Bhi05G000815 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G000815
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	RING-type domain-containing protein
Location	chr5: 34348468 .. 34349232 (+)
RNA-Seq Expression	Bhi05G000815
Synteny	Bhi05G000815

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCACAACTCTTTGATATTTGTAGGAATGGTTCCTATGTTGGCATGTCACTAGATATTAGAGATCTCATCATAAATCGCCAACCACGAAGACGAATTCGAACTCGACGAAACTCATCAACGTTCGTCAAACGACTCGACCTTAATTTTAAAGTCCAACTCAAATGTAGTCACTACCAAGTATGTGAAGAAGGCAATAGGAGTACAACGACTCTACTCTGTGAACACACAACTTCACAATATCCCCTTGCAAATTACCAACTTCCAATCTCCATCTTCAAGCACCATGACAAAACGTTGGAGCGATTTCTTCTTCGTCAGTTTCAGATGAATCGAGACTTCATCAACATTAAATTTGTGGCTGACAAAATAATACAACATTGGATTAGAAAAGTTGAAGAAGAGAACGATTTTAGTGTATTTCAAAAGATTCATCCTCTCAAAATCACGATAGAGTTGTTGGCTTTTCAGAGAGTTTATGTATTTGAATCATCACCAATGATGGTTCCAACGAGTGATAGTGCGATGAAGAATATGTTAAAGAGAGTGGAAATTGAAGAGATAATGAAATTAGGTGAGGATGAAGGCATTGATTGTGTAATTTGTTTGGAGGAAATTAGTAGAGAGGAGGAAGGAAAAAGTGGGATATTGGTGTTACAAATGCCTTGCTTGCATGTGTTTCATGGAGAATGTATAAGGAAGTGGTTGGAGACTAGTCATTATTGTCCAACTTGTAGATTTGCAATGCCTACAAATAATTGA

mRNA sequence

ATGGCGGCACAACTCTTTGATATTTGTAGGAATGGTTCCTATGTTGGCATGTCACTAGATATTAGAGATCTCATCATAAATCGCCAACCACGAAGACGAATTCGAACTCGACGAAACTCATCAACGTTCGTCAAACGACTCGACCTTAATTTTAAAGTCCAACTCAAATGTAGTCACTACCAAGTATGTGAAGAAGGCAATAGGAGTACAACGACTCTACTCTGTGAACACACAACTTCACAATATCCCCTTGCAAATTACCAACTTCCAATCTCCATCTTCAAGCACCATGACAAAACGTTGGAGCGATTTCTTCTTCGTCAGTTTCAGATGAATCGAGACTTCATCAACATTAAATTTGTGGCTGACAAAATAATACAACATTGGATTAGAAAAGTTGAAGAAGAGAACGATTTTAGTGTATTTCAAAAGATTCATCCTCTCAAAATCACGATAGAGTTGTTGGCTTTTCAGAGAGTTTATGTATTTGAATCATCACCAATGATGGTTCCAACGAGTGATAGTGCGATGAAGAATATGTTAAAGAGAGTGGAAATTGAAGAGATAATGAAATTAGGTGAGGATGAAGGCATTGATTGTGTAATTTGTTTGGAGGAAATTAGTAGAGAGGAGGAAGGAAAAAGTGGGATATTGGTGTTACAAATGCCTTGCTTGCATGTGTTTCATGGAGAATGTATAAGGAAGTGGTTGGAGACTAGTCATTATTGTCCAACTTGTAGATTTGCAATGCCTACAAATAATTGA

Coding sequence (CDS)

ATGGCGGCACAACTCTTTGATATTTGTAGGAATGGTTCCTATGTTGGCATGTCACTAGATATTAGAGATCTCATCATAAATCGCCAACCACGAAGACGAATTCGAACTCGACGAAACTCATCAACGTTCGTCAAACGACTCGACCTTAATTTTAAAGTCCAACTCAAATGTAGTCACTACCAAGTATGTGAAGAAGGCAATAGGAGTACAACGACTCTACTCTGTGAACACACAACTTCACAATATCCCCTTGCAAATTACCAACTTCCAATCTCCATCTTCAAGCACCATGACAAAACGTTGGAGCGATTTCTTCTTCGTCAGTTTCAGATGAATCGAGACTTCATCAACATTAAATTTGTGGCTGACAAAATAATACAACATTGGATTAGAAAAGTTGAAGAAGAGAACGATTTTAGTGTATTTCAAAAGATTCATCCTCTCAAAATCACGATAGAGTTGTTGGCTTTTCAGAGAGTTTATGTATTTGAATCATCACCAATGATGGTTCCAACGAGTGATAGTGCGATGAAGAATATGTTAAAGAGAGTGGAAATTGAAGAGATAATGAAATTAGGTGAGGATGAAGGCATTGATTGTGTAATTTGTTTGGAGGAAATTAGTAGAGAGGAGGAAGGAAAAAGTGGGATATTGGTGTTACAAATGCCTTGCTTGCATGTGTTTCATGGAGAATGTATAAGGAAGTGGTTGGAGACTAGTCATTATTGTCCAACTTGTAGATTTGCAATGCCTACAAATAATTGA

Protein sequence

MAAQLFDICRNGSYVGMSLDIRDLIINRQPRRRIRTRRNSSTFVKRLDLNFKVQLKCSHYQVCEEGNRSTTTLLCEHTTSQYPLANYQLPISIFKHHDKTLERFLLRQFQMNRDFINIKFVADKIIQHWIRKVEEENDFSVFQKIHPLKITIELLAFQRVYVFESSPMMVPTSDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFHGECIRKWLETSHYCPTCRFAMPTNN

Homology

[Close]

BLAST of Bhi05G000815 vs. TAIR 10
Match: AT3G46620.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-10
Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 171 PTSDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFHG 230
           P S SA+++ L RVEI +     E    +C +C E      EG+      +MPC H+FHG
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVFEAGIEGR------EMPCKHIFHG 249

Query: 231 ECIRKWLETSHYCPTCRFAMPTN 254
           +CI  WL   + CP CRF +P++
Sbjct: 250 DCIVPWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of Bhi05G000815 vs. TAIR 10
Match: AT1G18770.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.6e-10
Identity = 31/81 (38.27%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 171 PTSDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFHG 230
           P S   +K++ +++        GE     C+ICLEE S       G  V+ +PC H F  
Sbjct: 34  PASKLVVKSLARKIYKMTTSSTGE----MCIICLEEFS------EGRRVVTLPCGHDFDD 93

Query: 231 ECIRKWLETSHYCPTCRFAMP 252
           EC+ KW ET+H CP CRF +P
Sbjct: 94  ECVLKWFETNHSCPLCRFKLP 104

[Close]

BLAST of Bhi05G000815 vs. TAIR 10
Match: AT1G74620.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 173 SDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFHGEC 232
           ++ A +N+L        + +   E   C IC+E+     EG S  +V ++PC H FHG+C
Sbjct: 156 ANKAAENLLIDSYCYNYLNVATTEENGCAICMEDYI---EGSS--IVAKLPCDHEFHGDC 215

Query: 233 IRKWLETSHYCPTCRFAMP 252
           I KWL+ +H CP CR ++P
Sbjct: 216 INKWLQLNHMCPLCRSSIP 229

[Close]

BLAST of Bhi05G000815 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09
Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 171 PTSDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFHG 230
           P S SA+ + L  V++ + M   + E   C +C++E    E+G     V QMPC HVFH 
Sbjct: 190 PASKSAI-DALPTVKVTKDML--KSEMNQCAVCMDEF---EDGSD---VKQMPCKHVFHQ 249

Query: 231 ECIRKWLETSHYCPTCRFAMPTNN 255
           +C+  WLE  + CP CRF +PT++
Sbjct: 250 DCLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of Bhi05G000815 vs. TAIR 10
Match: AT5G01980.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-09
Identity = 31/85 (36.47%), Postives = 46/85 (54.12%), Query Frame = 0


Query: 171 PTSDSAMKNMLKRVEIEE-IMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFH 230
           P S S ++N+ + +  EE +MK     G+ C IC E  S   E        Q+PCLH++H
Sbjct: 325 PASVSCVRNLPRVIIAEEHVMK-----GLVCAICKELFSLRNE------TTQLPCLHLYH 384

Query: 231 GECIRKWLETSHYCPTCRFAMPTNN 255
             CI  WL   + CP CR+ +PT++
Sbjct: 385 AHCIVPWLSARNSCPLCRYELPTDD 398

[Close]

BLAST of Bhi05G000815 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.9e-09
Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 0


Query: 171 PTSDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFHG 230
           P S SA+++ L RVEI +     E    +C +C E      EG+      +MPC H+FHG
Sbjct: 190 PASKSAIES-LPRVEISDCHTKAE---ANCAVCTEVFEAGIEGR------EMPCKHIFHG 249

Query: 231 ECIRKWLETSHYCPTCRFAMPTN 254
           +CI  WL   + CP CRF +P++
Sbjct: 250 DCIVPWLSIRNSCPVCRFELPSD 262

[Close]

BLAST of Bhi05G000815 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.5e-08
Identity = 33/84 (39.29%), Postives = 49/84 (58.33%), Query Frame = 0


Query: 171 PTSDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFHG 230
           P S SA+ + L  V++ + M   + E   C +C++E    E+G     V QMPC HVFH 
Sbjct: 190 PASKSAI-DALPTVKVTKDML--KSEMNQCAVCMDEF---EDGSD---VKQMPCKHVFHQ 249

Query: 231 ECIRKWLETSHYCPTCRFAMPTNN 255
           +C+  WLE  + CP CRF +PT++
Sbjct: 250 DCLLPWLELHNSCPVCRFELPTDD 264

[Close]

BLAST of Bhi05G000815 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08
Identity = 31/70 (44.29%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 184 VEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFHGECIRKWLETSHYC 243
           ++   I+++   EG +CVICLEE   EE       V +MPC H FHG CI KWL     C
Sbjct: 98  IDAMPIVEIDGCEG-ECVICLEEWKSEE------TVKEMPCKHRFHGGCIEKWLGFHGSC 157

Query: 244 PTCRFAMPTN 254
           P CR+ MP +
Sbjct: 158 PVCRYEMPVD 160

[Close]

BLAST of Bhi05G000815 vs. ExPASy Swiss-Prot
Match: Q7ZW78 (E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2)

HSP 1 Score: 61.2 bits (147), Expect = 1.9e-08
Identity = 28/79 (35.44%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 176 AMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFHGECIRK 235
           A K +++ + +  I     D+G+ C +CL E   +E       V +MPC H+FH  CI  
Sbjct: 55  AAKAVVQSLPVVIISPEQADKGVKCPVCLLEFEEQES------VREMPCKHLFHTGCILP 114

Query: 236 WLETSHYCPTCRFAMPTNN 255
           WL  ++ CP CR  +PT+N
Sbjct: 115 WLNKTNSCPLCRLELPTDN 127

[Close]

BLAST of Bhi05G000815 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.3e-08
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 0


Query: 171 PTSDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFHG 230
           P S SA+++ L RVEI +   +G +   +C +C E    E E +      +MPC H+FH 
Sbjct: 174 PASKSAIES-LPRVEISD-CHIGSE--ANCAVCTEIFETETEAR------EMPCKHLFHD 233

Query: 231 ECIRKWLETSHYCPTCRFAMPT 253
           +CI  WL   + CP CRF +P+
Sbjct: 234 DCIVPWLSIRNSCPVCRFELPS 245

[Close]

BLAST of Bhi05G000815 vs. ExPASy TrEMBL
Match: A0A5A7SPE2 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold139G001670 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 6.0e-82
Identity = 160/266 (60.15%), Postives = 208/266 (78.20%), Query Frame = 0


