Bhi05G000878 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G000878
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	cysteine-rich and transmembrane domain-containing protein WIH2-like
Location	chr5: 36433594 .. 36433995 (+)
RNA-Seq Expression	Bhi05G000878
Synteny	Bhi05G000878

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCTGCCGCAGGGTAACCTCTAAAAACCATTACTCTTTAATTCCTCTCTTACTTCTGCTACACTTTCTCGAAATTCTTATATCCAAATCGAATGTATCTTACTTTTTCTTTCCGAGAAATTGATGTATCTCTCTTATTCTTTGTTTTCATCTCGCTTTCGCGCTTTGATTTGACTGATTTTTGGCTGTGATTCGTTGAATTTTGACGATTTCAGGTTATCCGCCGCAAGGATATCCTCCGAAGGACGCTTATCCACCGCAGGGCGGTTATGCTCCGGCGGGATATCCACCTCCCCCGGTGTACGGTCATCCTCCGCCGCAACATCAAAACCAAAAGGAAGAGGATGGATTCTTCAAACGCTG

mRNA sequence

ATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCTGCCGCAGGGTTATCCGCCGCAAGGATATCCTCCGAAGGACGCTTATCCACCGCAGGGCGGTTATGCTCCGGCGGGATATCCACCTCCCCCGGTGTACGGTCATCCTCCGCCGCAACATCAAAACCAAAAGGAAGAGGATGGATTCTTCAAACGCTG

Coding sequence (CDS)

ATGAGTTACTACAACCAGCCACCGCCTCCCGTCGGCGTTCCTCTGCCGCAGGGTTATCCGCCGCAAGGATATCCTCCGAAGGACGCTTATCCACCGCAGGGCGGTTATGCTCCGGCGGGATATCCACCTCCCCCGGTGTACGGTCATCCTCCGCCGCAACATCAAAACCAAAAGGAAGAGGATGGATTCTTCAAACGCTG

Protein sequence

MSYYNQPPPPVGVPLPQGYPPQGYPPKDAYPPQGGYAPAGYPPPPVYGHPPPQHQNQKEEDGFFKR

Homology

[Close]

BLAST of Bhi05G000878 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 68.2 bits (165), Expect = 2.9e-12
Identity = 46/85 (54.12%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 1  MSYYNQPPPPVGVPLPQGYPPQGYPPKDAYPPQG---------GYAPAGYPP-------- 60
          MS YNQ  PPVGVP PQGYPP+GY PKDAYPPQG         GY P GYP         
Sbjct: 1  MSQYNQ--PPVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGY 60

Query: 61 PPVYG---HPPPQHQNQKEEDGFFK 66
          PP Y     PPPQHQ Q+   GF +
Sbjct: 61 PPPYAPQYPPPPQHQQQQSSPGFLE 82

[Close]

BLAST of Bhi05G000878 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 5.6e-08
Identity = 32/59 (54.24%), Postives = 35/59 (59.32%), Query Frame = 0


Query: 8  PPPVGVPLPQGYPPQGYPPKDAYP----PQGGYAPAGYPPP--------PVYGHPPPQH 55
          PPP G P  +GYPP GYPP   YP    PQ GY PAGYPPP        P  G+PPPQ+
Sbjct: 13 PPPQGYPPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYPAQGYPPPQY 71

[Close]

BLAST of Bhi05G000878 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 53.1 bits (126), Expect = 9.6e-08
Identity = 36/71 (50.70%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 4  YNQPPPPVGVPLPQGYPPQGYPPKDAYPPQGGYAPAGYPPP------PVYGHPPPQHQ-- 63
          Y+Q   PVG P     PPQGYPPKD YPP  GY PAGYPPP      P  G+PPPQ+   
Sbjct: 2  YHQEQHPVGAP-----PPQGYPPKDGYPP-AGYPPAGYPPPGYAQGYPAQGYPPPQYSQA 61

Query: 64 -NQKEEDGFFK 66
            QK+  G  +
Sbjct: 62 PQQKQNAGMLE 66

[Close]

BLAST of Bhi05G000878 vs. TAIR 10
Match: AT4G19200.1 (proline-rich family protein )

HSP 1 Score: 46.6 bits (109), Expect = 9.0e-06
Identity = 27/49 (55.10%), Postives = 28/49 (57.14%), Query Frame = 0


Query: 14 PLPQGYPPQGYPPKDAYPPQGGYAPAGYPP----------PPVYGHPPP 53
          P   GYPPQGYPP+  YPP GGY PAGYPP          PP  G  PP
Sbjct: 27 PAQGGYPPQGYPPQQGYPPAGGYPPAGYPPGAYPAAPGGYPPAPGGYPP 75

[Close]

BLAST of Bhi05G000878 vs. TAIR 10
Match: AT5G17650.1 (glycine/proline-rich protein )

HSP 1 Score: 43.1 bits (100), Expect = 9.9e-05
Identity = 30/60 (50.00%), Postives = 32/60 (53.33%), Query Frame = 0


Query: 2  SYYNQPPPPVGVPLPQGYPPQGYPPKDAYPPQGGYAPAGYPPP-------PVYGHPPPQH 55
          S Y  PPPP     P GYPP  YPP   YPP  GY PAGYPP        P +G+P P H
Sbjct: 41 SSYPYPPPPP----PHGYPPVAYPPHGGYPP-AGYPPAGYPPAGYPAHGYPSHGYPRPSH 95

[Close]

BLAST of Bhi05G000878 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 4.1e-11
Identity = 46/85 (54.12%), Postives = 49/85 (57.65%), Query Frame = 0


Query: 1  MSYYNQPPPPVGVPLPQGYPPQGYPPKDAYPPQG---------GYAPAGYPP-------- 60
          MS YNQ  PPVGVP PQGYPP+GY PKDAYPPQG         GY P GYP         
Sbjct: 1  MSQYNQ--PPVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGY 60

Query: 61 PPVYG---HPPPQHQNQKEEDGFFK 66
          PP Y     PPPQHQ Q+   GF +
Sbjct: 61 PPPYAPQYPPPPQHQQQQSSPGFLE 82

[Close]

BLAST of Bhi05G000878 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.4e-06
Identity = 36/71 (50.70%), Postives = 41/71 (57.75%), Query Frame = 0


Query: 4  YNQPPPPVGVPLPQGYPPQGYPPKDAYPPQGGYAPAGYPPP------PVYGHPPPQHQ-- 63
          Y+Q   PVG P     PPQGYPPKD YPP  GY PAGYPPP      P  G+PPPQ+   
Sbjct: 2  YHQEQHPVGAP-----PPQGYPPKDGYPP-AGYPPAGYPPPGYAQGYPAQGYPPPQYSQA 61

Query: 64 -NQKEEDGFFK 66
            QK+  G  +
Sbjct: 62 PQQKQNAGMLE 66

[Close]

BLAST of Bhi05G000878 vs. ExPASy Swiss-Prot
Match: P09241 (Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 1.8e-06
Identity = 31/48 (64.58%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 6   QPPPPVGVPLPQGYPPQGYPPKDAYPPQGGYAPAGYPPP--PVYGHPP 52
           QPPPP     PQGYPPQGYPP+ AYPP  GY P GYPP   P  G+PP
Sbjct: 388 QPPPP-----PQGYPPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPP 430

[Close]

BLAST of Bhi05G000878 vs. ExPASy Swiss-Prot
Match: P24639 (Annexin A7 OS=Dictyostelium discoideum OX=44689 GN=nxnA PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 9.7e-05
Identity = 31/52 (59.62%), Postives = 33/52 (63.46%), Query Frame = 0


Query: 8  PPPVGVPLPQGYPP-QGYPPKDAYPPQGGYAP-AGYPP----PPVYGHPPPQ 54
          PP  G P  QGYPP QGYPP+  YPPQ GY P  GYPP    PP  G+PP Q
Sbjct: 47 PPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQGYPPQQ 98

[Close]

BLAST of Bhi05G000878 vs. ExPASy Swiss-Prot
Match: P31356 (Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 1.3e-04
Identity = 30/44 (68.18%), Postives = 31/44 (70.45%), Query Frame = 0


Query: 8   PPPVGVPLPQGYPPQGYPPKDAYPPQGGYAPAGYPPPPVYGHPP 52
           PP    P PQGYPPQGYPP+  YPPQ GY P GYPPPP  G PP
Sbjct: 389 PPQGYAPPPQGYPPQGYPPQ-GYPPQ-GYPPQGYPPPP-QGAPP 429

[Close]

BLAST of Bhi05G000878 vs. ExPASy TrEMBL
Match: A0A6J1I9Y5 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111470998 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.5e-19
Identity = 55/72 (76.39%), Postives = 56/72 (77.78%), Query Frame = 0


Query: 1  MSYYNQPPPPVGVPLPQGYPPQGYPPKDA-----YPPQGGYAPAGYP----PPPVYGHPP 60
          MSYYNQPPPPVGVP PQGYPPQGYPPKDA     YPPQGGY PAGYP    PPP YG P 
Sbjct: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPPPAYGPPQ 60

Query: 61 PQHQNQKEEDGF 64
          PQH NQK+E GF
Sbjct: 61 PQHPNQKKEVGF 72

[Close]

BLAST of Bhi05G000878 vs. ExPASy TrEMBL
Match: A0A0A0K2W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070830 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.4e-19
Identity = 55/77 (71.43%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 2  SYYNQPPPPVGVPLPQGYPPQGYPPKDAYPPQG----------GYAPAGYPPPPVYG--- 61
          SYY QPPPPVGVP PQGYPPQGYPPKDAYPPQG          GY P GYPPPP YG   
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGPAY 62

Query: 62 --HPPPQHQNQKEEDGF 64
            HPPPQHQNQK+E GF
Sbjct: 63 GHHPPPQHQNQKKEVGF 79

[Close]

BLAST of Bhi05G000878 vs. ExPASy TrEMBL
Match: A0A6J1GJV9 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111454944 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18
Identity = 54/76 (71.05%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 1  MSYYNQPPPPVGVPLPQGYPPQGYPPKDAYPPQG----------GYAPAGYPPP---PVY 60
          MSYYNQPPPPVGVP PQGYPPQGYPPKDAYPPQG          GY P GYPPP   P Y
Sbjct: 1  MSYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPAYGPAY 60

Query: 61 GHPPPQHQNQKEEDGF 64
          G P PQH NQK+E GF
Sbjct: 61 GPPQPQHSNQKKEVGF 76

[Close]

BLAST of Bhi05G000878 vs. ExPASy TrEMBL
Match: A0A5A7SME1 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001290 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.7e-16
Identity = 53/78 (67.95%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 2  SYYNQPPPPVGVPLPQGYPPQGYPPKDAYPPQG----------GYAPAGYPPPPVY---- 61
          SYY QPPPPVGVP PQGYPPQGYPPKDAYPPQG          GY P GYPP P Y    
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62

Query: 62 -GHPPPQHQ-NQKEEDGF 64
           GHPPPQ+Q NQK+E GF
Sbjct: 63 GGHPPPQYQNNQKKEVGF 80

[Close]

BLAST of Bhi05G000878 vs. ExPASy TrEMBL
Match: A0A1S3BZZ2 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103495315 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 9.7e-16
Identity = 53/78 (67.95%), Postives = 55/78 (70.51%), Query Frame = 0


Query: 2  SYYNQPPPPVGVPLPQGYPPQGYPPKDAYPPQG----------GYAPAGYPPPPVY---- 61
          SYY QPPPPVGVP PQGYPPQGYPPKDAYPPQG          GY P GYPP P Y    
Sbjct: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62

Query: 62 -GHPPPQHQ-NQKEEDGF 64
           GHPPPQ+Q NQK+E GF
Sbjct: 63 GGHPPPQYQNNQKKEVGF 80

The following BLAST results are available for this feature:

BLAST of Bhi05G000878 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41420.1	2.9e-12	54.12	proline-rich family protein	[more]
AT3G49845.1	5.6e-08	54.24	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G67600.1	9.6e-08	50.70	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT4G19200.1	9.0e-06	55.10	proline-rich family protein	[more]
AT5G17650.1	9.9e-05	50.00	glycine/proline-rich protein	[more]

BLAST of Bhi05G000878 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	4.1e-11	54.12	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q9FJW3	1.4e-06	50.70	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
P09241	1.8e-06	64.58	Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1	[more]
P24639	9.7e-05	59.62	Annexin A7 OS=Dictyostelium discoideum OX=44689 GN=nxnA PE=1 SV=1	[more]
P31356	1.3e-04	68.18	Rhodopsin OS=Todarodes pacificus OX=6637 GN=RHO PE=1 SV=2	[more]

BLAST of Bhi05G000878 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I9Y5	5.5e-19	76.39	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]
A0A0A0K2W8	9.4e-19	71.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070830 PE=4 SV=1	[more]
A0A6J1GJV9	4.7e-18	71.05	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]
A0A5A7SME1	9.7e-16	67.95	Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A1S3BZZ2	9.7e-16	67.95	cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006031	XYPPX repeat	PFAM	PF02162	XYPPX	coord: 16..26 e-value: 8.6E-4 score: 19.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000878	Bhi05M000878	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane