Bhi05G000857 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G000857
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Pectin lyase-like superfamily protein
Location	chr5: 35807214 .. 35807696 (+)
RNA-Seq Expression	Bhi05G000857
Synteny	Bhi05G000857

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACATATTGCATATTAAATGAGCAGAGTTTAAGGTTCAACTTCATTACCAATTCAATTGTGAAGAGAATAACATCACTTGATAGCAAGAAATTTGATATCAACATCCTAGGATGCAACAACCTTACATTCCATGGTGTCAACATAATTGCACCAGAAAATAGTCCCAACACGGATGGAATTTACATTGGTCGATCGATTGGAATCTCAATCACAAAGTCTCGAACCGCAACAGGAGATGATTGCATCTCCCTTGGAGATGGAAGCAAACGAGTAAAAGTCACCAACGTTACATGCGGGCCTGGACATGGAATAAGCATAGGAAGTCTTGGAAAATACACTAATGAAGAAGCCATTGAAGGTGTCGTAGTGAATAACTGCACCATAATGAACACCACTAATGGTGTTAGGATCAAAACATGGTCAGCCTCTCCTGTTGCCGGCACTGCCACAACATGCATTTTTCAGACATTAAAATGGTGA

mRNA sequence

ATGACATATTGCATATTAAATGAGCAGAGTTTAAGGTTCAACTTCATTACCAATTCAATTGTGAAGAGAATAACATCACTTGATAGCAAGAAATTTGATATCAACATCCTAGGATGCAACAACCTTACATTCCATGGTGTCAACATAATTGCACCAGAAAATAGTCCCAACACGGATGGAATTTACATTGGTCGATCGATTGGAATCTCAATCACAAAGTCTCGAACCGCAACAGGAGATGATTGCATCTCCCTTGGAGATGGAAGCAAACGAGTAAAAGTCACCAACGTTACATGCGGGCCTGGACATGGAATAAGCATAGGAAGTCTTGGAAAATACACTAATGAAGAAGCCATTGAAGGTGTCGTAGTGAATAACTGCACCATAATGAACACCACTAATGGTGTTAGGATCAAAACATGGTCAGCCTCTCCTGTTGCCGGCACTGCCACAACATGCATTTTTCAGACATTAAAATGGTGA

Coding sequence (CDS)

ATGACATATTGCATATTAAATGAGCAGAGTTTAAGGTTCAACTTCATTACCAATTCAATTGTGAAGAGAATAACATCACTTGATAGCAAGAAATTTGATATCAACATCCTAGGATGCAACAACCTTACATTCCATGGTGTCAACATAATTGCACCAGAAAATAGTCCCAACACGGATGGAATTTACATTGGTCGATCGATTGGAATCTCAATCACAAAGTCTCGAACCGCAACAGGAGATGATTGCATCTCCCTTGGAGATGGAAGCAAACGAGTAAAAGTCACCAACGTTACATGCGGGCCTGGACATGGAATAAGCATAGGAAGTCTTGGAAAATACACTAATGAAGAAGCCATTGAAGGTGTCGTAGTGAATAACTGCACCATAATGAACACCACTAATGGTGTTAGGATCAAAACATGGTCAGCCTCTCCTGTTGCCGGCACTGCCACAACATGCATTTTTCAGACATTAAAATGGTGA

Protein sequence

MTYCILNEQSLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGISITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTIMNTTNGVRIKTWSASPVAGTATTCIFQTLKW

Homology

[Close]

BLAST of Bhi05G000857 vs. TAIR 10
Match: AT3G07840.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 176.8 bits (447), Expect = 1.4e-44
Identity = 80/149 (53.69%), Postives = 111/149 (74.50%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           S+RF+F+ N+ ++ I+S+D+K F IN+LG  N+TF  V +IAP  SPNTDGI++GRS G+
Sbjct: 141 SIRFDFVENAEIRDISSIDAKNFHINVLGAKNMTFDNVKVIAPAESPNTDGIHLGRSEGV 200

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
            I  S+ ATGDDCIS+GDG K + V NV CGPGHGIS+GSLG+Y +E+ + G+ V NCT+
Sbjct: 201 KILNSKIATGDDCISVGDGMKNLHVENVMCGPGHGISVGSLGRYVHEQDVTGITVVNCTL 260

