Bhi05G000831 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G000831
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr5: 34923608 .. 34923919 (-)
RNA-Seq Expression	Bhi05G000831
Synteny	Bhi05G000831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGCGGGCCCGGAAGGAAAGTAGTTTGTTGTTCAGTCTTGGTATGCGGTATTGTCCAAGTCTTTGATTACTTGACTCAGCCAACCCGCGGAGTTGAACACAAGCCCTTTTTAGTCACGGCCAGGTTCTTCTATCAATCTCGTGGCCCTTGCTTAACTCCTTGTTCTGTAAACCGGTCGCTGGTTGATCTGATCGGACACCGGACACGCGAGAGCCCAGCCCGGGAGGACGGAAAGGACAGAGATATAAAGCAATATAGCCTGTTCGGTGGAAAGAGGGGGTCCGCCAGAGGAAATGCAAGACGATAG

mRNA sequence

ATGGGAAGCGGGCCCGGAAGGAAAGTAGTTTGTTGTTCAGTCTTGGTATGCGGTATTGTCCAAGTCTTTGATTACTTGACTCAGCCAACCCGCGGAGTTGAACACAAGCCCTTTTTAGTCACGGCCAGGTTCTTCTATCAATCTCGTGGCCCTTGCTTAACTCCTTGTTCTGTAAACCGGTCGCTGGTTGATCTGATCGGACACCGGACACGCGAGAGCCCAGCCCGGGAGGACGGAAAGGACAGAGATATAAAGCAATATAGCCTGTTCGGTGGAAAGAGGGGGTCCGCCAGAGGAAATGCAAGACGATAG

Coding sequence (CDS)

ATGGGAAGCGGGCCCGGAAGGAAAGTAGTTTGTTGTTCAGTCTTGGTATGCGGTATTGTCCAAGTCTTTGATTACTTGACTCAGCCAACCCGCGGAGTTGAACACAAGCCCTTTTTAGTCACGGCCAGGTTCTTCTATCAATCTCGTGGCCCTTGCTTAACTCCTTGTTCTGTAAACCGGTCGCTGGTTGATCTGATCGGACACCGGACACGCGAGAGCCCAGCCCGGGAGGACGGAAAGGACAGAGATATAAAGCAATATAGCCTGTTCGGTGGAAAGAGGGGGTCCGCCAGAGGAAATGCAAGACGATAG

Protein sequence

MGSGPGRKVVCCSVLVCGIVQVFDYLTQPTRGVEHKPFLVTARFFYQSRGPCLTPCSVNRSLVDLIGHRTRESPAREDGKDRDIKQYSLFGGKRGSARGNARR

Homology

[Close]

BLAST of Bhi05G000831 vs. ExPASy TrEMBL
Match: A0A0D2LZI2 (Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_001G168300 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 7.5e-15
Identity = 42/51 (82.35%), Postives = 44/51 (86.27%), Query Frame = 0


Query: 28  QPTRGVEHKPFLVTARFFYQSRGPCLTPCSVNRSLVDLIGHRTRESPARED 79
           QPTRGVE    L +ARFFYQS GPCLTPCSVNRSLVDLIG RTRESPARE+
Sbjct: 166 QPTRGVELNTTLTSARFFYQSPGPCLTPCSVNRSLVDLIGPRTRESPAREE 216

[Close]

BLAST of Bhi05G000831 vs. ExPASy TrEMBL
Match: A0A2I0HZ57 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042614 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 7.3e-10
Identity = 33/42 (78.57%), Postives = 37/42 (88.10%), Query Frame = 0


Query: 39  LVTARFFYQSRGPCLTPCSVNRSLVDLIGHRTRESPAREDGK 81
           L +ARF YQ+ GPCLTPCSVNRSL+DLIG RTRESPARE+ K
Sbjct: 88  LTSARFNYQAPGPCLTPCSVNRSLIDLIGPRTRESPAREEAK 129

The following BLAST results are available for this feature:

BLAST of Bhi05G000831 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05G000831 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05G000831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0D2LZI2	7.5e-15	82.35	Uncharacterized protein (Fragment) OS=Gossypium raimondii OX=29730 GN=B456_001G1...	[more]
A0A2I0HZ57	7.3e-10	78.57	Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_042614 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000831	Bhi05M000831	mRNA