Bhi05G000748 (gene) Wax gourd (B227) v1

Overview
NameBhi05G000748
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionGag-pol polyprotein
Locationchr5: 31836945 .. 31839131 (-)
RNA-Seq ExpressionBhi05G000748
SyntenyBhi05G000748
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCATATTAGACCATACTACTACAAGTTGTATGGTTATCGGAGATATGAGTAAAGTTCACGGTCTTCAGGGTATTCCAACAGTAGAAAATCTAATTCTCCTATTAGGAAGCAAATATGGAGAATTAAGAACAACCCAAATCGATGTAATGTTGTGCTCACATCTCTTCGATCCTCAACTAAAGGGGATTGATTCTTTGATAGTGGATGTTCTCGACATATGACAGGAGAATGGAGGTATGTTTTTAATATCAAGGCTTTTGGATCAAGAGAAGTTAATTTTGTTGATGGAGCCATAGGAAAAATTATTGGTAAATGGAAACTCAAATATCTAGGATTACAGTGCTTGAGATGTAATGCTGGTAAGGGACTAACAACAAATATGATTAGTATTAGCCAGCTGTATGACCATGGGCTGAATGTGAACTTTACAAAAGACGGGTATGTTGTCACAAATAACGCTAAATCACTTATCATGATAGGTAAGAGGTCTTTTGACAATTGCTATTTATGGATACCTACAGACTCTCAACCTCATAAGCATGATGAAACTATACCTTATAACATAAACGACTAAGTCACATTAGCATTAAAGCTATACAAAAGTTTGTGACGAAAATTGTTGTGATTGATCTTCCAAATATAAGTAGTCATGGTAGAATCATTTATGGAGAATATCAAGTTGGTAAATAGATAAGGGTGCCACACAGACAGATACCAGTAATAATTACAAATGTGTTCTTTAACTCACTCATGTAGACCTTATGGGCCTATGGAAGTTGAAAGTCTATGAGGGAAGAAGTATGTCATGGTTTGTGTTGATGACTTTTCAAGATACACTTGGGTCAAATTTATAAGGGAGAAATCATGGACCTTTCAAGTTCTCAAAGCTCTTCATCTTCAATTGCAAAGAGAAAAAGGGCTCAACATAGTTTGTATCCACATGGAGCACAGAAGGGAATTTAAAAATAGTCAATTTACTGATTTTTGCACTGCTGAAGGCATTCATCATGAGTTCTCTACTCTCCTTAATCCTTAACAAAATGGTATTGTTGAATGGAAAAATCGCTCACTTTAAGAGATGGCTCGTGCTATGCTCCACACCTATGATCTATCTTACCAGTTTTGGGTTGAAGCCCTGAGTAGATAGAACTTTTGAAAAAAGGGACGTCATACGGTGTTGATTTCATTATTTACTTTATTAAGTCATGCAAAGGTTTTATAGCAGTTTGTCTTAGTGAGATGTTTAAGTCTATAAACTAAATTTCGATTTATTATTTTTCAATAAACTTTTCTCATGCAAACTTAATGTGTGTTTGGAATACATTTTCAAGTGACTAATCTAAAAAAGAAGTCCTTTTAAAAAAAAAAATCCAAATGTTTGGAAACCGCTCAAAATAGATTTTGTAAAATTGAGTATATAAAATAAGTTGGTTTCAGATAAACACTTGAAACCAACTTTTAAAAAAATAAATTTTGAGTACAATGGTTACAACCTCCAGCCATAACCTTCAATAATCATTGCTGGCAAACTTCTGTGGCTCACCGTCGGCCCAAGCTATTTAATGAAACCAAAATAAGATGCATACAATTACGTAAATTCATAAATAACTTTCATTACTAACCTAACTATTTTCATGAGAGATTAACAATGATTCAGTATTATAAGTTTGATTAAACATACGATCTATCAAATTGAACATTTAACCTAACCTATATCAAGACCAACCAATATAAATATAAAAACAATACTAATAAAAACAACTATTGAAGTGATTTTTCGTCGTTGAAATCCGTCTATCCCACCTTGATTGCACTTTGAGATCTCGAATGGCCTTCAAACTATTTCCCTCACACTCTTAACTTTTTTTTGCAACAAAATTCATGTTAGGGCTTCAATTTTTTTTTTTGTCCTTGAAAGCTTTTGAAAACCCTATGTCTTATAGAGAAAGATTTCCTAAAATGAAGAATTTTTTAATTAAGGAAAGTTGGTGCTCTTCACCTAGCACCACACTGCTGCCTGCGAGGCTGCTGCACTCCTCTAAATGATTCTCTTTGTAACTGGCATCGCATGTAGTGCCTAGCATTGTCACAGTGCCCACCTCAGTTAGGCATCCTTGGTCTTTTTCATCACAATTTTGGAGATCTAGCTTGGTTTGACTCCATTGACTTTCAAATCTCGTTCTCCA

mRNA sequence

CTCATATTAGACCATACTACTACAAGTTGTATGGTTATCGGAGATATGAGTAAAGTTCACGGTCTTCAGGGTATTCCAACAGTAGAAAATCTAATTCTCCTATTAGGAAGCAAATATGGAGAATTAAGAACAACCCAAATCGATGTAATGTTGTGCTCACATCTCTTCGATCCTCAACTAAAGGGGATTGATTCTTTGATAGTGGATGTTCTCGACATATGACAGGAGAATGGAGGTATGTTTTTAATATCAAGGCTTTTGGATCAAGAGAAGTTAATTTTGTTGATGGAGCCATAGGAAAAATTATTGGTAAATGGAAACTCAAATATCTAGGATTACAGTGCTTGAGATGTAATGCTGGTAAGGGACTAACAACAAATATGATTAGTATTAGCCAGCTGTATGACCATGGGCTGAATGTGAACTTTACAAAAGACGGGTATGTTGTCACAAATAACGCTAAATCACTTATCATGATAGGTAAGAGGTCTTTTGACAATTGCTATTTATGGATACCTACAGACTCTCAACCTCATAAGCATGATGAAACTATACCTTATAACATAAACGACTAAGTCACATTAGCATTAAAGCTATACAAAAGTTTGTGACGAAAATTGTTGTGATTGATCTTCCAAATATAAGTAGTCATGGTAGAATCATTTATGGAGAATATCAAGTTGGTAAATAGATAAGGGTGCCACACAGACAGATACCAGTAATAATTACAAATGTGTTCTTTAACTCACTCATGTAGACCTTATGGGCCTATGGAAGTTGAAAGTCTATGAGGGAAGAAGTATGTCATGGTTTGTGTTGATGACTTTTCAAGATACACTTGGGTCAAATTTATAAGGGAGAAATCATGGACCTTTCAAGTTCTCAAAGCTCTTCATCTTCAATTGCAAAGAGAAAAAGGGCTCAACATAGTTTGTATCCACATGGAGCACAGAAGGGAATTTAAAAATAGTCAATTTACTGATTTTTGCACTGCTGAAGGCATTCATCATGAGTTCTCTACTCTCCTTAATCCTTAACAAAATGGTATTGTTGAATGGAAAAATCGCTCACTTTAAGAGATGGCTCGTGCTATGCTCCACACCTATGATCTATCTTACCAGTTTTGGGTTGAAGCCCTGAGTAGATAGAACTTTTGAAAAAAGGGACGTCATACGGTGTTGATTTCATTATTTACTTTATTAAGTCATGCAAAGGTTTTATAGCAGTTTGTCTTAGTGAGATGTTTAAGTCTATAAACTAAATTTCGATTTATTATTTTTCAATAAACTTTTCTCATGCAAACTTAATGTGTGTTTGGAATACATTTTCAAGTGACTAATCTAAAAAAGAAGTCCTTTTAAAAAAAAAAATCCAAATGTTTGGAAACCGCTCAAAATAGATTTTGTAAAATTGAGTATATAAAATAAGTTGGTTTCAGATAAACACTTGAAACCAACTTTTAAAAAAATAAATTTTGAGTACAATGGTTACAACCTCCAGCCATAACCTTCAATAATCATTGCTGGCAAACTTCTGTGGCTCACCGTCGGCCCAAGCTATTTAATGAAACCAAAATAAGATGCATACAATTACGTAAATTCATAAATAACTTTCATTACTAACCTAACTATTTTCATGAGAGATTAACAATGATTCAGTATTATAAGTTTGATTAAACATACGATCTATCAAATTGAACATTTAACCTAACCTATATCAAGACCAACCAATATAAATATAAAAACAATACTAATAAAAACAACTATTGAAGTGATTTTTCGTCGTTGAAATCCGTCTATCCCACCTTGATTGCACTTTGAGATCTCGAATGGCCTTCAAACTATTTCCCTCACACTCTTAACTTTTTTTTGCAACAAAATTCATGTTAGGGCTTCAATTTTTTTTTTTGTCCTTGAAAGCTTTTGAAAACCCTATGTCTTATAGAGAAAGATTTCCTAAAATGAAGAATTTTTTAATTAAGGAAAGTTGGTGCTCTTCACCTAGCACCACACTGCTGCCTGCGAGGCTGCTGCACTCCTCTAAATGATTCTCTTTGTAACTGGCATCGCATGTAGTGCCTAGCATTGTCACAGTGCCCACCTCAGTTAGGCATCCTTGGTCTTTTTCATCACAATTTTGGAGATCTAGCTTGGTTTGACTCCATTGACTTTCAAATCTCGTTCTCCA

Coding sequence (CDS)

ATGACAGGAGAATGGAGGTATGTTTTTAATATCAAGGCTTTTGGATCAAGAGAAGTTAATTTTGTTGATGGAGCCATAGGAAAAATTATTGGTAAATGGAAACTCAAATATCTAGGATTACAGTGCTTGAGATGTAATGCTGGTAAGGGACTAACAACAAATATGATTAGTATTAGCCAGCTGTATGACCATGGGCTGAATGTGAACTTTACAAAAGACGGGTATGTTGTCACAAATAACGCTAAATCACTTATCATGATAGGTAAGAGGTCTTTTGACAATTGCTATTTATGGATACCTACAGACTCTCAACCTCATAAGCATGATGAAACTATACCTTATAACATAAACGACTAA

Protein sequence

MTGEWRYVFNIKAFGSREVNFVDGAIGKIIGKWKLKYLGLQCLRCNAGKGLTTNMISISQLYDHGLNVNFTKDGYVVTNNAKSLIMIGKRSFDNCYLWIPTDSQPHKHDETIPYNIND
Homology
[Close]
BLAST of Bhi05G000748 vs. ExPASy TrEMBL
Match: Q84VI4 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17
Identity = 52/104 (50.00%), Postives = 65/104 (62.50%), Query Frame = 0 

Query: 1   MTGEWRYVFNIKAFGSREVNFVDGAIGKIIGKWKLKYLGLQCL-RCNAGKGLTTNMISIS 60
           MTG   ++ NI+   +  V F DG+ GKIIG  KL + GL  L +    KGLT N+ISIS
Sbjct: 570 MTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISIS 629

Query: 61  QLYDHGLNVNFTKDGYVVTNNAKSLIMIGKRSFDNCYLWIPTDS 104
           QL D G NVNFTK   +VTN    ++M G RS DNCYLW P ++
Sbjct: 630 QLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQET 673

[Close]
BLAST of Bhi05G000748 vs. ExPASy TrEMBL
Match: Q84VH6 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17
Identity = 55/119 (46.22%), Postives = 69/119 (57.98%), Query Frame = 0 

Query: 1   MTGEWRYVFNIKAFGSREVNFVDGAIGKIIGKWKLKYLGLQCL-RCNAGKGLTTNMISIS 60
           MTG   ++ NI+   +  V F DG+ GKI G  KL + GL  L +    KGLT N+ISIS
Sbjct: 573 MTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHEGLPSLNKVLLVKGLTVNLISIS 632

Query: 61  QLYDHGLNVNFTKDGYVVTNNAKSLIMIGKRSFDNCYLWIPTDSQPHKHDETIPYNIND 119
           QL D G NVNFTK   +VTN    ++M G RS DNCYLW P +S    H  T  ++  D
Sbjct: 633 QLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQES---SHSSTCLFSKED 688

[Close]
BLAST of Bhi05G000748 vs. ExPASy TrEMBL
Match: Q84VH8 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17
Identity = 52/104 (50.00%), Postives = 65/104 (62.50%), Query Frame = 0 

Query: 1   MTGEWRYVFNIKAFGSREVNFVDGAIGKIIGKWKLKYLGLQCL-RCNAGKGLTTNMISIS 60
           MTG   ++ NI+   +  V F DG+ GKIIG  KL + GL  L +    KGLT N+ISIS
Sbjct: 572 MTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISIS 631

Query: 61  QLYDHGLNVNFTKDGYVVTNNAKSLIMIGKRSFDNCYLWIPTDS 104
           QL D G NVNFTK   +VTN    ++M G RS DNCYLW P ++
Sbjct: 632 QLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQET 675

[Close]
BLAST of Bhi05G000748 vs. ExPASy TrEMBL
Match: Q84VI2 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.4e-17
Identity = 52/104 (50.00%), Postives = 65/104 (62.50%), Query Frame = 0 

Query: 1   MTGEWRYVFNIKAFGSREVNFVDGAIGKIIGKWKLKYLGLQCL-RCNAGKGLTTNMISIS 60
           MTG   ++ NI+   +  V F DG+ GKIIG  KL + GL  L +    KGLT N+ISIS
Sbjct: 572 MTGVKEFLLNIEPCSTSYVTFGDGSKGKIIGMGKLVHDGLPSLNKVLLVKGLTANLISIS 631

Query: 61  QLYDHGLNVNFTKDGYVVTNNAKSLIMIGKRSFDNCYLWIPTDS 104
           QL D G NVNFTK   +VTN    ++M G RS DNCYLW P ++
Sbjct: 632 QLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQET 675

[Close]
BLAST of Bhi05G000748 vs. ExPASy TrEMBL
Match: O65147 (Gag-pol polyprotein OS=Glycine max OX=3847 GN=pol PE=4 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 1.2e-16
Identity = 51/104 (49.04%), Postives = 64/104 (61.54%), Query Frame = 0 

Query: 1   MTGEWRYVFNIKAFGSREVNFVDGAIGKIIGKWKLKYLGLQCL-RCNAGKGLTTNMISIS 60
           MTG   ++ NI+   +  V F DG+ GKI G  KL + GL  L +    KGLT N+ISIS
Sbjct: 546 MTGVKEFLVNIEPCSTSYVTFGDGSKGKITGMGKLVHDGLPSLNKVLLVKGLTANLISIS 605

Query: 61  QLYDHGLNVNFTKDGYVVTNNAKSLIMIGKRSFDNCYLWIPTDS 104
           QL D G NVNFTK   +VTN    ++M G RS DNCYLW P ++
Sbjct: 606 QLCDEGFNVNFTKSECLVTNEKSEVLMKGSRSKDNCYLWTPQET 649

The following BLAST results are available for this feature:
BLAST of Bhi05G000748 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi05G000748 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi05G000748 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Q84VI42.4e-1750.00Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1[more]
Q84VH62.4e-1746.22Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1[more]
Q84VH82.4e-1750.00Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1[more]
Q84VI22.4e-1750.00Gag-pol polyprotein OS=Glycine max OX=3847 GN=gag-pol PE=4 SV=1[more]
O651471.2e-1649.04Gag-pol polyprotein OS=Glycine max OX=3847 GN=pol PE=4 SV=2[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000748Bhi05M000748mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding