Bhi05G000711 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G000711
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr5: 29926310 .. 29926552 (-)
RNA-Seq Expression	Bhi05G000711
Synteny	Bhi05G000711

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGCAGCCTGTTGTAAGCCGGAAGTGACTAGGGAGAAGAAGGAGAAGCGTCGGGATTCTAGTTGCCCCTCATCCCATGACGAAATGCGGAGATCATTTTTTTGTCGGACGAAATCGATTCGACCAGTTGCTCGGCAGCTTTTCCTTTCTTCTTATCCTTGGGGTCCGCTGGAGCTTCTTTCGCCTTCGTCTTTGGTTCGGTATTGCAAAGAAAAGCAAAGTTCAGGCAAGAAAAAATGA

mRNA sequence

ATGAAAGCAGCCTGTTGTAAGCCGGAAGTGACTAGGGAGAAGAAGGAGAAGCGTCGGGATTCTAGTTGCCCCTCATCCCATGACGAAATGCGGAGATCATTTTTTTGTCGGACGAAATCGATTCGACCAGTTGCTCGGCAGCTTTTCCTTTCTTCTTATCCTTGGGGTCCGCTGGAGCTTCTTTCGCCTTCGTCTTTGGTTCGGTATTGCAAAGAAAAGCAAAGTTCAGGCAAGAAAAAATGA

Coding sequence (CDS)

ATGAAAGCAGCCTGTTGTAAGCCGGAAGTGACTAGGGAGAAGAAGGAGAAGCGTCGGGATTCTAGTTGCCCCTCATCCCATGACGAAATGCGGAGATCATTTTTTTGTCGGACGAAATCGATTCGACCAGTTGCTCGGCAGCTTTTCCTTTCTTCTTATCCTTGGGGTCCGCTGGAGCTTCTTTCGCCTTCGTCTTTGGTTCGGTATTGCAAAGAAAAGCAAAGTTCAGGCAAGAAAAAATGA

Protein sequence

MKAACCKPEVTREKKEKRRDSSCPSSHDEMRRSFFCRTKSIRPVARQLFLSSYPWGPLELLSPSSLVRYCKEKQSSGKKK

Homology

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BLAST of Bhi05G000711 vs. ExPASy TrEMBL
Match: A0A7J6DV88 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_002358 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.4e-22
Identity = 57/69 (82.61%), Postives = 60/69 (86.96%), Query Frame = 0


Query: 12  REKKEKRRDSSCPSSHDEMRRSFFCRTKSIRPVARQLFLSSYPWGPLELLSPSSLVRYCK 71
           RE+KE+RRDSSCPSSHDE+RRSF CRTKSIRPVAR LFLS Y W PLEL SPSS V YCK
Sbjct: 36  REEKEERRDSSCPSSHDEVRRSFLCRTKSIRPVARLLFLSPYSWDPLELPSPSSSVLYCK 95

Query: 72  EKQSSGKKK 81
           EKQS GKKK
Sbjct: 96  EKQSYGKKK 104

The following BLAST results are available for this feature:

BLAST of Bhi05G000711 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05G000711 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05G000711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6DV88	8.4e-22	82.61	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_002358 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000711	Bhi05M000711	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005739	mitochondrion