Bhi05G001395 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001395
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	expansin-like A2
Location	chr5: 53371685 .. 53371906 (-)
RNA-Seq Expression	Bhi05G001395
Synteny	Bhi05G001395

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGTGGAAGAATCAAGTTACAATCCATTCAAGTTGGCAATAAAATACTTCTACCAAGGTGGCCAAACAGACATGGTTGCTGTTGATATTGCTCAAATTGGGACCTCAGATTGGAGCCATATGAAGAGAAGTTATGGAGCTGTTTGGGAAACAGACAATGTACCTGAAGGTGCATTACAATTGAGAATGGTGGTGACTTCTGGATACGATGGAAAATAG

mRNA sequence

ATGAGAGTGGAAGAATCAAGTTACAATCCATTCAAGTTGGCAATAAAATACTTCTACCAAGGTGGCCAAACAGACATGGTTGCTGTTGATATTGCTCAAATTGGGACCTCAGATTGGAGCCATATGAAGAGAAGTTATGGAGCTGTTTGGGAAACAGACAATGTACCTGAAGGTGCATTACAATTGAGAATGGTGGTGACTTCTGGATACGATGGAAAATAG

Coding sequence (CDS)

ATGAGAGTGGAAGAATCAAGTTACAATCCATTCAAGTTGGCAATAAAATACTTCTACCAAGGTGGCCAAACAGACATGGTTGCTGTTGATATTGCTCAAATTGGGACCTCAGATTGGAGCCATATGAAGAGAAGTTATGGAGCTGTTTGGGAAACAGACAATGTACCTGAAGGTGCATTACAATTGAGAATGGTGGTGACTTCTGGATACGATGGAAAATAG

Protein sequence

MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGALQLRMVVTSGYDGK

Homology

[Close]

BLAST of Bhi05G001395 vs. TAIR 10
Match: AT4G38400.1 (expansin-like A2 )

HSP 1 Score: 110.2 bits (274), Expect = 7.3e-25
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGAL 60
           +RVEESS NP  LAIK  YQGGQT++VA+ IAQ+G+S WS+M RS+GAVW TD VP GAL
Sbjct: 152 VRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDKVPNGAL 211

Query: 61  QLRMVVTSGYDGK 74
           Q R VVT+GYDGK
Sbjct: 212 QFRFVVTAGYDGK 224

[Close]

BLAST of Bhi05G001395 vs. TAIR 10
Match: AT3G45960.1 (expansin-like A3 )

HSP 1 Score: 104.0 bits (258), Expect = 5.2e-23
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGAL 60
           +RVEE+S  P  LAIK  YQGGQT++V +DIA +G+S WS+M RS+GAVW TD VP GAL
Sbjct: 103 VRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGAL 162

Query: 61  QLRMVVTSGYDGK 74
           Q +  VT GYDGK
Sbjct: 163 QFKFTVTGGYDGK 175

[Close]

BLAST of Bhi05G001395 vs. TAIR 10
Match: AT3G45960.2 (expansin-like A3 )

HSP 1 Score: 104.0 bits (258), Expect = 5.2e-23
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGAL 60
           +RVEE+S  P  LAIK  YQGGQT++V +DIA +G+S WS+M RS+GAVW TD VP GAL
Sbjct: 151 VRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGAL 210

Query: 61  QLRMVVTSGYDGK 74
           Q +  VT GYDGK
Sbjct: 211 QFKFTVTGGYDGK 223

[Close]

BLAST of Bhi05G001395 vs. TAIR 10
Match: AT3G45970.1 (expansin-like A1 )

HSP 1 Score: 100.1 bits (248), Expect = 7.6e-22
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTS-DWSHMKRSYGAVWETDNVPEGA 60
           +RVEE+S  P  L IK  YQGGQT++V++DIAQ+G+S +W +M RS+GAVW TD VP GA
Sbjct: 151 VRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTGA 210

Query: 61  LQLRMVVTSGYDGK 74
           +Q R VVT GYDGK
Sbjct: 211 IQFRFVVTGGYDGK 224

[Close]

BLAST of Bhi05G001395 vs. TAIR 10
Match: AT4G17030.1 (expansin-like B1 )

HSP 1 Score: 63.2 bits (152), Expect = 1.0e-10
Identity = 28/65 (43.08%), Postives = 39/65 (60.00%), Query Frame = 0


Query: 2   RVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGALQ 61
           ++ E SYNP  LAI   Y GG  D++AV++ Q    +W  M+R +GAV +  N P G L 
Sbjct: 154 KIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLT 213

Query: 62  LRMVV 67
           LR +V
Sbjct: 214 LRFLV 218

[Close]

BLAST of Bhi05G001395 vs. ExPASy Swiss-Prot
Match: Q9SVE5 (Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.0e-23
Identity = 51/73 (69.86%), Postives = 60/73 (82.19%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGAL 60
           +RVEESS NP  LAIK  YQGGQT++VA+ IAQ+G+S WS+M RS+GAVW TD VP GAL
Sbjct: 152 VRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDKVPNGAL 211

Query: 61  QLRMVVTSGYDGK 74
           Q R VVT+GYDGK
Sbjct: 212 QFRFVVTAGYDGK 224

[Close]

BLAST of Bhi05G001395 vs. ExPASy Swiss-Prot
Match: Q9LZT5 (Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 7.4e-22
Identity = 46/73 (63.01%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGAL 60
           +RVEE+S  P  LAIK  YQGGQT++V +DIA +G+S WS+M RS+GAVW TD VP GAL
Sbjct: 151 VRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGAL 210

Query: 61  QLRMVVTSGYDGK 74
           Q +  VT GYDGK
Sbjct: 211 QFKFTVTGGYDGK 223

[Close]

BLAST of Bhi05G001395 vs. ExPASy Swiss-Prot
Match: Q9LZT4 (Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-20
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTS-DWSHMKRSYGAVWETDNVPEGA 60
           +RVEE+S  P  L IK  YQGGQT++V++DIAQ+G+S +W +M RS+GAVW TD VP GA
Sbjct: 151 VRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTGA 210

Query: 61  LQLRMVVTSGYDGK 74
           +Q R VVT GYDGK
Sbjct: 211 IQFRFVVTGGYDGK 224

[Close]

BLAST of Bhi05G001395 vs. ExPASy Swiss-Prot
Match: Q8H274 (Expansin-like A3 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA3 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.4e-20
Identity = 44/71 (61.97%), Postives = 50/71 (70.42%), Query Frame = 0


Query: 3   VEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGALQL 62
           VEE S  P  L IK+ YQGGQTD++AVD+AQ+G+SDW  M R YG VW  D  P G LQ 
Sbjct: 164 VEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDWRFMTRVYGPVWSIDRAPNGPLQF 223

Query: 63  RMVVTSGYDGK 74
           R VVT GYDGK
Sbjct: 224 RAVVTGGYDGK 234

[Close]

BLAST of Bhi05G001395 vs. ExPASy Swiss-Prot
Match: Q7XCL0 (Expansin-like A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA2 PE=2 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 6.9e-20
Identity = 42/73 (57.53%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGAL 60
           +RVEE S  P +L+I++ YQGGQTD+VAVD+A +G+S+W  M R YG  W T   P G L
Sbjct: 161 IRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAWSTAQAPAGPL 220

Query: 61  QLRMVVTSGYDGK 74
           Q R+VVT GYDGK
Sbjct: 221 QFRVVVTGGYDGK 233

[Close]

BLAST of Bhi05G001395 vs. ExPASy TrEMBL
Match: A0A6J1HZC5 (expansin-like A2 OS=Cucurbita maxima OX=3661 GN=LOC111468285 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.7e-34
Identity = 68/73 (93.15%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGAL 60
           +RVEESSYNPFKLAIK+FYQGGQTDM+AVD+AQ+GTSDWSHMKRSYGAVWETDNVPEGAL
Sbjct: 147 VRVEESSYNPFKLAIKFFYQGGQTDMIAVDVAQVGTSDWSHMKRSYGAVWETDNVPEGAL 206

Query: 61  QLRMVVTSGYDGK 74
           QLRMVVTSGYDGK
Sbjct: 207 QLRMVVTSGYDGK 219

[Close]

BLAST of Bhi05G001395 vs. ExPASy TrEMBL
Match: A0A6J1GKS8 (expansin-like A2 OS=Cucurbita moschata OX=3662 GN=LOC111455268 PE=3 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 8.7e-34
Identity = 68/73 (93.15%), Postives = 73/73 (100.00%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGAL 60
           +RVEESSYNPFKLAIK+FYQGGQTDM+AVD+AQ+GTSDWSHMKRSYGAVWETDNVPEGAL
Sbjct: 147 VRVEESSYNPFKLAIKFFYQGGQTDMIAVDVAQVGTSDWSHMKRSYGAVWETDNVPEGAL 206

Query: 61  QLRMVVTSGYDGK 74
           QLRMVVTSGYDGK
Sbjct: 207 QLRMVVTSGYDGK 219

[Close]

BLAST of Bhi05G001395 vs. ExPASy TrEMBL
Match: A0A1S3BHW6 (Expansin A7-like protein OS=Cucumis melo OX=3656 GN=LOC107990293 PE=2 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.4e-33
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGAL 60
           +RVEESSYNPFKLAIK+ YQGGQT+MVAVDIAQ+GTSDWSHMKRSYGAVWETDNVPEGAL
Sbjct: 148 VRVEESSYNPFKLAIKFLYQGGQTEMVAVDIAQVGTSDWSHMKRSYGAVWETDNVPEGAL 207

Query: 61  QLRMVVTSGYDGK 74
           QLRMVVTSGYDGK
Sbjct: 208 QLRMVVTSGYDGK 220

[Close]

BLAST of Bhi05G001395 vs. ExPASy TrEMBL
Match: A0A5D3D657 (Expansin-like A2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold80547G00010 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.4e-33
Identity = 68/73 (93.15%), Postives = 72/73 (98.63%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGAL 60
           +RVEESSYNPFKLAIK+ YQGGQT+MVAVDIAQ+GTSDWSHMKRSYGAVWETDNVPEGAL
Sbjct: 112 VRVEESSYNPFKLAIKFLYQGGQTEMVAVDIAQVGTSDWSHMKRSYGAVWETDNVPEGAL 171

Query: 61  QLRMVVTSGYDGK 74
           QLRMVVTSGYDGK
Sbjct: 172 QLRMVVTSGYDGK 184

[Close]

BLAST of Bhi05G001395 vs. ExPASy TrEMBL
Match: A0A6J1C4W7 (expansin-like A2 OS=Momordica charantia OX=3673 GN=LOC111007952 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-30
Identity = 63/73 (86.30%), Postives = 71/73 (97.26%), Query Frame = 0


Query: 1   MRVEESSYNPFKLAIKYFYQGGQTDMVAVDIAQIGTSDWSHMKRSYGAVWETDNVPEGAL 60
           +RVEESSYNPF LAIK+ YQGGQTD+VAVDIAQ+GTSDWSHMKR+YGAVW+T+N+PEGAL
Sbjct: 147 VRVEESSYNPFYLAIKFLYQGGQTDIVAVDIAQVGTSDWSHMKRNYGAVWDTNNIPEGAL 206

Query: 61  QLRMVVTSGYDGK 74
           QLRMVVTSGYDGK
Sbjct: 207 QLRMVVTSGYDGK 219

The following BLAST results are available for this feature:

BLAST of Bhi05G001395 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38400.1	7.3e-25	69.86	expansin-like A2	[more]
AT3G45960.1	5.2e-23	63.01	expansin-like A3	[more]
AT3G45960.2	5.2e-23	63.01	expansin-like A3	[more]
AT3G45970.1	7.6e-22	62.16	expansin-like A1	[more]
AT4G17030.1	1.0e-10	43.08	expansin-like B1	[more]

BLAST of Bhi05G001395 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVE5	1.0e-23	69.86	Expansin-like A2 OS=Arabidopsis thaliana OX=3702 GN=EXLA2 PE=2 SV=1	[more]
Q9LZT5	7.4e-22	63.01	Expansin-like A3 OS=Arabidopsis thaliana OX=3702 GN=EXLA3 PE=2 SV=1	[more]
Q9LZT4	1.1e-20	62.16	Expansin-like A1 OS=Arabidopsis thaliana OX=3702 GN=EXLA1 PE=2 SV=1	[more]
Q8H274	1.4e-20	61.97	Expansin-like A3 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA3 PE=2 SV=1	[more]
Q7XCL0	6.9e-20	57.53	Expansin-like A2 OS=Oryza sativa subsp. japonica OX=39947 GN=EXLA2 PE=2 SV=1	[more]

BLAST of Bhi05G001395 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZC5	8.7e-34	93.15	expansin-like A2 OS=Cucurbita maxima OX=3661 GN=LOC111468285 PE=3 SV=1	[more]
A0A6J1GKS8	8.7e-34	93.15	expansin-like A2 OS=Cucurbita moschata OX=3662 GN=LOC111455268 PE=3 SV=1	[more]
A0A1S3BHW6	7.4e-33	93.15	Expansin A7-like protein OS=Cucumis melo OX=3656 GN=LOC107990293 PE=2 SV=1	[more]
A0A5D3D657	7.4e-33	93.15	Expansin-like A2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold80547G0...	[more]
A0A6J1C4W7	1.2e-30	86.30	expansin-like A2 OS=Momordica charantia OX=3673 GN=LOC111007952 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007117	Expansin, cellulose-binding-like domain	PFAM	PF01357	Expansin_C	coord: 2..69 e-value: 4.6E-18 score: 65.0
IPR007117	Expansin, cellulose-binding-like domain	PROSITE	PS50843	EXPANSIN_CBD	coord: 11..73 score: 13.161785
IPR036749	Expansin, cellulose-binding-like domain superfamily	GENE3D	2.60.40.760		coord: 1..73 e-value: 4.5E-21 score: 76.6
IPR036749	Expansin, cellulose-binding-like domain superfamily	SUPERFAMILY	49590	PHL pollen allergen	coord: 1..69
None	No IPR available	PANTHER	PTHR31692:SF113	BNACNNG23400D PROTEIN	coord: 1..73
None	No IPR available	PANTHER	PTHR31692	EXPANSIN-B3	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001395	Bhi05M001395	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019953	sexual reproduction
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane