Bhi05G000792 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G000792
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr5: 33626083 .. 33626272 (+)
RNA-Seq Expression	Bhi05G000792
Synteny	Bhi05G000792

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCCATTTCAAAGAGGAGCAGGAAGTCCATGAAAGCTACTTGGGACGAAAGCGATGAAAGCGAATCTGAAAGCGAGGAAGAAGTAGCAAATCTGTGCGTTATGGCTTTTAGAGATGACGACGACGACGATGATGAGGTAAGTCCTGAAAATCTTACTTTTGATGAGCTCATTGATGCATATAATGAA

mRNA sequence

AAAATCCATTTCAAAGAGGAGCAGGAAGTCCATGAAAGCTACTTGGGACGAAAGCGATGAAAGCGAATCTGAAAGCGAGGAAGAAGTAGCAAATCTGTGCGTTATGGCTTTTAGAGATGACGACGACGACGATGATGAGGTAAGTCCTGAAAATCTTACTTTTGATGAGCTCATTGATGCATATAATGAA

Coding sequence (CDS)

AAAATCCATTTCAAAGAGGAGCAGGAAGTCCATGAAAGCTACTTGGGACGAAAGCGATGAAAGCGAATCTGAAAGCGAGGAAGAAGTAGCAAATCTGTGCGTTATGGCTTTTAGAGATGACGACGACGACGATGATGAGGTAAGTCCTGAAAATCTTACTTTTGATGAGCTCATTGATGCATATAATGAA

Protein sequence

KSISKRSRKSMKATWDESDESESESEEEVANLCVMAFRDDDDDDDEVSPENLTFDELIDAYNE

Homology

[Close]

BLAST of Bhi05G000792 vs. ExPASy TrEMBL
Match: A0A6J1DS74 (uncharacterized protein LOC111023806 OS=Momordica charantia OX=3673 GN=LOC111023806 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.3e-06
Identity = 37/63 (58.73%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 1   KSISKRSRKSMKATWDESDESESESE-EEVANLCVMAFRD-DDDDDDEVSPENLTFDELI 60
           KS  K  +K+MKATWD+SDES SESE EEVAN C MA  D +D+ DDEV+ + L++DEL 
Sbjct: 118 KSSKKSKKKAMKATWDDSDESGSESENEEVANFCFMAHSDKEDEQDDEVNLDPLSYDELF 177

Query: 61  DAY 62
           +A+
Sbjct: 178 EAF 180

[Close]

BLAST of Bhi05G000792 vs. ExPASy TrEMBL
Match: A0A6J1DY46 (uncharacterized protein LOC111025259 OS=Momordica charantia OX=3673 GN=LOC111025259 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 8.7e-06
Identity = 35/63 (55.56%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 1   KSISKRSRKSMKATWDESDESESESE-EEVANLCVMAFRD-DDDDDDEVSPENLTFDELI 60
           KS  K  +K+MKATWD+SDES +ESE EEVAN C MA  D +D+ DDE++ + L++DEL 
Sbjct: 136 KSSKKSKKKAMKATWDDSDESGNESENEEVANFCFMAHSDKEDEKDDEITLDPLSYDELF 195

Query: 61  DAY 62
           +A+
Sbjct: 196 EAF 198

[Close]

BLAST of Bhi05G000792 vs. ExPASy TrEMBL
Match: A0A6J1CR79 (uncharacterized protein LOC111013509 OS=Momordica charantia OX=3673 GN=LOC111013509 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.6e-05
Identity = 32/46 (69.57%), Postives = 40/46 (86.96%), Query Frame = 0


Query: 1   KSISKRSRKSMKATWDESD-ESESESEEEVANLCVMAFRDDDDDDD 46
           KS S+R++K+MKATWDESD  S+SES EEVANLC MAF D+DDD++
Sbjct: 154 KSSSRRNKKAMKATWDESDGGSDSESGEEVANLCFMAFGDEDDDEE 199

[Close]

BLAST of Bhi05G000792 vs. ExPASy TrEMBL
Match: A0A6J1DNV3 (uncharacterized protein LOC111022917 isoform X6 OS=Momordica charantia OX=3673 GN=LOC111022917 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.2e-04
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 2  SISKRSRKSMKATWDESDE-SESESEEEVANLCVMAFRDDDDDD 45
          S S+R++K+MKATWDESDE S+SES EEVANLC MA  ++DD+D
Sbjct: 12 SSSRRNKKAMKATWDESDEGSDSESGEEVANLCFMALGNEDDND 55

[Close]

BLAST of Bhi05G000792 vs. ExPASy TrEMBL
Match: A0A6J1DRR3 (uncharacterized protein LOC111022917 isoform X5 OS=Momordica charantia OX=3673 GN=LOC111022917 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.2e-04
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 2  SISKRSRKSMKATWDESDE-SESESEEEVANLCVMAFRDDDDDD 45
          S S+R++K+MKATWDESDE S+SES EEVANLC MA  ++DD+D
Sbjct: 12 SSSRRNKKAMKATWDESDEGSDSESGEEVANLCFMALGNEDDND 55

The following BLAST results are available for this feature:

BLAST of Bhi05G000792 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05G000792 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05G000792 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DS74	2.3e-06	58.73	uncharacterized protein LOC111023806 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1DY46	8.7e-06	55.56	uncharacterized protein LOC111025259 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1CR79	5.6e-05	69.57	uncharacterized protein LOC111013509 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1DNV3	6.2e-04	68.18	uncharacterized protein LOC111022917 isoform X6 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1DRR3	6.2e-04	68.18	uncharacterized protein LOC111022917 isoform X5 OS=Momordica charantia OX=3673 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000792	Bhi05M000792	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding