Bhi05G000807 (gene) Wax gourd (B227) v1

Overview
NameBhi05G000807
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionCYSTM domain-containing protein
Locationchr5: 34195566 .. 34196245 (-)
RNA-Seq ExpressionBhi05G000807
SyntenyBhi05G000807
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGATCCCAAATATGCCTATCCCTATCCACCTCCTCAAGGTATTTTTCTCACACGTTTCGGCTGTTGAGCTATATTCATGTTAACCTCTTTCTAAGTTTCGTTTGATTTAGTATTTTGGATGTTGTGAATTTAAATGTAGGAGGGTATTATCAAGGGCCGCCCGTGATGGCACCACCGCAATACGCTGCCCCACCGCCCAGAAGACAACCGGGCTTCTTGGAGGGATGGTATGCCAAAAAGCTTGTTCTTTGTTGAAACGGTTTTGGTTTTGAGGGAGTTAGGATGATTAAAAAAAACTAACATCCGTACTGGTTTATCCAAAGTAAAATACGTCTAATTTATGCTAGCGCGATAGAATATAGTTCATTATATAAAGATGAACTATAAAGAATAATGTATGAGCATCTGGACGCTAGGAGTGGTGTCGAGACGCTTCGAGTAGAGCATTCTGCCTTCGATTCGGCTTCTTGACATTCTCCTTTCTCGAGCTGTAACTATATCTAAGTGACAAGATCATAGCGTCTAGACGCTACGAACATTAAACTACATGTTTGCTTTGGCTTCTATGTTTTTTACTGTATGGCTAAGAGAGGGTTTAATTTTGTGTTTGCAGCCTTGCAGCTCTGTGCTGCTGTTGTCTCCTTGATGAGTGTTGCTGTGACCCTTCCATTATCT

mRNA sequence

ATGAGTGATCCCAAATATGCCTATCCCTATCCACCTCCTCAAGGAGGGTATTATCAAGGGCCGCCCGTGATGGCACCACCGCAATACGCTGCCCCACCGCCCAGAAGACAACCGGGCTTCTTGGAGGGATGCCTTGCAGCTCTGTGCTGCTGTTGTCTCCTTGATGAGTGTTGCTGTGACCCTTCCATTATCT

Coding sequence (CDS)

ATGAGTGATCCCAAATATGCCTATCCCTATCCACCTCCTCAAGGAGGGTATTATCAAGGGCCGCCCGTGATGGCACCACCGCAATACGCTGCCCCACCGCCCAGAAGACAACCGGGCTTCTTGGAGGGATGCCTTGCAGCTCTGTGCTGCTGTTGTCTCCTTGATGAGTGTTGCTGTGACCCTTCCATTATCT

Protein sequence

MSDPKYAYPYPPPQGGYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLLDECCCDPSII
Homology
BLAST of Bhi05G000807 vs. TAIR 10
Match: AT4G33660.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 90.5 bits (223), Expect = 5.3e-19
Identity = 50/74 (67.57%), Postives = 53/74 (71.62%), Query Frame = 0

Query: 1  MSDPKYAYPYPPPQGGYYQG--PPVMAPPQY--------AAPPPRRQPGFLEGCLAALCC 60
          MSDPKYAYPYP P G Y QG  PPV  PPQY          PPP R+ GFLEG LAALCC
Sbjct: 1  MSDPKYAYPYPAP-GNYPQGPPPPVGVPPQYYPPPPPPPPPPPPPRKVGFLEGLLAALCC 60

Query: 61 CCLLDECCCDPSII 65
          CCL+DECCCDP+II
Sbjct: 61 CCLVDECCCDPTII 73

BLAST of Bhi05G000807 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 58.5 bits (140), Expect = 2.2e-09
Identity = 38/65 (58.46%), Postives = 39/65 (60.00%), Query Frame = 0

Query: 4  PKYAYP---YPP---PQGGY-YQGPPVMAPPQYAAPPPRRQ----PGFLEGCLAALCCCC 58
          P   YP   YPP   PQ GY  QG P    PQY  PP  +Q    PGFLEGCLAALCCCC
Sbjct: 33 PPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCC 92

BLAST of Bhi05G000807 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 8.4e-09
Identity = 36/63 (57.14%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 4  PKYAYP---YPP---PQGGYYQGPPVMA--PPQYA-APPPRRQPGFLEGCLAALCCCCLL 58
          PK  YP   YPP   P  GY QG P     PPQY+ AP  ++  G LEGCLAALCCCCLL
Sbjct: 19 PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQYSQAPQQKQNAGMLEGCLAALCCCCLL 78

BLAST of Bhi05G000807 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 5.1e-06
Identity = 34/86 (39.53%), Postives = 39/86 (45.35%), Query Frame = 0

Query: 4   PKYAYP---YPPPQGGY-----------------------YQGPPVMAPPQYAAPPPRRQ 58
           P+  YP   YPPPQ GY                       YQGPP   PP Y   PP+ +
Sbjct: 41  PQAGYPPAGYPPPQQGYGQGYPAQGYPPPQYPQGHPPQYPYQGPP---PPHYGQAPPKNK 100

BLAST of Bhi05G000807 vs. TAIR 10
Match: AT2G32190.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G32210.1); Has 218 Blast hits to 218 proteins in 24 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 16; Plants - 202; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.7 bits (104), Expect = 3.3e-05
Identity = 27/59 (45.76%), Postives = 33/59 (55.93%), Query Frame = 0

Query: 7  AYPYPPPQGGYYQGPPVMAPP----QYAAPPP----RRQPGFLEGCLAALCCCCLLDEC 58
          AYP PP   G Y  PP +  P     +A   P     +  GFL+GCLAA+CCCC+LD C
Sbjct: 12 AYPTPPVSTGPYMTPPPLGYPTSDISHATVAPVETKSKGDGFLKGCLAAMCCCCVLDAC 70

BLAST of Bhi05G000807 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 3.1e-08
Identity = 38/65 (58.46%), Postives = 39/65 (60.00%), Query Frame = 0

Query: 4  PKYAYP---YPP---PQGGY-YQGPPVMAPPQYAAPPPRRQ----PGFLEGCLAALCCCC 58
          P   YP   YPP   PQ GY  QG P    PQY  PP  +Q    PGFLEGCLAALCCCC
Sbjct: 33 PPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQYPPPPQHQQQQSSPGFLEGCLAALCCCC 92

BLAST of Bhi05G000807 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.2e-07
Identity = 36/63 (57.14%), Postives = 39/63 (61.90%), Query Frame = 0

Query: 4  PKYAYP---YPP---PQGGYYQGPPVMA--PPQYA-APPPRRQPGFLEGCLAALCCCCLL 58
          PK  YP   YPP   P  GY QG P     PPQY+ AP  ++  G LEGCLAALCCCCLL
Sbjct: 19 PKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQYSQAPQQKQNAGMLEGCLAALCCCCLL 78

BLAST of Bhi05G000807 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 48.1 bits (113), Expect = 4.2e-05
Identity = 36/79 (45.57%), Postives = 40/79 (50.63%), Query Frame = 0

Query: 4   PKYAYP----------YPPPQG---------GY-YQGPPVMAPPQYAAPPPRRQ-----P 58
           PK AYP          YPPPQG         GY  QG P    PQ   PP ++Q     P
Sbjct: 22  PKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYPEQGYPQQGYPPQQQQQQKHSP 81

BLAST of Bhi05G000807 vs. ExPASy TrEMBL
Match: A0A314Y8T5 (CYSTM domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_05607 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.7e-26
Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = 0

Query: 1  MSDPKYAYPYPPP-QGGYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLLDECCC 60
          MSDPKY YPYP   QGGYYQGPPVMAPPQYAAPPPRR+PGFLEGCLAALCCCCL+DECCC
Sbjct: 1  MSDPKYGYPYPAQGQGGYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLIDECCC 60

Query: 61 DPSII 65
          DPS++
Sbjct: 61 DPSVL 65

BLAST of Bhi05G000807 vs. ExPASy TrEMBL
Match: B9SMJ5 (CYSTM domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0230320 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.3e-25
Identity = 59/64 (92.19%), Postives = 60/64 (93.75%), Query Frame = 0

Query: 1  MSDPKYAYPYPPPQGGYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYP    GYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCL+DECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLIDECCCD 60

Query: 61 PSII 65
          PSII
Sbjct: 61 PSII 62

BLAST of Bhi05G000807 vs. ExPASy TrEMBL
Match: A0A6J5XT78 (CYSTM domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS39353 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-25
Identity = 56/65 (86.15%), Postives = 61/65 (93.85%), Query Frame = 0

Query: 1  MSDPKYAYPYPPP-QGGYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLLDECCC 60
          M+DPKY YPYP   QGGYYQGPPVMAPPQYAAPPPRR+PGFLEGCLAALCCCCL+DECCC
Sbjct: 1  MNDPKYGYPYPAQGQGGYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLIDECCC 60

Query: 61 DPSII 65
          DPS++
Sbjct: 61 DPSVL 65

BLAST of Bhi05G000807 vs. ExPASy TrEMBL
Match: A0A1U8A0R0 (uncharacterized protein LOC104595564 OS=Nelumbo nucifera OX=4432 GN=LOC104595564 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-25
Identity = 59/64 (92.19%), Postives = 60/64 (93.75%), Query Frame = 0

Query: 1   MSDPKYAYPYPPPQGGYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLLDECCCD 60
           MSDPKYAYPYP    GYYQGPPVMAPPQYAAPPPRR+PGFLEGCLAALCCCCLLDECCCD
Sbjct: 92  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLLDECCCD 151

Query: 61  PSII 65
           PSII
Sbjct: 152 PSII 153

BLAST of Bhi05G000807 vs. ExPASy TrEMBL
Match: A0A2P5FH35 (Cysteine-rich transmembrane CYSTM domain containing protein OS=Trema orientale OX=63057 GN=TorRG33x02_071570 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-25
Identity = 59/64 (92.19%), Postives = 60/64 (93.75%), Query Frame = 0

Query: 1  MSDPKYAYPYPPPQGGYYQGPPVMAPPQYAAPPPRRQPGFLEGCLAALCCCCLLDECCCD 60
          MSDPKYAYPYP    GYYQGPPVMAPPQYAAPPPRR+PGFLEGCLAALCCCCLLDECCCD
Sbjct: 1  MSDPKYAYPYPAQ--GYYQGPPVMAPPQYAAPPPRREPGFLEGCLAALCCCCLLDECCCD 60

Query: 61 PSII 65
          PSII
Sbjct: 61 PSII 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G33660.15.3e-1967.57unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
AT2G41420.12.2e-0958.46proline-rich family protein [more]
AT5G67600.18.4e-0957.14unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;... [more]
AT3G49845.15.1e-0639.53unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G32190.13.3e-0545.76unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
Match NameE-valueIdentityDescription
Q8S8M03.1e-0858.46Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th... [more]
Q9FJW31.2e-0757.14Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th... [more]
Q8LCL84.2e-0545.57Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali... [more]
Match NameE-valueIdentityDescription
A0A314Y8T57.7e-2687.69CYSTM domain-containing protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN... [more]
B9SMJ51.3e-2592.19CYSTM domain-containing protein OS=Ricinus communis OX=3988 GN=RCOM_0230320 PE=3... [more]
A0A6J5XT781.7e-2586.15CYSTM domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS3935... [more]
A0A1U8A0R01.7e-2592.19uncharacterized protein LOC104595564 OS=Nelumbo nucifera OX=4432 GN=LOC104595564... [more]
A0A2P5FH351.7e-2592.19Cysteine-rich transmembrane CYSTM domain containing protein OS=Trema orientale O... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028144Cysteine-rich transmembrane CYSTM domainPFAMPF12734CYSTMcoord: 12..58
e-value: 1.4E-15
score: 57.2
IPR044850Cysteine-rich and transmembrane domain-containing protein WIH1/2-likePANTHERPTHR31568RCG49325, ISOFORM CRA_Acoord: 1..64
NoneNo IPR availablePANTHERPTHR31568:SF105CYSTEINE-RICH AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN A-LIKEcoord: 1..64

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000807Bhi05M000807mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane