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Bhi05G001238 (gene) Wax gourd (B227) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTAAAAAAATTGAATTTTGTACTTTTGTGAGGAGTGAGCTATTGAGAATAAAAAATAAAAGAGAGAATAGGAAAAAAAAAATCCCCCGTTTTCTCTAGCAGCGGCGGCGGCAGGGTTTAGCATTTCAATGCCCTAAATCTAAGGCGGATCTCCGTCCGTTCATCGCGGCTGATTGCACATAATTTCTCTCCGAACTCTCAGATTTACCGATGGCTTCCTTCGCCGGCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTGCGACTCTTCTGAGCGTCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTCGAATTGCTTCTAAACGACCTTTCTCTCAGTGCTCTGTAAGGTAATTTCCTCACAAGTCTTCGATTTCGACGAAATGTGTTCCATGTGAACTAATTGTGGAAACTGTCTGAGTTGAGTTAAGATGCGTAGAAAAGTATGCCGAGTGTTCTCATAGGTGTTGTTTTATTTTTTCTGTGAAGGATTCCGGTTGAAATGAGCTTCTGTGTGGAGTCCATGCTTCCATTCCATTCTGCGACCTCTTCGGCATTAATGATTTCGATGCTTTCTGTCTCTCGCCATAATTATGGTTGGCTTTCAGAAGGTACTTTCAGTCCTTATTCTTCTAGTAGTTTCTAGAGTGAATCTTACCTTTTTCCAATGTTATTGTTATTCTGCCACTATGAAGATTTCTGATTTCTTTTGTTCAAGAATTTGGTTAGCTGCATTATTGGTCAGTGAATTTTACCTTTTTCAATGTTTCTTGTTATGCTACCACTATGAAGATTTCTGATTTCTTTAGTTCAAGAATTTGGATAGCTGCATTCTTGGCCAGTGAATTTTACCTTTTTTCAATATTCTTGTTATGCTGCCACTATGAAGGTTTCTGATTTTTTTTTGTTCAAGAATTTGGATAGCTCCATTCTTGGCCCTTATCAAAGTAGTTTCTAGAGTGATTTACCTTTTTCAATGTTCTTGTTGTGCTGCCACTATGAAGGTTTCTGATTTCTTTTGTTCAAGAACTTGGATAGCTGCATTCTTGCCCCTATATTTTTGGTTCTACACCAATGGAGGATAACATCTGATATACACAATTAACCATATATTTTTGGCCCTTAGAATATCGGATGAAAAGGGGGAGGATGAAATAGTGAAGAGAAAGCCCTATATATAACATATTCTTTTGACGAGAGGACGACTTTTCATTGATATTTGAAAAGTTATGAGAAACCAAACTCCTATTACGAACCTAGCAAGGAGGGTAAATTATAAGAGAAGAACAAAGATGCTAGGTTTGTAATTCATTCCATCACGATTGAACTTTTCGAACACAAAAATGGATAAAAAGTCTCCAAATAGTCGTCAACTAGTTCATCACAAATGCCCATGTCAACCAATACTAGTGTTTTGGGCTAAATGTATTTCCTACTGCTTTTATAATCTAAATGCTCTTTTGGCTTGATAGAACAAATGTCTAATCCAGCCCCTTTTTTGCTTTTCCGTATCAATGGATTGTGAATTTGAGTTCATCTTAAGATAAAGATTAAATGCTGCATTCTGTACTAGGGTCTAACTTTTAAGCGAAAGAAGTAACAATCACTTCCGTCCTGATGTAACTTGTGATTGAGTTCTTTATAAGTGATGCATTATGTTACAAGTCACAACTATTTATTCCACATAATTGATATAAACGCGAGAACACTAATTGTGATGTTTAATCAGTGTTCAATGATGATGTGTGATGATGAATGGTCAAGCGGCAGAAAGTTTTGTGTGCAGAGTTCTACATTGCCGCAGTGGCCACTGCTAAATTTTGCGAGCTGATCTGCTGGGATTTGGTTATCCATATCTTGACTTTCAGTCGAGTTTGCATGTCTTAGATTCTGACTTTCAGTCTAGTTTGCATGTCTTAGATTCTGAATTTGTGTAACTATTAGACTACTAGATTGTATAGGAAGAGATCCACAGTAGACAGACATTTGAGTTTTATTTGAACAGAAAGAAAGGCTTCAATAAACTGAGTTCATGGAATCTCATTACGTTGAATTCCTTGTAGGATTATCTTTGCAATGAGAGGAAGGATTCTTTCTCCAGTTGTATGAGTACTCTGTCATTACTTTGGCTATGAACATACTTCATAGTTGTGATGAATGCTTGCGTTTTACGACTCCGAAATTTGTTAGGTTGCTGAATGTATGAACTCGAAAAGATTTATTAAATACAAAGCTGTTTGATGAATTATTATATTTTCTGTCTATTAACAGATGTATTAACAGATGTATTACACATTGTTAACGCCATTTAATATCTATGTGGCAGTGACTGGCTTGCAAACTTCATGATATATGATGATTGGAAAAGGTTTTGACCACTTGGGCAACGTACTCACCCATCTAATCTTCGATTGCAACCTGACTTAGCCGATTTTATACTTTGAATTTAGTTTCCTCGGCAAGCATATGGTTGATATTCACCCAAGAAACATAACAGTTTTTTTTTTCCATTCATTTTTTCATATTTTCCAACTTATTATACATAAAAGGACAAAATACTAGGATTGTCTTATGTTTCTTGTGGTTAATGACTGTTGTGAACAATGATATTAAAAAATAAGAATATTATTGCAAAAAAAATCTCTTTTCTTGTGGTTAATCTGTAGTTTTGGTGAAGTTAAAAAAAGAAAAAAGAAAAAAAGAGTTGAAGTGGAATATGAAAGAAAAAGAAGAGATTAGGGTCAAGTTTATCCAATTTTGATTATGTTGTTGTTTACCTATGTTCCATAATCGTAATGAATTATGAGGCTCCATCTAAATTTGTAATCAAAATGTACCATTTGATTGAGTAATGGAAGGTGTGCTTAAAAATTAT GTAAAAAAATTGAATTTTGTACTTTTGTGAGGAGTGAGCTATTGAGAATAAAAAATAAAAGAGAGAATAGGAAAAAAAAAATCCCCCGTTTTCTCTAGCAGCGGCGGCGGCAGGGTTTAGCATTTCAATGCCCTAAATCTAAGGCGGATCTCCGTCCGTTCATCGCGGCTGATTGCACATAATTTCTCTCCGAACTCTCAGATTTACCGATGGCTTCCTTCGCCGGCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTGCGACTCTTCTGAGCGTCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTCGAATTGCTTCTAAACGACCTTTCTCTCAGTGCTCTGTAAGGATTCCGGTTGAAATGAGCTTCTGTGTGGAGTCCATGCTTCCATTCCATTCTGCGACCTCTTCGGCATTAATGATTTCGATGCTTTCTGTCTCTCGCCATAATTATGGTTGGCTTTCAGAAGTGACTGGCTTGCAAACTTCATGATATATGATGATTGGAAAAGGTTTTGACCACTTGGGCAACGTACTCACCCATCTAATCTTCGATTGCAACCTGACTTAGCCGATTTTATACTTTGAATTTAGTTTCCTCGGCAAGCATATGGTTGATATTCACCCAAGAAACATAACAGTTTTTTTTTTCCATTCATTTTTTCATATTTTCCAACTTATTATACATAAAAGGACAAAATACTAGGATTGTCTTATGTTTCTTGTGGTTAATGACTGTTGTGAACAATGATATTAAAAAATAAGAATATTATTGCAAAAAAAATCTCTTTTCTTGTGGTTAATCTGTAGTTTTGGTGAAGTTAAAAAAAGAAAAAAGAAAAAAAGAGTTGAAGTGGAATATGAAAGAAAAAGAAGAGATTAGGGTCAAGTTTATCCAATTTTGATTATGTTGTTGTTTACCTATGTTCCATAATCGTAATGAATTATGAGGCTCCATCTAAATTTGTAATCAAAATGTACCATTTGATTGAGTAATGGAAGGTGTGCTTAAAAATTAT ATGGCTTCCTTCGCCGGCAGGGCCATTTTCCGATCCTCCTCCGGCAAGGCTGCGACTCTTCTGAGCGTCGGAGCCAGAGCAGCTCCGGCTCGTTCACCATTTCGAATTGCTTCTAAACGACCTTTCTCTCAGTGCTCTGTAAGGATTCCGGTTGAAATGAGCTTCTGTGTGGAGTCCATGCTTCCATTCCATTCTGCGACCTCTTCGGCATTAATGATTTCGATGCTTTCTGTCTCTCGCCATAATTATGGTTGGCTTTCAGAAGTGACTGGCTTGCAAACTTCATGA MASFAGRAIFRSSSGKAATLLSVGARAAPARSPFRIASKRPFSQCSVRIPVEMSFCVESMLPFHSATSSALMISMLSVSRHNYGWLSEVTGLQTS Homology
BLAST of Bhi05G001238 vs. TAIR 10
Match: AT2G20585.1 (nuclear fusion defective 6 ) HSP 1 Score: 68.6 bits (166), Expect = 3.2e-12 Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of Bhi05G001238 vs. TAIR 10
Match: AT2G20585.2 (nuclear fusion defective 6 ) HSP 1 Score: 68.6 bits (166), Expect = 3.2e-12 Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of Bhi05G001238 vs. TAIR 10
Match: AT2G20585.3 (nuclear fusion defective 6 ) HSP 1 Score: 68.6 bits (166), Expect = 3.2e-12 Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of Bhi05G001238 vs. TAIR 10
Match: AT1G28395.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11 Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of Bhi05G001238 vs. TAIR 10
Match: AT1G28395.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33847.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11 Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 0
BLAST of Bhi05G001238 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 4.5e-11 Identity = 41/85 (48.24%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of Bhi05G001238 vs. ExPASy TrEMBL
Match: A0A6J1I278 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111468354 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 4.2e-36 Identity = 85/95 (89.47%), Postives = 90/95 (94.74%), Query Frame = 0
BLAST of Bhi05G001238 vs. ExPASy TrEMBL
Match: A0A1S3CB40 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498488 PE=4 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.7e-35 Identity = 84/95 (88.42%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of Bhi05G001238 vs. ExPASy TrEMBL
Match: A0A6J1GM36 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455225 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 3.5e-35 Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of Bhi05G001238 vs. ExPASy TrEMBL
Match: A0A6J1HZK6 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111468354 PE=4 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 9.6e-33 Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 0
BLAST of Bhi05G001238 vs. ExPASy TrEMBL
Match: A0A5A7TDD1 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003170 PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 1.6e-32 Identity = 80/92 (86.96%), Postives = 82/92 (89.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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