Query: 1   MAAQLFDICRNGSYVGMSLDIRDLIIN-RQPRRRIRTRRNSSTFVKRLDLNFKVQLKCSH 60
           MAAQ+F+ICRN  +VGMSL+I D I +  + R+RIRTR+NSS +V+ +DLNFKVQLKCSH
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  YQVCEEGNRSTTTLLCEHTTSQYPLANYQLPISIFKHHDKTLERFLLRQFQMNRDFINIK 120
           + V E+G  +TT+ L EHT+  +PLA Y+LPISIFKH DK LE++L  +F + R+FINI 
Sbjct: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINIT 120

Query: 121 FVADKIIQHWIRKVEEE----------NDFSVFQKIHPLKITIELLAFQRVYVFESSPM- 180
            VAD++IQHW+++VEE+          +DF+VFQKI+PL+IT+E+   QR YV ES  M 
Sbjct: 121 LVADRLIQHWVKRVEEDDHEYQEENNNHDFNVFQKIYPLEITLEMQIIQR-YVEESPIMI 180

Query: 181 MVPTSDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVF 240
           MVPTSDSA+++ML+RVE +      +DEGI+CVICLEEIS +EE ++   VLQMPCLH+F
Sbjct: 181 MVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEETEKSVLQMPCLHMF 240

Query: 241 HGECIRKWLETSHYCPTCRFAMPTNN 255
           HGECI KWL+TSHYCPTCRF+MPTNN
Sbjct: 241 HGECINKWLKTSHYCPTCRFSMPTNN 260

[Close]

BLAST of Bhi05G000815 vs. ExPASy TrEMBL
Match: A0A5D3C6D9 (Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001660 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 1.0e-81
Identity = 160/266 (60.15%), Postives = 207/266 (77.82%), Query Frame = 0


Query: 1   MAAQLFDICRNGSYVGMSLDIRDLIIN-RQPRRRIRTRRNSSTFVKRLDLNFKVQLKCSH 60
           MAAQ+F+ICRN  +VGMSL+I D I +  + R+RIRTR+NSS +V+ +DLNFKVQLKCSH
Sbjct: 1   MAAQIFNICRNRPFVGMSLEINDSITSMNRTRKRIRTRQNSSKYVQHIDLNFKVQLKCSH 60

Query: 61  YQVCEEGNRSTTTLLCEHTTSQYPLANYQLPISIFKHHDKTLERFLLRQFQMNRDFINIK 120
           + V E+G  +TT+ L EHT+  +PLA Y+LPISIFKH DK LE++L  +F + R+FIN  
Sbjct: 61  FLVYEDGITTTTSFLNEHTSRPHPLATYKLPISIFKHGDKALEQYLFHKFHVYREFINTT 120

Query: 121 FVADKIIQHWIRKVEEE----------NDFSVFQKIHPLKITIELLAFQRVYVFESSPM- 180
            VAD++IQHW+++VEE+          +DF+VFQKI+PL+IT+E+   QR YV ES  M 
Sbjct: 121 LVADRLIQHWVKRVEEDDHEHQEENNNHDFNVFQKIYPLEITLEMRIIQR-YVEESPIMI 180

Query: 181 MVPTSDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVF 240
           MVPTSDSA+++ML+RVE +      +DEGI+CVICLEEIS +EE +S   VLQMPCLH+F
Sbjct: 181 MVPTSDSAIESMLRRVEND-----WDDEGINCVICLEEISSKEEEESEKSVLQMPCLHMF 240

Query: 241 HGECIRKWLETSHYCPTCRFAMPTNN 255
           HGECI KWL+TSHYCPTCRF+MPTNN
Sbjct: 241 HGECINKWLKTSHYCPTCRFSMPTNN 260

[Close]

BLAST of Bhi05G000815 vs. ExPASy TrEMBL
Match: A0A0A0K2A5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.3e-81
Identity = 160/264 (60.61%), Postives = 199/264 (75.38%), Query Frame = 0


Query: 1   MAAQLFDICRNGSYVGMSLDI-RDLIINRQPRRRIRTRRNSSTFVKRLDLNFKVQLKCSH 60
           MA ++FD CR GSY+GM L I  D +  R+P+ +IRTRRNS TF K++DLNF+VQLKC H
Sbjct: 1   MAERIFDRCRCGSYMGMKLRICDDPVQRRRPQTQIRTRRNSPTFFKQIDLNFEVQLKCQH 60

Query: 61  YQVCEEGNRSTTTLLCEHTTSQYPLANYQLPISIFKHHDKTLERFLLRQFQMNRDFINIK 120
           +Q+ EE   +TTTL+ EH  SQ+P A ++LPISI +H DKTL+  L R+F M RD INI+
Sbjct: 61  FQIREEETSNTTTLIDEHIVSQHPFATFRLPISILEHGDKTLKLLLFREFHMYRDIINIE 120

Query: 121 FVADKIIQHWIRKVEEEND-------FSVFQKIHPLKITIELLAFQRVYVFESSP---MM 180
            + D+II++W+ KVEEE +         VF+KI+ L+IT+ELL FQ V V +  P   MM
Sbjct: 121 HLVDEIIKYWVTKVEEEEEDQENSTSSRVFKKIYRLEITLELLIFQIVRVMDYQPQVLMM 180

Query: 181 VPTSDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLHVFH 240
           VPTSDSAM++MLKRVE EEIMKLG+D+ I CVICLEEI +EE+G  G+ VLQMPCLHVFH
Sbjct: 181 VPTSDSAMESMLKRVENEEIMKLGDDDCIHCVICLEEIGKEEKGSEGV-VLQMPCLHVFH 240

Query: 241 GECIRKWLETSHYCPTCRFAMPTN 254
           GECI KWL TSHYCPTCRF MP N
Sbjct: 241 GECINKWLNTSHYCPTCRFPMPIN 263

[Close]

BLAST of Bhi05G000815 vs. ExPASy TrEMBL
Match: A0A0A0K7L0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 6.3e-79
Identity = 154/268 (57.46%), Postives = 200/268 (74.63%), Query Frame = 0


Query: 1   MAAQLFDICR--NGSYVGMSLDIRDLIINRQPRRRIRTRRNSSTFVKRLDLNFKVQLKCS 60
           MA Q+F  CR  +GSY+GMSL I D  +  QP+ +IRT  NS T VK++DLNFKV++KC 
Sbjct: 1   MAEQIFGPCRYGSGSYIGMSLRITDPDLRHQPQSQIRTPPNSPTLVKQIDLNFKVEVKCQ 60

Query: 61  HYQVCEEGNRST--TTLLCEHTTSQYPLANYQLPISIFKHHDKTLERFLLRQFQMNRDFI 120
           HY    EG  ST  T LL EH +S +PL   QLP+SIFKH DKTL+R L R+FQ+ R  I
Sbjct: 61  HYFQAGEGGNSTFATALLSEHISSHHPLPTLQLPVSIFKHGDKTLKRLLFREFQIYRAII 120

Query: 121 NIKFVADKIIQHWIRKVEEENDFS-VFQKIHPLKITIELLAFQRVYVFES---------S 180
           NI+ V D+II+HW++KV+EEN  S VF++I+PL+ITIELL +Q ++  +           
Sbjct: 121 NIELVVDEIIKHWVKKVDEENSTSQVFEEIYPLEITIELLVYQMIHAIDQPHEIMMDQPQ 180

Query: 181 PMMVPTSDSAMKNMLKRVEIEEIMKLGEDEGIDCVICLEEISREEEGKSGILVLQMPCLH 240
            MMVPTS+SAM++MLK+VE EEI+K G+++ I+CVICLEEIS+E++G   + VLQMPCLH
Sbjct: 181 VMMVPTSESAMESMLKKVENEEIVKFGDNKSINCVICLEEISKEKKGSEAV-VLQMPCLH 240

Query: 241 VFHGECIRKWLETSHYCPTCRFAMPTNN 255
           +FH ECIRKWL+ SHYCPTCRF+MPTNN
Sbjct: 241 MFHEECIRKWLKRSHYCPTCRFSMPTNN 267

[Close]

BLAST of Bhi05G000815 vs. ExPASy TrEMBL
Match: A0A0A0K7L5 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.9e-76
Identity = 159/270 (58.89%), Postives = 205/270 (75.93%), Query Frame = 0


Query: 1   MAAQLFDICRNGSYVGMSLDIRDLIIN-RQPRRRIRTRRNSSTFVKRLDLNFKVQLKCSH 60
           MAAQ+FD+C N  +VGMSL I+D I +  + R+RIRTRRNSS +V+ +DLNFKVQL+C+H
Sbjct: 1   MAAQIFDMCMNRPFVGMSLKIKDSITSLHRTRKRIRTRRNSSKYVEHIDLNFKVQLRCTH 60

Query: 61  -YQVCEEGNRSTTTLLCEHTTSQYPLANYQLPISIFKHHDKTLERFLLRQFQMNRDFINI 120
             Q  E+G  +TT+ L EHT+S +PLA YQLPISIFK+ + TLE++L  +   +R+ I+I
Sbjct: 61  VLQEYEDGIMTTTSFLHEHTSSSHPLATYQLPISIFKNGNSTLEQYLCDRLHAHRELIDI 120

Query: 121 KFVADKIIQHWIRKVEEEN----------DFSVFQKIHPLKITIELLAFQRVYVFESSPM 180
             VAD+IIQHW++KVEE++          DF+VFQKIH L+IT+E +   R YV ES  M
Sbjct: 121 TLVADRIIQHWVKKVEEDDCDHDEEENNEDFNVFQKIHSLEITLE-MKINRRYVVESPVM 180

Query: 181 -MVPTSDSAMKNMLKRVEIEEIMKLG-EDEGIDCVICLEEIS--REEEGKSGILVLQMPC 240
            MVPTSD A+++ML+RVE +EI +LG ++EGI+C ICLEEIS  +EEEG S   VLQMPC
Sbjct: 181 IMVPTSDDAIESMLRRVENDEIRRLGCDEEGIECAICLEEISSDKEEEG-SEKSVLQMPC 240

Query: 241 LHVFHGECIRKWLETSHYCPTCRFAMPTNN 255
           LH+FH ECI KWL TSHYCPTCRF+MPTNN
Sbjct: 241 LHMFHEECIDKWLRTSHYCPTCRFSMPTNN 268

The following BLAST results are available for this feature:

BLAST of Bhi05G000815 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46620.1	2.1e-10	38.55	zinc finger (C3HC4-type RING finger) family protein	[more]
AT1G18770.1	3.6e-10	38.27	RING/U-box superfamily protein	[more]
AT1G74620.1	1.0e-09	36.71	RING/U-box superfamily protein	[more]
AT3G19950.1	1.0e-09	39.29	RING/U-box superfamily protein	[more]
AT5G01980.1	1.0e-09	36.47	RING/U-box superfamily protein	[more]

BLAST of Bhi05G000815 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SNB6	2.9e-09	38.55	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]
Q8LPN7	1.5e-08	39.29	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9LQX2	1.9e-08	44.29	E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 ...	[more]
Q7ZW78	1.9e-08	35.44	E3 ubiquitin-protein ligase RNF181 OS=Danio rerio OX=7955 GN=rnf181 PE=2 SV=2	[more]
Q940T5	4.3e-08	37.80	E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 ...	[more]

BLAST of Bhi05G000815 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SPE2	6.0e-82	60.15	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3C6D9	1.0e-81	60.15	Putative zinc finger protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0K2A5	1.3e-81	60.61	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068580 P...	[more]
A0A0A0K7L0	6.3e-79	57.46	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G067560 P...	[more]
A0A0A0K7L5	2.9e-76	58.89	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G068590 P...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 200..246 e-value: 1.7E-7 score: 40.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 199..247 e-value: 6.5E-13 score: 48.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 200..247 score: 12.784338
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 199..247 e-value: 0.0086 score: 7.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 163..253 e-value: 1.8E-18 score: 68.0
None	No IPR available	PANTHER	PTHR15710:SF77	OS07G0631200 PROTEIN	coord: 120..252
None	No IPR available	PANTHER	PTHR15710	E3 UBIQUITIN-PROTEIN LIGASE PRAJA	coord: 120..252
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 183..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000815	Bhi05M000815	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0008270	zinc ion binding