Query: 130 MNTTNGVRIKTWSASPVAGTATTCIFQTL 159
             T NG+RIKTW ++  A TA+   F+ +
Sbjct: 261 QGTDNGLRIKTWPSAACATTASGIHFENI 289

[Close]

BLAST of Bhi05G000857 vs. TAIR 10
Match: AT3G07830.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.8e-44
Identity = 78/149 (52.35%), Postives = 113/149 (75.84%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           S+RF+F+TN+ ++ I+S+D+K F IN++G  N+TF  V I+AP  SPNTDGI++GRS+G+
Sbjct: 141 SIRFDFVTNAEIRDISSIDAKNFHINVIGAKNMTFDNVKIMAPAESPNTDGIHLGRSVGV 200

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
           SI  SR +TGDDC+S+GDG   + V NV CGPGHGIS+GSLG+Y +E+ + G+ V NCT+
Sbjct: 201 SIINSRISTGDDCVSVGDGMVNLLVKNVVCGPGHGISVGSLGRYGHEQDVSGIRVINCTL 260

Query: 130 MNTTNGVRIKTWSASPVAGTATTCIFQTL 159
             T NG+RIKTW ++  + TA+   F+ +
Sbjct: 261 QETDNGLRIKTWPSAACSTTASNIHFENI 289

[Close]

BLAST of Bhi05G000857 vs. TAIR 10
Match: AT5G48140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 175.3 bits (443), Expect = 4.1e-44
Identity = 81/149 (54.36%), Postives = 111/149 (74.50%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           S+RF+F+T++ ++ ITSLD+K F IN++G  N+TF  V IIAP  SPNTDGI++GRS GI
Sbjct: 140 SIRFDFVTDAKIRGITSLDAKHFHINVIGAKNVTFEDVKIIAPAESPNTDGIHVGRSDGI 199

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
            I  S  +TGDDC+S+GDG K + V  VTCGPGHGISIGSLG+Y++EE + G+ + NCT+
Sbjct: 200 KIINSFISTGDDCVSVGDGMKNLLVERVTCGPGHGISIGSLGRYSHEENVSGIKIINCTL 259

Query: 130 MNTTNGVRIKTWSASPVAGTATTCIFQTL 159
             T NG+RIKTW ++    TA+   F+ +
Sbjct: 260 QETDNGLRIKTWPSAACTTTASDIHFENI 288

[Close]

BLAST of Bhi05G000857 vs. TAIR 10
Match: AT3G07820.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-43
Identity = 79/149 (53.02%), Postives = 112/149 (75.17%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           S+RF+FI NS ++ I+S+D+K F IN+LG  N+T + + I+APE+SPNTDGI++GRS G+
Sbjct: 140 SIRFDFILNSEIRDISSIDAKNFHINVLGAKNMTMNNIKIVAPEDSPNTDGIHLGRSDGV 199

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
            I  S  +TGDDCIS+GDG K + V  VTCGPGHGIS+GSLG+Y +E+ + G+ V NCT+
Sbjct: 200 KILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSLGRYGHEQDVSGIKVINCTL 259

Query: 130 MNTTNGVRIKTWSASPVAGTATTCIFQTL 159
             T NG+RIKTW ++  + TA+   F+ +
Sbjct: 260 QETDNGLRIKTWPSAACSTTASDIHFEDI 288

[Close]

BLAST of Bhi05G000857 vs. TAIR 10
Match: AT3G07850.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 164.1 bits (414), Expect = 9.4e-41
Identity = 79/149 (53.02%), Postives = 106/149 (71.14%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           ++RF  +TNS +  ITS +SK F +NIL C N+T   + I AP  S NTDGI+IGRS G+
Sbjct: 191 NIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGV 250

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
           ++  ++  TGDDC+S+GDG++ + V NV CGPGHGISIGSLG+Y NE+ ++GV V  C I
Sbjct: 251 NLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLI 310

Query: 130 MNTTNGVRIKTWSASPVAGTATTCIFQTL 159
            NT NGVRIKTW  SP  G A+  +F+ +
Sbjct: 311 KNTDNGVRIKTWPGSP-PGIASNILFEDI 338

[Close]

BLAST of Bhi05G000857 vs. ExPASy Swiss-Prot
Match: P24548 (Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 8.8e-44
Identity = 86/155 (55.48%), Postives = 110/155 (70.97%), Query Frame = 0


Query: 4   CILNEQSLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYI 63
           C     +LR   +TNSI++ +T+LDSK F +N++GC NLTF    I A E S NTDGI+I
Sbjct: 103 CKTLSMNLRLYAVTNSILRDVTTLDSKNFHVNVIGCKNLTFERFKISAAETSINTDGIHI 162

Query: 64  GRSIGISITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVV 123
           GRS G++I  +   TGDDCISLGDGSK + +TN+TCGPGHGIS+GSLG+Y NEE++ G+ 
Sbjct: 163 GRSDGVNIINTEIKTGDDCISLGDGSKNINITNITCGPGHGISVGSLGRYKNEESVVGIY 222

Query: 124 VNNCTIMNTTNGVRIKTWSASPVAGTATTCIFQTL 159
           V NCTI  + NGVRIKTW  S   G A+   FQ +
Sbjct: 223 VKNCTITGSQNGVRIKTWPKSE-PGEASEMHFQDI 256

[Close]

BLAST of Bhi05G000857 vs. ExPASy Swiss-Prot
Match: Q40312 (Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.7e-42
Identity = 78/146 (53.42%), Postives = 104/146 (71.23%), Query Frame = 0


Query: 13  FNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGISIT 72
           FNF+ NSIV+ +TS DSK F + + GC N+TF G  I AP +SPNTDGI++G+S  + I 
Sbjct: 152 FNFVNNSIVRGVTSKDSKNFHVMVFGCKNITFDGFTITAPGDSPNTDGIHMGKSTDVKIL 211

Query: 73  KSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTIMNT 132
            +   TGDDC+S+GDGSK++ V  V CGPGHG+S+GSLGK+T EE +EG+ V NCT+  T
Sbjct: 212 NTNIGTGDDCVSIGDGSKQITVQGVNCGPGHGLSVGSLGKFTTEENVEGITVKNCTLTAT 271

Query: 133 TNGVRIKTWSASPVAGTATTCIFQTL 159
            NGVRIKTW  +P   T +   F+ +
Sbjct: 272 DNGVRIKTWPDAPGTITVSDIHFEDI 297

[Close]

BLAST of Bhi05G000857 vs. ExPASy Swiss-Prot
Match: Q39766 (Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-42
Identity = 76/132 (57.58%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           ++RF+F+TN++++ ITS DSK F IN+  C N+T   + I AP+ SPNTDGI++G+S G+
Sbjct: 151 NIRFDFVTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 210

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
           +I  S   TGDDCIS+GDG+K + +  +TCGPGHGISIGSLGK+ NEE +EG+ ++NCTI
Sbjct: 211 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 270

Query: 130 MNTTNGVRIKTW 142
            NT+NG RIKTW
Sbjct: 271 TNTSNGARIKTW 282

[Close]

BLAST of Bhi05G000857 vs. ExPASy Swiss-Prot
Match: Q39786 (Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.8e-42
Identity = 76/132 (57.58%), Postives = 104/132 (78.79%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           ++RF+F+TN++++ ITS DSK F IN+  C N+T   + I AP+ SPNTDGI++G+S G+
Sbjct: 151 NIRFDFLTNALIQDITSKDSKLFHINVFACKNITLERLKIEAPDESPNTDGIHMGKSEGV 210

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
           +I  S   TGDDCIS+GDG+K + +  +TCGPGHGISIGSLGK+ NEE +EG+ ++NCTI
Sbjct: 211 NIIASDIKTGDDCISIGDGTKNMVIKEITCGPGHGISIGSLGKFQNEEPVEGIKISNCTI 270

Query: 130 MNTTNGVRIKTW 142
            NT+NG RIKTW
Sbjct: 271 TNTSNGARIKTW 282

[Close]

BLAST of Bhi05G000857 vs. ExPASy Swiss-Prot
Match: Q6H9K0 (Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.4e-41
Identity = 82/149 (55.03%), Postives = 108/149 (72.48%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           +LRF+F+ +++V+ ITSL+SK F IN+L C ++TF  V + AP  S NTDGI++G S G+
Sbjct: 130 NLRFDFLKHAMVRDITSLNSKMFHINVLECEDITFQHVTVTAPGTSINTDGIHVGISKGV 189

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
           +IT ++ ATGDDCIS+G GS+ V +T V CGPGHGISIGSLG+Y NE+ + G+ V  CT 
Sbjct: 190 TITNTKIATGDDCISIGPGSQNVTITQVNCGPGHGISIGSLGRYNNEKEVRGITVKGCTF 249

Query: 130 MNTTNGVRIKTWSASPVAGTATTCIFQTL 159
             T NGVR+KTW  SP  G AT   FQ L
Sbjct: 250 SGTMNGVRVKTWPNSP-PGAATDLTFQDL 277

[Close]

BLAST of Bhi05G000857 vs. ExPASy TrEMBL
Match: A0A5A7UY44 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G00230 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.2e-65
Identity = 127/146 (86.99%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           SLRFNFITNSIV+RITSLDSK F +NILGCNNLTF GVNIIAPE+SPNTDGI+IGRSIGI
Sbjct: 150 SLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFDGVNIIAPEDSPNTDGIHIGRSIGI 209

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
           SI KSR ATGDDCISLGDGSKRVK+TNVTCGPGHGISIGSLGKYTNEE +EGV+V NCTI
Sbjct: 210 SILKSRIATGDDCISLGDGSKRVKITNVTCGPGHGISIGSLGKYTNEEPVEGVIVKNCTI 269

Query: 130 MNTTNGVRIKTWSASPVAGTATTCIF 156
           MNTTNGVRIKTW ASPVAG AT   F
Sbjct: 270 MNTTNGVRIKTWPASPVAGIATNMHF 295

[Close]

BLAST of Bhi05G000857 vs. ExPASy TrEMBL
Match: A0A5D3DD75 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold150G00190 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.2e-65
Identity = 127/146 (86.99%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           SLRFNFITNSIV+RITSLDSK F +NILGCNNLTF GVNIIAPE+SPNTDGI+IGRSIGI
Sbjct: 150 SLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFDGVNIIAPEDSPNTDGIHIGRSIGI 209

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
           SI KSR ATGDDCISLGDGSKRVK+TNVTCGPGHGISIGSLGKYTNEE +EGV+V NCTI
Sbjct: 210 SILKSRIATGDDCISLGDGSKRVKITNVTCGPGHGISIGSLGKYTNEEPVEGVIVKNCTI 269

Query: 130 MNTTNGVRIKTWSASPVAGTATTCIF 156
           MNTTNGVRIKTW ASPVAG AT   F
Sbjct: 270 MNTTNGVRIKTWPASPVAGIATNMHF 295

[Close]

BLAST of Bhi05G000857 vs. ExPASy TrEMBL
Match: A0A1S3C2F4 (exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495704 PE=3 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 4.2e-65
Identity = 127/146 (86.99%), Postives = 134/146 (91.78%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           SLRFNFITNSIV+RITSLDSK F +NILGCNNLTF GVNIIAPE+SPNTDGI+IGRSIGI
Sbjct: 150 SLRFNFITNSIVRRITSLDSKNFHVNILGCNNLTFDGVNIIAPEDSPNTDGIHIGRSIGI 209

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
           SI KSR ATGDDCISLGDGSKRVK+TNVTCGPGHGISIGSLGKYTNEE +EGV+V NCTI
Sbjct: 210 SILKSRIATGDDCISLGDGSKRVKITNVTCGPGHGISIGSLGKYTNEEPVEGVIVKNCTI 269

Query: 130 MNTTNGVRIKTWSASPVAGTATTCIF 156
           MNTTNGVRIKTW ASPVAG AT   F
Sbjct: 270 MNTTNGVRIKTWPASPVAGIATNMHF 295

[Close]

BLAST of Bhi05G000857 vs. ExPASy TrEMBL
Match: A0A0A0K3B7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037910 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63
Identity = 124/149 (83.22%), Postives = 133/149 (89.26%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           SLRF+FITNSIV+RITSLDSK F +NILGCNNLTF GVNIIAPENSPNTDGI+IGRSIGI
Sbjct: 149 SLRFDFITNSIVRRITSLDSKNFHVNILGCNNLTFQGVNIIAPENSPNTDGIHIGRSIGI 208

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
           SI KSR ATGDDCISLGDGSKR+KV NV CGPGHGISIGSLGKY NEE +EGV+VNNCTI
Sbjct: 209 SILKSRIATGDDCISLGDGSKRIKVNNVICGPGHGISIGSLGKYNNEEPVEGVIVNNCTI 268

