Bhi05G001572 (gene) Wax gourd (B227) v1

Overview
NameBhi05G001572
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionWound-responsive family protein
Locationchr5: 57526233 .. 57526871 (+)
RNA-Seq ExpressionBhi05G001572
SyntenyBhi05G001572
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCCATCAAAATCAAGAATCACAAAACTTACACAACCGAACAAGTAAAAGAAAGAGGAAAACGAAAACATGAGTTCATCAAGAAGAGCTTGGATTGTAGCCGCCAGTGTGGGCGTCGTGGAAGCCTTGAAGGATCAAGGAATTTGCCGATGGAATCAGAGCATTAGATCCGCCCATCAATACGCCAAAAACCATGTCAGATCGGTGCCTCAGGCCACCAGATTGACTGGCTCTTCCGCCGCCGTGGTTTCTGGCAAGCAACAGCAGAAGCAATCGGAAGAATCTTTAAGAACGGTCATGTATTTGAGCTGTTGGGGTCCCAATTAAAAGTTCTTGATCTTTAAGAATTCAGCTAAATGGATGATATAGATTTAATTTCAAAAAAATAAAAATCAAAAATCAAATTATTACCGAATGAAGCCAGCCCACCGCCGCCGGAGATGCTGCTGCGAAGTTTTTTATCCAAGTCGCCGTGGCGTTGGGCGAAAAAATCGCCGGTTGGGGATTTGTGTTATAGCGATGTATATGAATTGGGTATATGGTGCTAATGGAAATCAAACAATTACGGATACTTGTTTTCTCCCCTTTTTCTTTACAGCAATTTTAATTTCTTGTTCATCCACCAAGAAGTAAAGATGCA

mRNA sequence

CTCCATCAAAATCAAGAATCACAAAACTTACACAACCGAACAAGTAAAAGAAAGAGGAAAACGAAAACATGAGTTCATCAAGAAGAGCTTGGATTGTAGCCGCCAGTGTGGGCGTCGTGGAAGCCTTGAAGGATCAAGGAATTTGCCGATGGAATCAGAGCATTAGATCCGCCCATCAATACGCCAAAAACCATGTCAGATCGGTGCCTCAGGCCACCAGATTGACTGGCTCTTCCGCCGCCGTGGTTTCTGGCAAGCAACAGCAGAAGCAATCGGAAGAATCTTTAAGAACGGTCATGTATTTGAGCTGTTGGGGTCCCAATTAAAAGTTCTTGATCTTTAAGAATTCAGCTAAATGGATGATATAGATTTAATTTCAAAAAAATAAAAATCAAAAATCAAATTATTACCGAATGAAGCCAGCCCACCGCCGCCGGAGATGCTGCTGCGAAGTTTTTTATCCAAGTCGCCGTGGCGTTGGGCGAAAAAATCGCCGGTTGGGGATTTGTGTTATAGCGATGTATATGAATTGGGTATATGGTGCTAATGGAAATCAAACAATTACGGATACTTGTTTTCTCCCCTTTTTCTTTACAGCAATTTTAATTTCTTGTTCATCCACCAAGAAGTAAAGATGCA

Coding sequence (CDS)

ATGAGTTCATCAAGAAGAGCTTGGATTGTAGCCGCCAGTGTGGGCGTCGTGGAAGCCTTGAAGGATCAAGGAATTTGCCGATGGAATCAGAGCATTAGATCCGCCCATCAATACGCCAAAAACCATGTCAGATCGGTGCCTCAGGCCACCAGATTGACTGGCTCTTCCGCCGCCGTGGTTTCTGGCAAGCAACAGCAGAAGCAATCGGAAGAATCTTTAAGAACGGTCATGTATTTGAGCTGTTGGGGTCCCAATTAA

Protein sequence

MSSSRRAWIVAASVGVVEALKDQGICRWNQSIRSAHQYAKNHVRSVPQATRLTGSSAAVVSGKQQQKQSEESLRTVMYLSCWGPN
Homology
BLAST of Bhi05G001572 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-23
Identity = 53/86 (61.63%), Postives = 68/86 (79.07%), Query Frame = 0

Query: 1  MSSSRRAWIVAASVGVVEALKDQ-GICRWNQSIRSAHQYAKNHVRSVPQATRLTGSSAAV 60
          MSS+ + W+VAAS+G VEALKDQ G+CRWN  IRSA+QY +N++RSV QA +L+ SS   
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSS--- 60

Query: 61 VSGKQQQKQSEESLRTVMYLSCWGPN 86
          +    + KQ+EESLRTVMYLSCWGP+
Sbjct: 61 IDYTNKTKQAEESLRTVMYLSCWGPS 83

BLAST of Bhi05G001572 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 102.4 bits (254), Expect = 1.8e-22
Identity = 54/90 (60.00%), Postives = 68/90 (75.56%), Query Frame = 0

Query: 1  MSSSRRAWIVAASVGVVEALKDQ-GICRWNQSIRSAHQYAKNHVRSVPQATRLTGS--SA 60
          MSS+ +AW VA S+G VEALKDQ G+CRWN  +RS +Q+ +N+VRSV Q  R + S  SA
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 AVVSG--KQQQKQSEESLRTVMYLSCWGPN 86
          AV S    ++ K++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

BLAST of Bhi05G001572 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 53.5 bits (127), Expect = 9.5e-08
Identity = 29/88 (32.95%), Postives = 43/88 (48.86%), Query Frame = 0

Query: 2  SSSRRAWIVAASVGVVEALKDQGICRWNQSIRSAHQYAKNHVRSV-----PQATRLTGSS 61
          +  + +W VA ++  VE LKDQG+ RWN   R  H+ A   VR++     P     + S+
Sbjct: 3  AGKQASWAVATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSA 62

Query: 62 AAVVSGKQQQKQSEESLRTVMYLSCWGP 85
           ++ S        E S    M LSC+GP
Sbjct: 63 TSIRSKPLSTTPFETSFEKAMGLSCFGP 90

BLAST of Bhi05G001572 vs. ExPASy TrEMBL
Match: A0A5D3C6J9 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003730 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.8e-37
Identity = 80/85 (94.12%), Postives = 82/85 (96.47%), Query Frame = 0

Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNQSIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWN +IRSAHQYA+NHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SGKQQQKQSEESLRTVMYLSCWGPN 86
          S K QQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

BLAST of Bhi05G001572 vs. ExPASy TrEMBL
Match: A0A1S3C1F8 (uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 9.8e-37
Identity = 80/85 (94.12%), Postives = 82/85 (96.47%), Query Frame = 0

Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNQSIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWN +IRSAHQYA+NHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYARNHVRSVPQATRLTGSSAAVV 60

Query: 61 SGKQQQKQSEESLRTVMYLSCWGPN 86
          S K QQKQSEESLRTVMYLSCWGPN
Sbjct: 61 SSKPQQKQSEESLRTVMYLSCWGPN 85

BLAST of Bhi05G001572 vs. ExPASy TrEMBL
Match: A0A0A0K296 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046660 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.0e-30
Identity = 72/75 (96.00%), Postives = 73/75 (97.33%), Query Frame = 0

Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNQSIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAWIVAASVGVVEALKDQGICRWN +IRSAHQYAKNHVRSVPQATRLTGSSAAVV
Sbjct: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNHTIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60

Query: 61 SGKQQQKQSEESLRT 76
          S KQQQKQSEESLRT
Sbjct: 61 SSKQQQKQSEESLRT 75

BLAST of Bhi05G001572 vs. ExPASy TrEMBL
Match: A0A6J1HXF9 (uncharacterized protein LOC111468355 OS=Cucurbita maxima OX=3661 GN=LOC111468355 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.4e-28
Identity = 66/85 (77.65%), Postives = 74/85 (87.06%), Query Frame = 0

Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNQSIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAW+VAASVGVVEALKDQG+CRWN +I+S  QYAKNHVRSV QA +L+ +S A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHTIKSVQQYAKNHVRSVSQAKKLSSTSTAAV 60

Query: 61 SGKQQQKQSEESLRTVMYLSCWGPN 86
          S  Q+ KQSEESLRTVMYLSCWGPN
Sbjct: 61 S-DQKWKQSEESLRTVMYLSCWGPN 84

BLAST of Bhi05G001572 vs. ExPASy TrEMBL
Match: A0A6J1GJQ8 (uncharacterized protein LOC111454919 OS=Cucurbita moschata OX=3662 GN=LOC111454919 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-27
Identity = 66/85 (77.65%), Postives = 73/85 (85.88%), Query Frame = 0

Query: 1  MSSSRRAWIVAASVGVVEALKDQGICRWNQSIRSAHQYAKNHVRSVPQATRLTGSSAAVV 60
          MSSSRRAW+VAASVGVVEALKDQG+CRWN +I+S  QYAKNHVRSV QA +L+  S A V
Sbjct: 1  MSSSRRAWVVAASVGVVEALKDQGVCRWNHAIKSVQQYAKNHVRSVSQAKKLSSPSTAAV 60

Query: 61 SGKQQQKQSEESLRTVMYLSCWGPN 86
          S  Q+ KQSEESLRTVMYLSCWGPN
Sbjct: 61 S-DQKWKQSEESLRTVMYLSCWGPN 84

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G10265.12.1e-2361.63Wound-responsive family protein [more]
AT4G10270.11.8e-2260.00Wound-responsive family protein [more]
AT4G33560.19.5e-0832.95Wound-responsive family protein [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C6J99.8e-3794.12Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3C1F89.8e-3794.12uncharacterized protein LOC103495543 OS=Cucumis melo OX=3656 GN=LOC103495543 PE=... [more]
A0A0A0K2964.0e-3096.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046660 PE=4 SV=1[more]
A0A6J1HXF96.4e-2877.65uncharacterized protein LOC111468355 OS=Cucurbita maxima OX=3661 GN=LOC111468355... [more]
A0A6J1GJQ81.1e-2777.65uncharacterized protein LOC111454919 OS=Cucurbita moschata OX=3662 GN=LOC1114549... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022251Protein of unknown function wound-inducedPFAMPF12609DUF3774coord: 10..84
e-value: 7.4E-32
score: 110.2
IPR022251Protein of unknown function wound-inducedPANTHERPTHR33090DUF3774 DOMAIN PROTEIN-RELATEDcoord: 1..85
NoneNo IPR availablePANTHERPTHR33090:SF50FAMILY PROTEIN, PUTATIVE-RELATEDcoord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M001572Bhi05M001572mRNA