAVE  K+AI VS+PGW+P+   L +C +YL+   ++E   ++
Sbjct: 386 STWERLALGYKMAGKMEKAVEKWKRAIEVSKPGWRPHQVVLMSCVDYLEGQRDMEGLRKI 445

Query: 121 LGLLHKR 128
           L LL +R
Sbjct: 446 LRLLSER 452

[Close]

BLAST of Bhi05G001614 vs. ExPASy Swiss-Prot
Match: Q84JR3 (Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g21705 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 9.5e-13
Identity = 35/126 (27.78%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K+D +  AE++L EW+S   C+DF++ N +I  Y  K   +KAEA +  L   GK    
Sbjct: 313 VKIDALVEAEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTP 372

Query: 61  NTWDRLASGYHANGLTNKAVETLKKA--ISVSQPGWKPNYHTLAACFEYLKTNGNVELAE 120
            +W+ +A+ Y   G    A + +K A  + V    W+P    + +   ++   G+++  E
Sbjct: 373 ESWELVATAYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVE 432

Query: 121 EVLGLL 125
             +  L
Sbjct: 433 SFVASL 438

[Close]

BLAST of Bhi05G001614 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 9.5e-13
Identity = 37/127 (29.13%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +++ DI+ AEK+ +EW    + +D +I N+++N+Y K   ++ AE     ++E G +P +
Sbjct: 356 VRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSS 415

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISV-SQPGWKPNYHTLAACFEYLKTNGNVELAEE 120
           +TW+ LA G+      ++A+  L+ A S      W+P    L+  F+  +   +V   E 
Sbjct: 416 STWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEA 475

Query: 121 VLGLLHK 127
           VL LL +
Sbjct: 476 VLELLRQ 482

[Close]

BLAST of Bhi05G001614 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.6e-12
Identity = 37/127 (29.13%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +KL+D+  AE + KEW++  + +D +I N++I +Y ++G + KA     +    G +  A
Sbjct: 310 VKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNA 369

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPG---WKPNYHTLAACFEYLKTNGNVELA 120
            TW+     Y  +G   +A+E + KA+S+ +     W P+  T+ A   Y +   +V  A
Sbjct: 370 KTWEIFMDYYVKSGDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGA 429

Query: 121 EEVLGLL 125
           E +L +L
Sbjct: 430 ENLLEIL 436

[Close]

BLAST of Bhi05G001614 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.7e-12
Identity = 34/133 (25.56%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           +K  D++ AE++  EWE+    +D ++SN+++ +Y + G + KAE+    ++E G  P  
Sbjct: 330 VKTGDLEEAERVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNY 389

Query: 61  NTWDRLASGYHANGLTNKAVETLKKA-ISVSQPGWKPNYHTLAACFEYLKTNGNVELAEE 120
            TW+ L  G+       KA++ + +  + + +  W+P+++ + A  EY +    +E A  
Sbjct: 390 KTWEILMEGWVKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATA 449

Query: 121 VLGLLHKRDIVPL 133
            +  LH+  +  L
Sbjct: 450 YVRDLHRLGLASL 462

[Close]

BLAST of Bhi05G001614 vs. ExPASy TrEMBL
Match: A0A6J1D3H6 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111016662 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-74
Identity = 140/186 (75.27%), Postives = 158/186 (84.95%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDI+ AEKILKEWES DTCFDFKI NMMIN YC+KG VDKAEAYISRL+E+GKEPQA
Sbjct: 325 MKLDDIEGAEKILKEWESGDTCFDFKIPNMMINIYCRKGLVDKAEAYISRLMESGKEPQA 384

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           NTWDRLA+GYHANG T KAVET+KKAIS SQPGWKPN HTLAAC E+LKTN NVE+AEE+
Sbjct: 385 NTWDRLATGYHANGQTMKAVETIKKAISASQPGWKPNDHTLAACLEFLKTNENVEVAEEI 444

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSDRNKLDFGELK 180
           + LL K DIV + IC+ L DY+HSE QTS    DQLGL+G+ +R +H SDRNKLD  E+K
Sbjct: 445 IRLLRKHDIVSIRICDGLVDYVHSEIQTS-SALDQLGLDGQIERHNHASDRNKLDIAEVK 504

Query: 181 YEETSD 187
           YEETSD
Sbjct: 505 YEETSD 509

[Close]

BLAST of Bhi05G001614 vs. ExPASy TrEMBL
Match: A0A5A7SQP0 (Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003480 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 7.2e-72
Identity = 134/170 (78.82%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1    MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
            MKLDDID AE+ILKEWES DTCFDF+I NMMINSYC KGF+DKAEAYISRLIENGKEP+A
Sbjct: 854  MKLDDIDGAERILKEWESGDTCFDFRIPNMMINSYCTKGFMDKAEAYISRLIENGKEPRA 913

Query: 61   NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
              WDRL SGYH+NGLTNKA ETLKKAISVS P WKPN H +AAC EYLKTNGNVELAEE+
Sbjct: 914  FAWDRLVSGYHSNGLTNKAAETLKKAISVSPPRWKPNNHIVAACLEYLKTNGNVELAEEI 973

Query: 121  LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
            +GLL K DI P NICNRLEDYIHSENQTSIKC D L L+G+++ L H  D
Sbjct: 974  IGLLCKGDIFPSNICNRLEDYIHSENQTSIKCLDLLDLKGQSEGLDHELD 1023

[Close]

BLAST of Bhi05G001614 vs. ExPASy TrEMBL
Match: A0A0A0K3R7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047440 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 9.3e-72
Identity = 135/163 (82.82%), Postives = 143/163 (87.73%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYISRLIENGKEP+A
Sbjct: 324 MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYISRLIENGKEPRA 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             WDRLASGYH+NGLTNKA ETLKKAISVS P WKPNY  LAAC EYLKTNGNVELAEE+
Sbjct: 384 YAWDRLASGYHSNGLTNKAAETLKKAISVSPPRWKPNYDILAACLEYLKTNGNVELAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNK 164
           +GLL KRDI PLNIC RLEDYIHSENQ SIKC D LGL+ +N+
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIHSENQNSIKCLDLLGLKDQNE 486

[Close]

BLAST of Bhi05G001614 vs. ExPASy TrEMBL
Match: A0A1S4E0B6 (pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103495690 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.2e-71
Identity = 133/170 (78.24%), Postives = 146/170 (85.88%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DTCFDF+I NMMINSYC KGF+DKAEAYISRLIENGKEP+A
Sbjct: 364 MKLDDIDGAERILKEWESGDTCFDFRIPNMMINSYCTKGFMDKAEAYISRLIENGKEPRA 423

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
             WDRL SGYH+NGLTNKA ET+KKAISVS P WKPN H +AAC EYLKTNGNVELAEE+
Sbjct: 424 FAWDRLVSGYHSNGLTNKAAETMKKAISVSPPRWKPNNHIVAACLEYLKTNGNVELAEEI 483

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
           +GLL K DI P NICNRLEDYIHSENQTSIKC D L L+G+++ L H  D
Sbjct: 484 IGLLCKGDIFPSNICNRLEDYIHSENQTSIKCLDLLDLKGQSEGLDHELD 533

[Close]

BLAST of Bhi05G001614 vs. ExPASy TrEMBL
Match: A0A0A0K1S9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047450 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 3.0e-70
Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0


Query: 1   MKLDDIDRAEKILKEWESWDTCFDFKISNMMINSYCKKGFVDKAEAYISRLIENGKEPQA 60
           MKLDDID AE+ILKEWES DT FDFKI NMMINSYC KGFVDKAEAYI+RLIE GKEP+A
Sbjct: 324 MKLDDIDGAERILKEWESGDTSFDFKIPNMMINSYCTKGFVDKAEAYINRLIETGKEPEA 383

Query: 61  NTWDRLASGYHANGLTNKAVETLKKAISVSQPGWKPNYHTLAACFEYLKTNGNVELAEEV 120
           NTWD LASGYH+NGLTNK  ETLKKAISVS P WKP YH LAAC EYLKTN NV+LAEE+
Sbjct: 384 NTWDLLASGYHSNGLTNKVAETLKKAISVSPPHWKPKYHILAACLEYLKTNENVDLAEEI 443

Query: 121 LGLLHKRDIVPLNICNRLEDYIHSENQTSIKCPDQLGLEGRNKRLSHMSD 171
           +GLL KRDI PLNIC RLEDYI SENQ SIKC D LGL+G+N+    + D
Sbjct: 444 IGLLCKRDIFPLNICKRLEDYIRSENQNSIKCLDLLGLKGQNEEPDQVLD 493

The following BLAST results are available for this feature:

BLAST of Bhi05G001614 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20710.1	8.2e-28	41.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G20710.2	8.2e-28	41.73	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G02150.1	6.7e-14	29.13	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G21705.1	6.7e-14	27.78	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G60770.1	2.6e-13	29.13	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

BLAST of Bhi05G001614 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKU6	1.2e-26	41.73	Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop...	[more]
Q84JR3	9.5e-13	27.78	Pentatricopeptide repeat-containing protein At4g21705, mitochondrial OS=Arabidop...	[more]
Q8LPS6	9.5e-13	29.13	Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX...	[more]
O22714	3.6e-12	29.13	Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX...	[more]
Q3E911	4.7e-12	25.56	Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX...	[more]

BLAST of Bhi05G001614 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3H6	4.5e-74	75.27	pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Momordic...	[more]
A0A5A7SQP0	7.2e-72	78.82	Putative pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa...	[more]
A0A0A0K3R7	9.3e-72	82.82	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047440 PE=4 SV=1	[more]
A0A1S4E0B6	1.2e-71	78.24	pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like OS=Cuc...	[more]
A0A0A0K1S9	3.0e-70	77.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047450 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 29..55 e-value: 2.3E-5 score: 24.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 29..58 e-value: 5.2E-6 score: 24.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 24..58 score: 10.248873
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..180 e-value: 1.5E-17 score: 66.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 7..108
None	No IPR available	PANTHER	PTHR45717:SF10	OS10G0501200 PROTEIN	coord: 1..149
None	No IPR available	PANTHER	PTHR45717	OS12G0527900 PROTEIN	coord: 1..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001614	Bhi05M001614	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding