Bhi05G000612 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G000612
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Glycosyltransferase
Location	chr5: 24971737 .. 24972033 (+)
RNA-Seq Expression	Bhi05G000612
Synteny	Bhi05G000612

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCATTCAAGACAGTAGGACCAACAGTTCCATCATACTCATAGACAAAAGGTTGAAGATGACCACAATTACGGAATGGATCTAATAAAATCAAGTGAAGAAGAAAAAAATAATAAAGTGGTGTTGGACTCTAAAAATAACAACTCCGTGGTTTACGTGTCATTCGGAAGCGTATCGAAGTTGGCAGATGATCAAATGGAAGAACTTGCATGGGCCTCAAAGCAGCCAACGTAACATTCCTTTGGTCATTAAAGAGCCTGAAGCCCAAAATATGCTTCCAAAAGCCTTTTTGAAGAG

mRNA sequence

TACCATTCAAGACAGTAGGACCAACAGTTCCATCATACTCATAGACAAAAGGTTGAAGATGACCACAATTACGGAATGGATCTAATAAAATCAAGTGAAGAAGAAAAAAATAATAAAGTGGTGTTGGACTCTAAAAATAACAACTCCGTGGTTTACGTGTCATTCGGAAGCGTATCGAAGTTGGCAGATGATCAAATGGAAGAACTTGCATGGGCCTCAAAGCAGCCAACGTAACATTCCTTTGGTCATTAAAGAGCCTGAAGCCCAAAATATGCTTCCAAAAGCCTTTTTGAAGAG

Coding sequence (CDS)

ATGGATCTAATAAAATCAAGTGAAGAAGAAAAAAATAATAAAGTGGTGTTGGACTCTAAAAATAACAACTCCGTGGTTTACGTGTCATTCGGAAGCGTATCGAAGTTGGCAGATGATCAAATGGAAGAACTTGCATGGGCCTCAAAGCAGCCAACGTAA

Protein sequence

MDLIKSSEEEKNNKVVLDSKNNNSVVYVSFGSVSKLADDQMEELAWASKQPT

Homology

[Close]

BLAST of Bhi05G000612 vs. ExPASy TrEMBL
Match: A0A6J1GMP0 (Glycosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111455839 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 6.1e-05
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 0


Query: 1   MDLIKSSEEEKNNKVVLDSKNNNSVVYVSFGSVSKLADDQMEELAWASK 50
           M+LIKS+E++      LDSK++ SV+YVSFGSVS+L ++QM+E+AW  K
Sbjct: 252 MNLIKSTEDDSKTIEWLDSKDSESVIYVSFGSVSELGEEQMKEIAWGLK 300

The following BLAST results are available for this feature:

BLAST of Bhi05G000612 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05G000612 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi05G000612 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMP0	6.1e-05	55.10	Glycosyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111455839 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.2000	Glycogen Phosphorylase B;	coord: 13..47 e-value: 1.8E-10 score: 42.7
None	No IPR available	SUPERFAMILY	53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 10..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000612	Bhi05M000612	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008194	UDP-glycosyltransferase activity