Bhi05G001109 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G001109
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	protein RADIALIS-like 3
Location	chr5: 44533800 .. 44536040 (-)
RNA-Seq Expression	Bhi05G001109
Synteny	Bhi05G001109

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATTTCTTCCAACTTGCTTCCAATAATATTACATATATAAATCTCTCTAATTTCTCCATTGCATCTCAAACCAAAAAAAAAAAACCCAAAATCCCCTCTCCAAAAATTGTTCTTCTTCCTCTTGCCAATGGCTTCGAGCTCTTTGAAGCAGCAGCGACCGGAGACGACATGGACGGCAAAGCAAAACAAGCTCTTTGAGAAGGCATTGGCGTTGTACGACAAAGAGACGCCGGAGAGATGGCATAATATCGCCATGGCAGTCGGCGGGAAGTCAACTGACGAAGTTAAACGACACTATGAGGTACTCTTGGAAGATCTCCGGCGAATCGAGTCCGGTCGTGTTCCTATTCCCAATTATAGAGGCGGAGGCAATAGAGATGAAGAGCTGAGGTTAGTGAAGATGATGAAAGATATATAGGAAATAATTTGAACTAATCTTTTTTTATTCAAAATTTATACGTGATTTACTACGAAATATCTTTTTATGAATTCTCTTTAAATTATTTCAACATCGTGGGAGTCTCTTTCAATAATTTTCTACGTCGATCTATTATAATAAAATATTTTTTTAGTCCAACTTGTTAAAATAAGAGATTTGAACTTATCTTTTGTCAAAAATAAATTACTTAATTACTCTATAATAATGTTGGTTGGCATAATATTTAGTTTTAAAATCTTAATCTTAACCATAGTTTTTAAGAAAAGGAATTAAGAATATTTCAAATTATTGTAGCTGATGATATGTTTATATATACATATATATGTATATTTTCTATTTTTGGAGATTTTTTTTTATACCAGGTTTTAGGTGATTATTATGTGCTTTAGTTTTGTGATAAGTTTTAGAATTTTTATGTGGTTGGTGAATATTTGTGAGACTTTGAATATTTTGTTAGTTGAGTGTATAGTAATTTATTGGCTTGTTTGGTGGCTACAATCTAATTAGCTAGTTAATTTTGAGTAGGTAGTAACTATTTAAGTCTAAGATTTAATTAGATAATTAAAGTTTAGGTAAAATTTATTCAAGAATTCAAGTGCAAAATTAACATAATGTCTCTCTTCTTTTTCTATAACTTTTATCCAACAAAATTATACAATTTAACTTGAATAATCTAAAACTAATAATAAAAAAAAACAAAAAATTAAAAGAGCAACAATAATCCTACTTAAAAACAACAAAAAATTACAAAATATATAATCCAACAAAATGCTTAAACTTATGGGGAAAAACCCACCAAAAACATTTAATTTATGATAGGAAAATGTTAGAGCCATCCAACCAAATTAACAATAAAAACAAATGTGTATACAACTTGATGGAATAAATCAATATGCCCAAAAATAATATCACCAACTTCTCCAAGAAAGGTTCAAATCTACTTTCAATTCTAAAATTACAAAAAGGAAAAAAAAAAAAAAAACTTAACAAATAAAGAGTAATAACTATCTTGGATTGTTTTTAAATACAACTAAACCCAAAAGTTAGTGATCATTAAGAATAAATTTAGGGTAATTATTTTACATGACAAAACTATTGAAAATATTTTTGATATAACAAAATGTAACTGTCTATTCATGATAGACAATGAATTTTTTCTATATTTAAAAATATTTTTTAATAATTTTCTATATTTGAAAATAATCCATAAATTTAATTATATCAATAAAATATTAGATAGAAAGCAGACAGATAGAAAATGACATTAATAATGATTTAAAACACAAGACCTTTTGTTCCGACACATGATTTCCAACTTTGATTGGTGTTTTAACTATCACTCTTTTAAGTTCTTTTTCTCCTCACTCCTTTAGTTATAGGGTTCATTTTAATGAAATTACATTTGACTTTGCTTAGTCAAATATCATAATAGAAAAATGAATAATTTTTTTTCAACCTTGAAATTTTCTTGAATAAACTAAAATTGGGGATGAATTATTTTGATTTGATGTGTTCTTCACTTTGCATTTTTGCTTTTTTGGCTAGGCTGCTTAAGTATCTAAAGCTTCAATGAAGAAATTGCCTATGATTGCCACTCCATCTTTCAATCTCTCATCAAACACAAATGGCTAGCTCACTTGGCCTAGGTGGATACATAAATATTTTACTGTAAAATTTTATCTTTAAAATCAACTTTCTCTCAATAAAAAGTGTACAATCAACAATATGTTTGATTATAATTTTATTATTTTTTGCATAGTTGAGATGAAAAGATTCGAACTATAATTCTCTTGAATTCAC

mRNA sequence

CACATTTCTTCCAACTTGCTTCCAATAATATTACATATATAAATCTCTCTAATTTCTCCATTGCATCTCAAACCAAAAAAAAAAAACCCAAAATCCCCTCTCCAAAAATTGTTCTTCTTCCTCTTGCCAATGGCTTCGAGCTCTTTGAAGCAGCAGCGACCGGAGACGACATGGACGGCAAAGCAAAACAAGCTCTTTGAGAAGGCATTGGCGTTGTACGACAAAGAGACGCCGGAGAGATGGCATAATATCGCCATGGCAGTCGGCGGGAAGTCAACTGACGAAGTTAAACGACACTATGAGGTACTCTTGGAAGATCTCCGGCGAATCGAGTCCGGTCGTGTTCCTATTCCCAATTATAGAGGCGGAGGCAATAGAGATGAAGAGCTGAGGCTGCTTAAGTATCTAAAGCTTCAATGAAGAAATTGCCTATGATTGCCACTCCATCTTTCAATCTCTCATCAAACACAAATGGCTAGCTCACTTGGCCTAGGTGGATACATAAATATTTTACTGTAAAATTTTATCTTTAAAATCAACTTTCTCTCAATAAAAAGTGTACAATCAACAATATGTTTGATTATAATTTTATTATTTTTTGCATAGTTGAGATGAAAAGATTCGAACTATAATTCTCTTGAATTCAC

Coding sequence (CDS)

ATGGCTTCGAGCTCTTTGAAGCAGCAGCGACCGGAGACGACATGGACGGCAAAGCAAAACAAGCTCTTTGAGAAGGCATTGGCGTTGTACGACAAAGAGACGCCGGAGAGATGGCATAATATCGCCATGGCAGTCGGCGGGAAGTCAACTGACGAAGTTAAACGACACTATGAGGTACTCTTGGAAGATCTCCGGCGAATCGAGTCCGGTCGTGTTCCTATTCCCAATTATAGAGGCGGAGGCAATAGAGATGAAGAGCTGAGGCTGCTTAAGTATCTAAAGCTTCAATGA

Protein sequence

MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVLLEDLRRIESGRVPIPNYRGGGNRDEELRLLKYLKLQ

Homology

[Close]

BLAST of Bhi05G001109 vs. TAIR 10
Match: AT1G75250.2 (RAD-like 6 )

HSP 1 Score: 110.9 bits (276), Expect = 5.6e-25
Identity = 54/100 (54.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 1  MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
          MAS+S     P   WT  QNK+FE+ALA+YDK+TP+RWHN+A AVGGK+ +EVKRHY++L
Sbjct: 1  MASNSRSSISP---WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDIL 60

Query: 61 LEDLRRIESGRVPIPNYR-----GGGNRDEELRLLKYLKL 96
          +EDL  IE+GRVP+PNY+          D + R +K LK+
Sbjct: 61 VEDLINIETGRVPLPNYKTFESNSRSINDFDTRKMKNLKI 97

[Close]

BLAST of Bhi05G001109 vs. TAIR 10
Match: AT4G39250.1 (RAD-like 1 )

HSP 1 Score: 110.9 bits (276), Expect = 5.6e-25
Identity = 55/101 (54.46%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 1   MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
           MASSS+  Q    +WTAKQNK FE+ALA YD++TP RW N+A  VGGK+T+EVKRHYE+L
Sbjct: 1   MASSSMSSQ-SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELL 60

Query: 61  LEDLRRIESGRVPIPNYR--GG---GNRDEELRLLKYLKLQ 97
           ++D+  IE+G VP PNYR  GG   G   +E + ++ ++LQ
Sbjct: 61  VQDINSIENGHVPFPNYRTSGGCTNGRLSQEEKRMRNMRLQ 100

[Close]

BLAST of Bhi05G001109 vs. TAIR 10
Match: AT1G75250.1 (RAD-like 6 )

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24
Identity = 49/78 (62.82%), Postives = 64/78 (82.05%), Query Frame = 0


Query: 1  MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
          MAS+S     P   WT  QNK+FE+ALA+YDK+TP+RWHN+A AVGGK+ +EVKRHY++L
Sbjct: 1  MASNSRSSISP---WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDIL 60

Query: 61 LEDLRRIESGRVPIPNYR 79
          +EDL  IE+GRVP+PNY+
Sbjct: 61 VEDLINIETGRVPLPNYK 75

[Close]

BLAST of Bhi05G001109 vs. TAIR 10
Match: AT1G19510.1 (RAD-like 5 )

HSP 1 Score: 109.4 bits (272), Expect = 1.6e-24
Identity = 53/103 (51.46%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 1   MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
           MASSS+      ++WT+KQNK+FE+ALA+YDK+TP+RW N+A AVG KS +EVKRHY++L
Sbjct: 1   MASSSMSS---SSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDIL 60

Query: 61  LEDLRRIESGRVPIPNY-------RGGGNRDEELRLLKYLKLQ 97
           +EDL  IE   VP+P Y       +  G  D +LRL+K +++Q
Sbjct: 61  VEDLMNIEQDLVPLPKYKTVDVGSKSRGIDDFDLRLMKNMRIQ 100

[Close]

BLAST of Bhi05G001109 vs. TAIR 10
Match: AT2G21650.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 3.4e-22
Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = 0


Query: 1   MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
           MAS S+       +WT KQNK FE+ALA+YD++TP+RWHN+A AVGGK+ +E KR Y++L
Sbjct: 1   MASGSMSSY-GSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLL 60

Query: 61  LEDLRRIESGRVPIPNYR---GGGN----RDEELRLLKYLKLQ 97
           + D+  IE+G VP P+Y+   G  N    RDEE R ++ +KLQ
Sbjct: 61  VRDIESIENGHVPFPDYKTTTGNSNRGRLRDEEKR-MRSMKLQ 101

[Close]

BLAST of Bhi05G001109 vs. ExPASy Swiss-Prot
Match: Q6NNN0 (Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 6.1e-24
Identity = 50/82 (60.98%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 1  MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
          MAS+S+       +WT K+NKLFE+ALA YD++TP+RWHN+A AVGGKS +EV+RHYE+L
Sbjct: 1  MASNSMSS---SASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELL 60

Query: 61 LEDLRRIESGRVPIPNYRGGGN 83
          + D+  IESGR P PNYR  GN
Sbjct: 61 IRDVNDIESGRYPHPNYRSNGN 79

[Close]

BLAST of Bhi05G001109 vs. ExPASy Swiss-Prot
Match: F4JVB8 (Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.9e-24
Identity = 55/101 (54.46%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 1   MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
           MASSS+  Q    +WTAKQNK FE+ALA YD++TP RW N+A  VGGK+T+EVKRHYE+L
Sbjct: 1   MASSSMSSQ-SSGSWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELL 60

Query: 61  LEDLRRIESGRVPIPNYR--GG---GNRDEELRLLKYLKLQ 97
           ++D+  IE+G VP PNYR  GG   G   +E + ++ ++LQ
Sbjct: 61  VQDINSIENGHVPFPNYRTSGGCTNGRLSQEEKRMRNMRLQ 100

[Close]

BLAST of Bhi05G001109 vs. ExPASy Swiss-Prot
Match: Q1A173 (Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 7.9e-24
Identity = 54/100 (54.00%), Postives = 72/100 (72.00%), Query Frame = 0


Query: 1  MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
          MAS+S     P   WT  QNK+FE+ALA+YDK+TP+RWHN+A AVGGK+ +EVKRHY++L
Sbjct: 1  MASNSRSSISP---WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDIL 60

Query: 61 LEDLRRIESGRVPIPNYR-----GGGNRDEELRLLKYLKL 96
          +EDL  IE+GRVP+PNY+          D + R +K LK+
Sbjct: 61 VEDLINIETGRVPLPNYKTFESNSRSINDFDTRKMKNLKI 97

[Close]

BLAST of Bhi05G001109 vs. ExPASy Swiss-Prot
Match: Q8GW75 (Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-23
Identity = 53/103 (51.46%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 1   MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
           MASSS+      ++WT+KQNK+FE+ALA+YDK+TP+RW N+A AVG KS +EVKRHY++L
Sbjct: 1   MASSSMSS---SSSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDIL 60

Query: 61  LEDLRRIESGRVPIPNY-------RGGGNRDEELRLLKYLKLQ 97
           +EDL  IE   VP+P Y       +  G  D +LRL+K +++Q
Sbjct: 61  VEDLMNIEQDLVPLPKYKTVDVGSKSRGIDDFDLRLMKNMRIQ 100

[Close]

BLAST of Bhi05G001109 vs. ExPASy Swiss-Prot
Match: Q58FS3 (Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.0e-22
Identity = 46/83 (55.42%), Postives = 67/83 (80.72%), Query Frame = 0


Query: 15 WTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVLLEDLRRIESGRVPI 74
          W+AK+NK FE+ALA+YDK+TP+RW N+A AV G++ +EVK+HYE+L+ED++ IESG+VP 
Sbjct: 11 WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPF 70

Query: 75 PNYR-GGGNRDEELRLLKYLKLQ 97
          PNYR  GGN   + +  + LK++
Sbjct: 71 PNYRTTGGNMKTDEKRFRNLKIR 93

[Close]

BLAST of Bhi05G001109 vs. ExPASy TrEMBL
Match: A0A6J1ICR6 (protein RADIALIS-like 3 OS=Cucurbita maxima OX=3661 GN=LOC111474479 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.0e-42
Identity = 88/96 (91.67%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1  MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
          MASSSLKQQRPE TWTAKQNKLFEKALALYDKE PERWHNIAMAVGGKS DEVKRHYE+L
Sbjct: 1  MASSSLKQQRPEATWTAKQNKLFEKALALYDKEMPERWHNIAMAVGGKSADEVKRHYEIL 60

Query: 61 LEDLRRIESGRVPIPNYRGGGNRDEELRLLKYLKLQ 97
          LEDL+RIESGRVPIPNYRG  N DEELRLLKYLKLQ
Sbjct: 61 LEDLQRIESGRVPIPNYRGAHNGDEELRLLKYLKLQ 96

[Close]

BLAST of Bhi05G001109 vs. ExPASy TrEMBL
Match: A0A6J1GKW1 (protein RADIALIS-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111455298 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.0e-42
Identity = 89/96 (92.71%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1  MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
          MASSSLKQQRPE TWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKS DEVKRHYE+L
Sbjct: 1  MASSSLKQQRPEATWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSADEVKRHYEIL 60

Query: 61 LEDLRRIESGRVPIPNYRGGGNRDEELRLLKYLKLQ 97
          LEDL RIESGRVPIPNYRG  N DEELRLLKYLKLQ
Sbjct: 61 LEDLLRIESGRVPIPNYRGVHNGDEELRLLKYLKLQ 96

[Close]

BLAST of Bhi05G001109 vs. ExPASy TrEMBL
Match: A0A1S3BHB0 (protein RADIALIS-like 3 OS=Cucumis melo OX=3656 GN=LOC103489572 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.6e-41
Identity = 86/96 (89.58%), Postives = 90/96 (93.75%), Query Frame = 0


Query: 1  MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
          MASSSLKQQRPETTWT KQNKLFEKALALYDK+TPERW NIA AVGGKS DEV+RHYE+L
Sbjct: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60

Query: 61 LEDLRRIESGRVPIPNYRGGGNRDEELRLLKYLKLQ 97
          LEDLR+IESGRVPIPNYRG  NRDEELRLLKYLKLQ
Sbjct: 61 LEDLRQIESGRVPIPNYRGTSNRDEELRLLKYLKLQ 96

[Close]

BLAST of Bhi05G001109 vs. ExPASy TrEMBL
Match: A0A0A0K2A2 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G000020 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.4e-41
Identity = 86/96 (89.58%), Postives = 89/96 (92.71%), Query Frame = 0


Query: 1  MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
          MASSSLKQQRPETTWT KQNKLFEKALALYDK+TPERW NIA AVGGKS DEV+RHYE+L
Sbjct: 1  MASSSLKQQRPETTWTPKQNKLFEKALALYDKDTPERWQNIATAVGGKSADEVQRHYEIL 60

Query: 61 LEDLRRIESGRVPIPNYRGGGNRDEELRLLKYLKLQ 97
          LEDLRRIESGRVPIPNYR   NRDEELRLLKYLKLQ
Sbjct: 61 LEDLRRIESGRVPIPNYRRTSNRDEELRLLKYLKLQ 96

[Close]

BLAST of Bhi05G001109 vs. ExPASy TrEMBL
Match: A0A6J1C2H2 (protein RADIALIS-like 3 OS=Momordica charantia OX=3673 GN=LOC111007854 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.8e-39
Identity = 86/100 (86.00%), Postives = 89/100 (89.00%), Query Frame = 0


Query: 1   MASSSLKQQRPETTWTAKQNKLFEKALALYDKETPERWHNIAMAVGGKSTDEVKRHYEVL 60
           MASSSLKQQRPE TWTAKQNKLFEKALALYDKETPERW NIA AVGGKS DEVKRHY++L
Sbjct: 1   MASSSLKQQRPEATWTAKQNKLFEKALALYDKETPERWQNIANAVGGKSADEVKRHYQIL 60

Query: 61  LEDLRRIESGRVPIPNYR----GGGNRDEELRLLKYLKLQ 97
           LEDLRRIESGRVPIPNYR      GN DEELRLLKYLKL+
Sbjct: 61  LEDLRRIESGRVPIPNYRASAXAAGNADEELRLLKYLKLR 100

The following BLAST results are available for this feature:

BLAST of Bhi05G001109 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G75250.2	5.6e-25	54.00	RAD-like 6	[more]
AT4G39250.1	5.6e-25	54.46	RAD-like 1	[more]
AT1G75250.1	1.3e-24	62.82	RAD-like 6	[more]
AT1G19510.1	1.6e-24	51.46	RAD-like 5	[more]
AT2G21650.1	3.4e-22	50.49	Homeodomain-like superfamily protein	[more]

BLAST of Bhi05G001109 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6NNN0	6.1e-24	60.98	Protein RADIALIS-like 3 OS=Arabidopsis thaliana OX=3702 GN=RL3 PE=2 SV=1	[more]
F4JVB8	7.9e-24	54.46	Protein RADIALIS-like 1 OS=Arabidopsis thaliana OX=3702 GN=RL1 PE=2 SV=1	[more]
Q1A173	7.9e-24	54.00	Protein RADIALIS-like 6 OS=Arabidopsis thaliana OX=3702 GN=RL6 PE=2 SV=1	[more]
Q8GW75	2.3e-23	51.46	Protein RADIALIS-like 5 OS=Arabidopsis thaliana OX=3702 GN=RL5 PE=3 SV=1	[more]
Q58FS3	2.0e-22	55.42	Transcription factor RADIALIS OS=Antirrhinum majus OX=4151 GN=RAD PE=1 SV=1	[more]

BLAST of Bhi05G001109 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ICR6	3.0e-42	91.67	protein RADIALIS-like 3 OS=Cucurbita maxima OX=3661 GN=LOC111474479 PE=4 SV=1	[more]
A0A6J1GKW1	3.0e-42	92.71	protein RADIALIS-like 3 OS=Cucurbita moschata OX=3662 GN=LOC111455298 PE=4 SV=1	[more]
A0A1S3BHB0	2.6e-41	89.58	protein RADIALIS-like 3 OS=Cucumis melo OX=3656 GN=LOC103489572 PE=4 SV=1	[more]
A0A0A0K2A2	7.4e-41	89.58	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G000020 PE=4 S...	[more]
A0A6J1C2H2	1.8e-39	86.00	protein RADIALIS-like 3 OS=Momordica charantia OX=3673 GN=LOC111007854 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 11..63 e-value: 2.3E-7 score: 40.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 7..61 score: 6.365003
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 14..61 e-value: 1.05571E-5 score: 37.1698
None	No IPR available	GENE3D	1.10.10.60		coord: 7..74 e-value: 3.5E-22 score: 79.9
None	No IPR available	PANTHER	PTHR43952:SF29	PROTEIN RADIALIS-LIKE 3	coord: 1..78
IPR044636	Transcription factor RADIALIS-like	PANTHER	PTHR43952	MYB FAMILY TRANSCRIPTION FACTOR-RELATED	coord: 1..78
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 13..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M001109	Bhi05M001109	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003723	RNA binding