Query: 130 MNTTNGVRIKTWSASPVAGTATTCIFQTL 159
           +NTTNGVRIKTW ASPVAG AT   F  +
Sbjct: 269 INTTNGVRIKTWPASPVAGIATNMHFSDI 297

[Close]

BLAST of Bhi05G000857 vs. ExPASy TrEMBL
Match: A0A0A0LZ30 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269340 PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 5.2e-63
Identity = 125/151 (82.78%), Postives = 134/151 (88.74%), Query Frame = 0


Query: 10  SLRFNFITNSIVKRITSLDSKKFDINILGCNNLTFHGVNIIAPENSPNTDGIYIGRSIGI 69
           SLRF+FITNSIVKRITSLDSK F +NILGCNNLTF GVNIIAPE+SPNTDGI+IGRSIGI
Sbjct: 2   SLRFDFITNSIVKRITSLDSKNFHVNILGCNNLTFQGVNIIAPEDSPNTDGIHIGRSIGI 61

Query: 70  SITKSRTATGDDCISLGDGSKRVKVTNVTCGPGHGISIGSLGKYTNEEAIEGVVVNNCTI 129
           SI KSR ATGDDCISLGDGSK+VKV NVTCGPGHGISIGSLGKYTNEE +EGV+V NCTI
Sbjct: 62  SILKSRIATGDDCISLGDGSKQVKVANVTCGPGHGISIGSLGKYTNEEPVEGVIVKNCTI 121

Query: 130 MNTTNGVRIKTWSASPVAGTATTCIFQTLKW 161
           MNTTNGVRIKTW    +     TCIFQTL+W
Sbjct: 122 MNTTNGVRIKTWPLLMLV-LPPTCIFQTLQW 151

The following BLAST results are available for this feature:

BLAST of Bhi05G000857 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07840.1	1.4e-44	53.69	Pectin lyase-like superfamily protein	[more]
AT3G07830.1	1.8e-44	52.35	Pectin lyase-like superfamily protein	[more]
AT5G48140.1	4.1e-44	54.36	Pectin lyase-like superfamily protein	[more]
AT3G07820.1	1.2e-43	53.02	Pectin lyase-like superfamily protein	[more]
AT3G07850.1	9.4e-41	53.02	Pectin lyase-like superfamily protein	[more]

BLAST of Bhi05G000857 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P24548	8.8e-44	55.48	Exopolygalacturonase (Fragment) OS=Oenothera organensis OX=3945 PE=2 SV=1	[more]
Q40312	1.7e-42	53.42	Polygalacturonase OS=Medicago sativa OX=3879 PE=2 SV=1	[more]
Q39766	2.2e-42	57.58	Polygalacturonase OS=Gossypium barbadense OX=3634 GN=G9 PE=2 SV=1	[more]
Q39786	2.8e-42	57.58	Polygalacturonase OS=Gossypium hirsutum OX=3635 GN=G9 PE=2 SV=1	[more]
Q6H9K0	1.4e-41	55.03	Exopolygalacturonase (Fragment) OS=Platanus acerifolia OX=140101 GN=plaa2 PE=1 S...	[more]

BLAST of Bhi05G000857 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UY44	4.2e-65	86.99	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A5D3DD75	4.2e-65	86.99	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3C2F4	4.2e-65	86.99	exopolygalacturonase-like OS=Cucumis melo OX=3656 GN=LOC103495704 PE=3 SV=1	[more]
A0A0A0K3B7	1.0e-63	83.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037910 PE=3 SV=1	[more]
A0A0A0LZ30	5.2e-63	82.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G269340 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006626	Parallel beta-helix repeat	SMART	SM00710	pbh1	coord: 89..109 e-value: 2800.0 score: 4.1 coord: 39..65 e-value: 46.0 score: 12.9 coord: 119..140 e-value: 4.5 score: 16.2 coord: 66..87 e-value: 5100.0 score: 2.2
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 3..159 e-value: 1.2E-46 score: 161.1
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 8..153 e-value: 2.4E-46 score: 158.3
IPR000743	Glycoside hydrolase, family 28	PROSITE	PS00502	POLYGALACTURONASE	coord: 96..109
None	No IPR available	PANTHER	PTHR31375:SF132	OS06G0509600 PROTEIN	coord: 8..156
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 8..156
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 7..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000857	Bhi05M000857	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity