Bhi05G000519 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G000519
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	general transcription factor 3C polypeptide 5-like
Location	chr5: 20701220 .. 20719257 (-)
RNA-Seq Expression	Bhi05G000519
Synteny	Bhi05G000519

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAGCTGAAAGACAACAGTATCTCAGGGCACTTACCTACTGCCCAGAATTTTGCAGTTCACTATCCTGGTTATCCTTTGTCCAAGCGTCGGGCAATTGAAAGTCTAGGAGGAACACAATCAATTCTCAAGGTATAACTAATAGTCGATATCAAATAATTGGATATCATTTTGAAATTCTCACAGTTCCTCTTTTCGATTTTGAAGTTTCCCTGTTAATATAAAACCTGTTAATATTTTGTCTTTAGTCTACTTGTGCATAAGTCTCATCGTTAATAAACCAATGCTTCCTTGTGGAACCAAAGAAGGGTGCAGCATTGTATATACACATTATTTGGGAGTTGATGTTGATCAAATTAAGGAACTTTTTTTTTAGGGTCTAGGGTTTTAAAAAAATTATTGCTTCTCTTCTGTAGGTTTAGGATGTAATATAATTTGAATGGAGAAATTCCATTTCTTCTCATGATCAGATAAATTCCATTAAACAATTTATCAGGCCTTTTTTTGTGAAAACATATTCTAGAAAGGGTATAAAGGAAAATTCCCCTCCAGCTAGTTGATTGGTGGGATGTATTATTTACCGTGGAGAGGGTCATTGTATTTGCGGGGAAGGAGAGGAATGTTTGAGATCATTGTGAACGTTAGTAGAGGAGATGATACTGAGGATAGGTTACCAACTATCTAAAACTAAATTGATTTATTGGTTTGTGATTTTGCTAGTAGTGGTTCTCACTTGGTTAGTTGGGAGGTTGCGACTAATCTAGTGGAGCTTGGGGTTTGGGTATAAGGAGTTTTAGGATGTGAACAAGGCCTTGTTGGCTAAGTAGTTGTGGTGCTTTCCTCGTGAGTCTGATAATTTATGGAATAAGGTTGTTGTGAGTAATTATCGCTGATAGCTCTCTTTGCGCTTTGTTTCTTTCTCTACCATTTACCCAATTCAAAATTCTCATTTGTGGCTTACATCCTCTTTTAAAAAATGTTCCTCTATTTTCCTTGATCTCAATCATCCTCGTTCTAACAGGGAGGCTAATGACATTTCCATGCTTGATTTAATTGGCAATTTTACTATCTCAGAGTGAAGTGAATGGCGGGTTTAGAGTCCTAGCCCTTTGAACGGGTTCTCCTATAAGTTGTTATTTGGATGCTAGGTGAGCCCTCTTCTTCTCGAAGTTCTCCCTTCTTTTCTTAGTTTTGGAAGATTAAAATTGCAACAAAGGTCAATAACGAAAGACGTGCTCCATTTTATACTTCATGTATCAACGAAAAGGTCAATCTTGGATAATAACTAAATTCTTTTTCGTGGTGCTCATTATCAAAGAAGTTTGTGAGTGTTATAAGATATATTTAAATTAATATATACAGATGTCCTTTATTGTAATTTTGTATATCTTAGATTAGGGTTTCTCATTCTCCAATATATATGTACCTTTTATCTAATTAAATGATAAGAAATTTATTCTCCAACAGTATATAGTATATGGTATAAGAGCCATTCTTTGTTTAGGGTTTAGAATATTCTTTGACAGCTTTGTGAGTTAGGGTTTGAATTTAGATCATCATTTCAAGTGGCTGTTTGACGACATCGCCCACCTTAGGAGGACCGCCACCGCTGTTGCCTCAATCTGCCATCGCCGTTCACCGGAAATAGCTGCATGTGAGTCACATGCGCTGCCAGTTCAGAGTTGCTCCGTCGCCACGTGCCGGCGCGTGGGAGCACGTGAAGTTGCCTTCTTCGCTTCCGTCGATTGGGTTCGTCTTGGGTTAGCTTTTTCGGTCCATCTGTGCCTTTAGTTCTACCAACATCTACTCGAGTGTGAGGCTGTTTGAAAATACCCTTTTGTTCCTAGGGTTTGTGACTGTTTTGCTCTCATTTGGGACTGTTTCTATGAAACCCGGGTCTCCTTACTTAAGCAGGTAATTAAGGAAATTAACCAAGTATAAGTTAAATCTTATGTTGAAGGGAAGAAAATTCTAAGTATTGGAATAAACTTTTGAGTAGCTTTGAGTTGAGCCTTAACTAGTAAAAATTTGGCTAAGTATGAAACCAAAAAGAAACCATGCGTTTGGTGTTAGGAAGCATTAACGCATAAGGCTCTAATGAAGCCAGGTTTGTAGAGGTTATAAGGGATTAAGTATTGAAGCCTAGGACAGCCATGCATTGAGCTTGAGAGGTATGGATGCATGTTGGCCGAAACATTGGCATGAGGCATTGCACGAGCGTGGCATGACAAGGGCTGCTCATGCGTTGGGATGGCAAGAGGTTGCATGAGCAAGCGACAAGGAAGAGCCATTGAGTGACGAGGATGGGCCAGGCGTGAGCAAGGATGCATTCGGTTGTGCGCGAGCGTGGGCGCTAGGCGATGGAGCGTGCGCACGGACGATTGCATAGATGCTTGCGGGGTTGCACGATGAGCTAGACGATGGGCGAGAGCAAGAGCGAGAGGGCAGTGAGTGATGAGCTATGTGATAGGCGCAACAACTACACGATGAAGCTATACGATGGGCGAAGCCACAATGGGTGCATAGTGTAGTGTAAGCGTTCATGGGGCTTGTGGCACACAAGGCTTGCGAGGTTAGATGGTGAATGCATTGGTCTTGTGCACGAGGCTATGGGCGTTGGCAAGCAACAAGGGCATGCTTGCGTTAGTCATAAGGTATGCATTAGCAAGAGACTAGGCGATGGTAAGACAAACCATGAAGTGTTGACTCGAGACCCAGCTTGACCCAAGGGTTGGTATGCGATGGTGATGTGTTATGCACCAAGGACATCCGAGGGCATGTGGGCACATATGACAAAGGCTAGCAGCATGCGATGAAAGATTGTGATGGTCATAGTCCTAGTTGAACGCATGCGCCAAGGGTAAGCCATGCGAGAAGAGGAGGATGTGGCCCAGCAAATGACTTGCGATGCCTTGAGGTTAGTATGGCACAAGTGATGCGATGAAGCAAGCATGCGGCCATGTAATTGGAAGGGCATGCGATGATGAGAGAGCTATGGGCTGATAGATTCATTCGAACAAGTGGCTAACCGAGAAGAGGTTGAGCTTAAGTTAGTAGGAGGTGGACAAATAGGATTTCATGCAAAGAAGACTTATGCATGAGGAAGACAACTCAAACTTCATTCAAGTAGGAAGTGACATGGAAGTAGGTGAGTGACATGGAAGTAGGTGGTGGCGAAGCATGGTGCAGACACTCCAAAAGTTTCTAAGTAGGAGGTGTCATGCGTTGGAAGCCTTAAAAGATGACGAGGATCGGTTCTAAGGCCTATAAATACCACCACAAGGCTTCTCTTCAGTTCATAACCCAAATTCTCTTCAAAGGATATTAGGAAGAGTGTTTGAGGGCAGATTTGGAAGAAGCTTTGTGTTAATCATGAAGAGCATGCGTTGATAGCAAAACCATGCGTTGATCAAGTGATTCCAAGATGTGGAGATGCTATCGGATAGTGAGGTCATGAAGTAGCATCAACTTGGAACGAGTAGTTCTCCTAAACTACTTGTGCGTTTTAAGTGATTCCAAAGCCACTTGAAAGCTCTGAGTATCTAGTTTTCAAGACAGGGTTGTCGGAGAAGAAGCTCAAAGGAATCAAGCTAGAGAGTAAAGAAAAGATAGAAGGATCGAGCTCTCGGGTAAGCTTGGGCCAGTCTTGATGATTTGAGGATTCCAGCCAAACCACAAGGAGTCCTGAGCTGGGATTTTAAGATAAGTAAGTTAAGACATTTTTAAACCTATTTGTAGAAGGAAGTGTCTCAAAATAAGGTCTGAAAATATGAGTAATCTAAGCTTGAAGTTGAATTTGGAATTTAGGGTTCAAAAGAGAGCCTGAGGAAACCAAGGAACTTCTAGCGAGAAAGGTTCCTACCAACCAAGGTGAGTGGCATTTCTTTAAGGTCTTAAGCATCTTTTTTAGAATATATGTTATGTTTATGTTGTAATGAGTAGTTAGAACGAGAATGTGAATATGTGACTGGGATGGTCAGGAGGTCAATAGACCTAGTTCCTGATCTCGGAGCAGAATCTCACGGGATGGTTAGGGGGCCATAACGCCTAGTTCCTGAACCTGTGAGAGGAACCTCATATAGGATGGTCAGAGGGTCGACAAGCCTAGCTTCTGAGCCCATAAGCGGGGATCTATGTGCACATAGGGAACACATGAGAGTATACGTTTATGATTAGTATCCGTTTAACTATCTATCGTGTGTAAGTAGAGTTGAGAACAGACTCATTTGAGATGGAGGTTTGGATGTTAACCTCGTAATTGTGATATGCTTGTATTATTATGAGTTGAAAGAGACTTTAGAAGTTGCTTACCACTCATTGAGCTTCTTGAAGCTCATTCTTTTCTTTCATGTTTTTCTTCCCAGGTAGCAAAAGATAAGGGGTTTCAGGGTGCTGCTAAGGTCAAGGTCTGCCACGCCACAGCCACACTTTCGGTTTTAGAGTTGTTGATGTAAACTTTGTAGTTAAGTTTGGAAGTTGTATAAACGTTATACTGTTTGTAATAAAATGAGTTTAGTCAAACAGTTGTTATCCTTGACTTAAAGAGTAATGAGTGAAAAAGGTTCAGATGGGCAGTAGGTATCACAATAGGGTGCTATCTACCGTCCTCACGCCTCCTTTCGAGTTCTAGAGGTGAGCTAGGGAGGGGGTGTGACAGTTTCACTCTTTGATTTACCTTGCTTTCGATTTTTGATTTCTTTAATTCTGCTTGTGGGATCGTGTGTTCGTTCTTCATGGATGAGATGAAGCATATGGTTGTATCCAATGTAATTTCCTTAGCATCAAAGATAACAGAACATAAGTTACATGGAACTAATTACTATGATTGGCTTCGTACTATTCAGTTTTATTTACTTAGTATTGATATGGATGATCATGCGACTTAGAATCCACCACAAGATGATAAGAAAAAGGCTTGGCTTCGTGACGACGCTTGACTTTATCTTCAGATTAAGAATTCCATTGAGAGTGAGGTTGTTGGTTTGGTAGATCATTGTAATTCTGTTAAGGAACTCTTAGATTTTTTAGAACTTTTATACTCGGGAAAAGAACACGTCCATCGAATGTTTGAAATTTGTATGCAATTCTTTCGAGCCAAACAGAAAGGAGAATCTGTTACAAGCTATTTTATGAGGCTTAAAAAGACAGTTGCCGAACTTGCCTTATTGTTACCTTTTAGCCCAGATGTCAAAGTTCAACAAGTTCAACGAGAAAAGATGGCTGTTATGATATTTCTAAATGGACTTTCACTTGAATTTGGAATGGCTAAAACACAGATTCTTTCTGACTTTGAGATTCCATCATTAGGAGGCCTTTAGTCGTGTGCTTCGTATTGAGAGCTCTCAATCTGGTTAGTTTGTTTCTCATCCTAGTAGTGCTCTTATAAGCAAGAATAATAATTCTCGGGTTACTCCAGGGATGACCAACAATTTTCAGAAGCCTAGTTATGATAATAAAAAATCTGATTCGCAGGAGATTGCTTGTCACTATTGTTGTAAGCCAGGACATTTGAAACATGATTGTCAAAAATTGTTGTATAAGGCTCAACGATCTCAACATGCTCAGATTGCTTCCGCCAATGATATGGCCGAAAAGTTTGTTACCATCTCTACTGACGATTTTGCTAAATTTCAAATATTTTAGGAATCCTTGCAGGCATCTTCTTTATCGAACCCTACTGCCACCATTATTGAGACAAGTAATTCGAAATGCCTTCTTACATCATCTACCAAGTGGGTCATAGACTCAGATGCCACCGCTCATATTGAAACCGTCCTTTCGAGTAGTATTACTGCTGTATTTTTTGCAGCTTTTGTTGTTGTTGGAACTACGTGGTATGGTTCAGCAACTACCCTGATTGAATTATTTGGGCCCACTCGTTATCAATGGGTAATTCTAACTTATTTTCTACACCTTGTCCCCTGCCCCATCCCCATCTGTCATTTTGGCAGATGGATCCATCTCCTCTGTTCTTGGATCCGACACCATTCCTCTCACACCATCTCTTTCTTTGTCCTTTGTATTACATTTGCCTTAGTTGTTTTTTAATTTAATTTCTATTAGCTAGCTTACTCGCGACCTTAATTGTTGTATCTTGTTTTTTTCCTGGTTATTGCTTGTTTTAGGATCGTATGACGAAGAAGATTATTGGTAGAGGACATGAGTCGGGGGGCCTTTACATTTTTTAGCACCAGATACCAAAAGTAGTAGCCTGCTCTGGCGTTACATCCCCGTTTGCAATTCACTATCGTCTGGGTCATCCTTCTTTGTTCATGTTGAAGAAAATATATCTTGAATTTCGTTCTTTGTCGTCTTTGAATTGTGACACGATGTCAATTTGCTAAATTTCATCGTCTTAGCTCTGGTCCTAGAGTCTATGAACGAGCCAACGCTCCATTTGAGTTAGTTCATTTTGATATTCGGGGTCTTTGTCCAGTTGTGTCTCAAACAGGTTTTCGTTACTTTGTTACTTTTGTTGACGATTATTTTTGTGTGACTTGGTTATATTTAATGAAAAATTATTCCGAGGTCTCATTTTTGTACTTTTCATGTTGAAATTCGAAATCAATTTAATGTCTCTATCAAAACCTTGCGCGTTGATAATGCTGATGAATATTTCTCGCATATTCTTGGATCTTACTTATGTGATCATGGCATCATTCATCAATCCTCTTGCATAGACACTCCATCTCAAAATGAAGTTGTTGAAAGAAAGAACAGACACCTCCTTGAGACAGCTCACGCCTTATCCTTTCAAATGCATGGTCCAAAGCAATTTTGGGTTGATGCGGTGTCCAATGCTTACTTCCTAATAATAGAATGCCTTCCTCTGTCCTCGATGGAGAGATTCCTCATCCTACTCTTTTCCCTACAAAATCTTTGTTTCCTATTGTCCCTAAGATCTTTGGCTGTGTTTGTTTTGCTCAGGATATTCGTCCACATCGTACCAAATTAGATCTAAAATCTTTGAAATGCATTTTCTTAGACTATTTGCGTGTTCAAAAGGGTTATTGTTGCTATTGTCCTACTCTTAACAAGTATTTTGTCTCTCCCAATGTTACGTTTCTTGAAGATATACCTTTTAGTCCCTCACCATCCAGTCATTGTAAAGGAGAGGAGGAGGACAATTTGTTTATCTATGAGATTATCTCTTCAACATCCTCTCTTACTCAACCTTCTTCTGTGTCTCTTCTTTCTCGCCCACTGGTCACTCGAGTTTACTCCAGACGTCCTCCATAACCACCTTTAGACACATGTCCTACACTGATGGCTTCTTTGACTTTTGATCCGGAATCGAGTGATGATCTATCCATTGCCCCTCGAAAAGGTAATCACACTTGTACTTACCATATTTCTTCATTTGTTTCGTATAACCAGTTGTCTTCAGCCACTTATTCCTTCATTACATCTCTTGATTCCATCTCTATTCCTCACTTGGTTCATGAAACTTTATCTCATTCTGGGTGGCGTAGTGCAATGATTGAGGAGATGACTGCATTGGATGAGAATGGTACTTGGGATTTAGTCTTGCGTCCGGCAGGAGAGAAGGCTATTGGATGTAAATGGGTATTTCTTTAGCCAATCTTGACGGAACAATGGTTTGCGTGAAAGCTCGTCTTGTTGCCAAAGGTATGCCCAAATCTATGGGACTGATTATTTTGATACATTTTCTCCTATTGCTAAATTAATTTCCATTCGACTATTTCTATCCGTGGCTGCTACTCATAATTGGCCTTTGCATCAACTCAACATTAAGAATGCTTTTCTGCATGGTGATCTTTAGGAGGAAGTTTACATGGAGCAACCACCTGGGTTTGTTGCTCAGGGGGAGAGTGATAAGTTGTGTCGTATTCGAAAATCTTTATATGGACTGAAACAAAGTCCATGCATGATTTGGTAAGTTTAGTCAAGCACTCGAATGTTTTGGTATTTAGAAAAGTGCTTTTGATCATTATGTATTCTATCAACGACCTGATAATGATATTATTTTGCTTGTTGTGTATGTTGACGATATCGTTATCACTGGAAATGGTATATTAGGTATATCTTCTCTCAAGACTTTTCTTCAGGGTCAATTTCATACTAAAGATTTGGGACAATTGAAGTATTTCTTGGGTATTGAAGTAATGAAAAGTAAGAAAGGTATTCATCTGTCACAATGGAAGTATGTACTTGATTTGTTCTCTGAGACTGGAAAATTAGGAGTCAAACCATGTAGTATCCGATGATACCAAATTTGCAACTTTCTTGAGAAGGAGAATTATTTAAAGATCCTGAGAGATATAGAAGATTAGTTGGAAAGTTGAACTATTTAACAGTGACACGACCATATATTGCTTACTCCATGAATATTGTGAGTCAGTTTGTCTTCTCCTACAGTGGATCATTGGGCTGCAGTAGAACAAATTCTATATTATCTAAAAGCTGCACATGGACATGGAATCTTATATAAAGATCATGGTCATACAAGGGTTGAATGTTTTTCAGATGCTGATTGGGCTGGATCTCGAGAGAATAGGTAATCAACCTCTGGATATTGTGTTTTTGTAGGAGGAAACCTAGTGTTATGGAAAAGTAAGAAACAAAATGTAGTTTCTCGTTCGAGTGCCGAGTCAGAATAGAGCTATGACACAATTCGTGTGTGAAATAGTGTGGATACATCAACTTTTATCTAAGATGAGTTTCCGCGTTACCATGCCAGCTAGATTATGGCGTGATAATCAAGCTGCACTTCACACTGCATCCAGTCCAGTATTTTATGAATGAACTAAACATTTTGAAGTGGATTGTCACTTTGTTCGCGAGAAAATACAAGAAGGGTTAATATCTACAGGATATGTGAAGACTAGAGAACAATTGGGAGATATATTTACCAAAGCTGTAAATGGAGCAAGAATAAGCTATTTATGCAACAAGCTGGACATGATTGACATATTTGCTCCAGCTTGAGGGGGAGTGTTATAAGATATATTTAAATTAATATGTACAATTATCCTTTATTGTAATTTTATATATCCTAGATTAGGGTTTCTCATTCTCCTATATATATGTACTTTTTATCTAATTAAATGATAAGAAATTCATTCTAACAGAATCTAGAACTCTTTTATTTTCCCTATTTACTTGGTCTGGGTTGCTTCTATTCTTTTGTCCTTCCTATTTCTTTTTTTTATGTTCTCAGTTAGTGTTGTATTTTGTTTTGTATTGTTAACTTTTGCCACTTTAGGAGTTTTGTATCCTTAAACATTAATCTCTTTTCATTTTCTTAATGGAAATCGTTATATCTTGTTAAAAATAAAAAACTATATTCCTTTTGGAGACGATCAATTTTGCCTTTGGTAAATGGGCTTGCCTGTATTATTTCTTAAAACATGAATTTTATATATTATTTTATACATCATCTCGTGAACTTAAATGGTTCACAAACCAAATCTCTTATATATTAATTTTTATATTTTCATTATTTCCTTAATTTATTGTTACAATGTATTTCGTTATTTCTTCATGTTTTGATAATTCAGCTTTCTCCTTTAACTGTGGTGTTCTAGGTTCGTGATATCCAATCAAGTAAGTTAGAGCTTCGCTTTAGACCGGAAGATCCATATTCACATCCGACATATGGGGAGCTTCGCCCATGCAGTTGTTTTCTTTTGAAAATATGTGCGTATTTATAAATTCGTTTTCAATATTTGAAGCATATGGAATTACTAACTCAAGAATTGATATGATGAAAGGCCATTCAAAAAGTGATACTATCGAGGGAATCATGAAAGTTGAAAAAGAAGTACCTAGAGAAGATGAAGCCAACCTTGATTTTGAGATGGTTGCTCGTGTGCCTGAAGCATATCATTTTGAGGGTTTGATGGATATTTATTCTCTTGGACTAAGTTTTCTGATTTATGTTATTCATATTTGAATGCCTATGAGTTCTCTTTTCTAAACTTTATTTCAACATATTTTAAGGCATGATTGACTACCAACACGTCATTGCTGTTCATGCGGATGCTACCCGGAGGAAGAAGGGGAATTGGGCAGAAATGCACGAACCATGTTTAGGTGTTATTTTTGTGTTTAATGTCTATATTATTATACATATAAGAGTTACATATGATTGCTAGAGTTGTGTCTTAAATTTATTAAATGAGTAAAGTAAACTCTACATGTGGTTTATGCAGGGAAGGGTAATGCCGTTGATGTGGACAAGGAGGATACTATGATTTTAGTTCCTCCATTATTTTCGATTAAGGATGTGCCTGAAAATTTAGTGTAAGAATTTTTTGCATCTATCATTTGGTTATATTGGGTGCTTATATTAGTTTGTTCGTAACACTTTCAACCTCTCATATTTCTGTTATTATAGGCTGCTTTTTTTTTTTTTTTTTTTTTTTCCCTGAAACGTTAACTAAACTGAAAAAACACCCAAATATAGGGGTGTGCTATTTTGTGGGTGGTGTGAGGTGAGTGGAACAATAGAGTTTTTAGAGGTGTGGAATAGGACCCTTGTGAGATTTGGTCCCTAATGCGTTATCATGTCTCTCTATGGGCTTTGAATTTGAAGGCTTTTTGTAACTATTCTATAGGAGTTATTTTGCATAGTCGGAGTCCCTTTTTATGGTGGGTTTTCCTCCTTTTTGTGGGTTTCTTTTGTTGCTTTGTATTCTTTCATTTTTTTTTTCAATGAAAGTAGTTCTTTTTTATAAAAAAGAAAAGGAAAAAAAGGAAAAAAAAACCTAATAACCAACCATAGCTAATATACTAATCAATCAGGACTAACAGCCTAACTGGTAACTAACTATTCTAGGGTTTAGCTTGCAGTTTCCTCTCACCAAAAAATAACTTTTACTCGTGTTAAAAAATGATGAAGTTGGGAATAGGCGGGTGAACTGCAAAATTGATTCGTCCTTCTTCCTATGATTTTAAATACTCCAATTGAAAACGTAGTTTTGAGCTTGTAAGAATACCAATAAAATATCCAAGAAGCATTAAATTTCAGTGGCAAAGATTTATTCATCCGCTGGAAACCTGACTTTGCTGTGTGAGACCAATTCACTTGAGTGATTAACTCTCCTTACCTTGGGATGCTTTTCAAAATTACTAATTGGACTAATCAATCTATTATTTTTTCTGAAATGGAAACAGTACTTTTCATTCATGTAATAAAAAGAGTCCAGTGCTCCAAAATACAAAATACAAGATACCAAGAACAACAAAAATAACAAGGATACATATCGAGTAATACAAAGACAAAAAGACAGAAATTAAGCCGAATTAATGAAAACATTCTAGTTCAAACACATGCCGTGAATCTTGGCAAAAGCTTTAGATTGATAACAGCATGATGAGGCAAGAAAATGTGCTGATCCCAACCGATCTGTCCAATCAAGTGGTTTGTCATGGAAAAATTGTTCGTTCCAAATCTCATATGTTAGAGCCTGGACTGCATTGGACCATAATATTAGCAAAGCAAAATTAACCTCAAAACAATACACTCCAATAGGAAATTTTCCAAACATGAATTTGATAGCTTCTTCATTATTGATGCAGATTTCCTCTATTTTCATGTATTCAACTCACTATAATTTCGACTCCACCCATCTCTGTAGAAGAACTTATCAGGTGTTGACTTAATTGTCCATCTGGATCTTGAATCATCAGGTTGGCAAATTCCAGTGGGCAAATTTTCTTGGAGTAGTTAGAAATTGAATTAGCTGAATGGCTTTGTTCCTCAACTTTTCCACAGCTTGATTTTTTCTCCTTCTCATAGATAATCCATGAAGTCTACTGTGAGGGAAAAGTTTATGGTATTTTCTTAGCCTACGTTCTTGAAGCTCAATGGAATAGTAAACACTTTCCTGTTGGTATCTTCTTTCTGGTGGATTAATGTTTTTTTTCCCTTTTTTCCTAAAAAAAAAATATTATATTATTATTTTTTGGGAAAAGAACAACAACTTTCCTTGAGAAAAAAATGAAAGAATACACTGGCATACAAAAATCAAGCCCACAAAAAGGGAATCTCTCTACAAGAAGGGACTCCAATTAACAAAATCACGTCTATAGAATAATTATAAAAATCTTCGAAATCAAAGCCGAATGAGAAACATGAAAAGGAACAAGAGACTAAATTTCTCTAGCATCCCTCTTAACCACCCTAAACACCCTGCCATCCTTTCACCTCACAGTACCCAAATAATAGCACAAACGCTTGCAAGCCAGAGAAAACGGTCTTTCTCCCCAAACGGCGGATTGAGGAGGAACTCCTCGAACATGTCTCTAACATCTCTGTGACGAGCACACATCATGCCAAACATCTGGAAAAAAGAGTCCCAGACAAAGCTCGCAAACTCACGTCGCCAAAGAATATGATCCAAGTCTTTCTCCACCTTTCGACAAAAAATATAGCAAAAAGGCCTAACTAGCAACGACATCTTCCTAACAAGCCTATCCAATGTACTAATACAGTCGTGAAGAACTTGCCAAGTAAAGAATCTCACTTTCTAGGAACCTTAATCCTCCACAGTGACGAAAAGCTAGACCCACCCAAAATAGAAGGATCAACCAAACACTGGAAGAAAGACTTACAGGACAACCCTTCCAAAGGATTTGAACTCCAAACTCTCACATCTCTCCTCCCAAGACAAAAGCAGTGACTCTCAAGAAGAGAAAGGAGAGCAACTACATCTGTCGTTTCCTTATTGGAAAGAGCACGATACTCGAAGGAAAATGAGCAAGAGCTCCCTATCCACACAAGAAAATCAACCACGAAATGATTTTTAAAAGAAGACAAATGATACACCTGGGGGAATAATTCATAGAGAGGTCTTTCCCCTATCCATTGATCTTCCCAAAAAATATGTCTCTCTCCCATCCCCCATCGCACATTGGACCCAAAGAACAAAAGTAGGAAGCTCTTTTGAAATATCTTTCCAAAGATTTCGGTAGGTGCCTTTAATCCCTTTAGCCAACCACTCAAAAGGATGGGGACCATGTTTACTAACAATAATCTTGCGCCAAAGAGAATTGGGCTCAGACAAAAAGTGCCACAACCATTTGGCTAAAAGGGTTTTGTTACGAATCCTAAGGTTCCCAATTTCTAAACCCCCTAAAGAAATCGGTTTTTCGATAACCTCCCATCTTATAAGGTGCGAGCCTTTTCCTTTTCCTTTTCCTTCATCAATCCCTTCCCAAAAGAAATGATGCATTAGTCTCTCCAAACTCTTACGCACCTCACCTGAGCTCTAAAGAGAGAAGAAATAAACTAGAATGCCACTCAAGACGGACTTAATCAGAGTAAAATGACCCGCTTTAGAAATGAAATCCTTTTTCCAAGATGCCAACCTACTACGAACTTTATCCATCACAAGATCCTACAAGGAAACTCACTTTGGATTATTCTCGAGAGGAAGGCCCAGGTAAGAAGACGAAAGGCCCCCAACCTCACAACCAATCCACTCAGCCACCTTCTGATCTTATCCTCTAGACTATTGATACCTAAGACAAAACACTTTCCCCTGTTAATCTTCAAACCTGACATCTCCTCAAAGAAGGCAAGAACGTGATTCAGCATCAAGAATGAATTAACATTACCAGAACAAAAGAAGAGTGTCATCAGCAAATTGAAGATGGGATAGGGCCACCCTATCCTTACCCACCTTAAAGGACTCAATGATATTACCTTCGACACACTTACTCACCATTCTCTGAGGACATCCACAACAAGGAGAAAAAGAAAAGGGGAAAGAGGATCTCTCTACCTCAGACCTCTTGACGCCGTCATGTTACCCCTACAGCTCCCATTGATGAGAAATGAATAGCTCACATTCCTCATGCATCCCCACATCCATATACGTCACTTGTAACCAAAACCTTTCCTATCCAAAAACCTTATCTAGGAAGTTCCAATCCACGTGGTCATAAGCTTTTTCAAAATCGATCTTAAATAACACCCTTCCTCTTACTAGCTCGTCCTCTTACTAGCTCGTAGTCCTCACTCGCCTCATTAGCAATTCGAGAAGATGCCATCCTTGGTTGGGTATCTTTGCTGTATTCTTTGTCAAATAGCAAATGAAGATCTGGATCACTTATTTTGGAATTGTACTTATACATGTTATGTTTTGAACATCAATTTTGGAGTGTTCACTTTTCAGTTAGCCGGTTAGAGAGCATTTTAATGATATGATTTAGGAGATTCTCCATCATCCATTGCTCGATGGGAGAGTTATTTATTTATTTATTTGTTTTTTTTGAAGGTTGGGGTGTGTGCTTTAGTGTAGGGTATTTGGTGGGAGAGTAATAGTTTGAACTTCTCATGGGGTTGAGAGGGAACCTTTTGATGCTTGGTCCAACTCTTCTTTCTTTCTATTTCTTTTGGTGGATAAGAAGCGGATACGTTCGTAGGAAAGGTCTTCCTATATGTTAGTAGGATCAGGTAGCAAGTGTATAATCCAGTGTTTTGGGATTCCATGAAGCCTGACAATATCCTTAAAGAAAAGGTTAGCAATGTTTAAGTTCCTTTGCAAAAAAAAAAAAAAAAAGGTTTTAAGGCATCAATGGTTTTTTTGCGAGGAATAAAATGATAAACCTATCCACAACAACAAAAATGGAGGCATAACCTCATTGTGTTCGTGGCAAACCAAGAATGAAGTCCATGGAAAGGTCTTCCTATATGTTAGTAGGAACAGGTAGGTAGCGGAATGTATAAGCCAGTGTGTTGGGCGTGCCCCTTGGAGGTTTGACAAATGTAGCATCTTTTAACAAAATTATTGACATCATTTCGTAGTTGAGGCCAAAAGAATAGTTCTACAAGTGAAAGATATGTCTTGGCGTGACTAAAAAGTCTAGCAAGGCTGTTTGAGTGAGCTTCTCAAATGATGGCCTCTCAGAGAGAACTCTATGGACACAAAGCTGGTTTCCATGGAAAAGAAAACCATCTAAAAGGTGGTAATCTTTTGGAGGGGTGTTAGATAACGACTATGCCATGTGGAGTTAAGAGTCAACATAATAACATGCTGGAAAATGATCAAATGCAAATAATTCCTTCCAGGCAAGTTAAGAAAGCAAATTTCCAACTCAAGGCATTAACATCTATGTTAGAGCATCTTTGGAACTAACATCTATGTTAGAACATCTTTGGAACTATGGTTGCACCTCCCTCTGCACAATCAAGAACTTGAGAGCCTTCTAATCTGATATGACAGTGAACTTGTTGGCCTAATAAGTAATGGCACCATTTTTTAACCAAAAGGACCACAACCATTATTCTCGTTTGTAGATAGACTTCACTTGTGCACTTGGGGATAAGGCTTGACTAAAATAAACTATCGGGTTGAACACTTGCAAAAAAACAACCCCAAGCTTGGTTCCTGAAACATCAATCTCAATAATAAATGGAAGAGAAAAATTAGGAAGGGATAGTACTGAAAGAGTGGTCATCGCATGTTTAAGTCTATTGGAAGCCAACACTGCCCCCTCATTCCAAGCAAATGAATCTTTTTGAAGCAATTTAGTCAAAGTAGTTGTCAATTTTCCATAGTTCAACACAAACCGTTCGTAATGACTGGTCAACTCCAAAAAGCTTCTTAACTCTTGCATTCTTTAAATACGACCAATTAACCATCAAGCGTAGTTCATCCCCATCCGCGTCAACTCCTTTGCTCGACACCCAGTGGCCTAAGTATTGAATCTTGGATCTATTAACATACAACTTATGATGAGCACCACCATTTCCTTCAATGTCAATATCTCTTTCTCAATAGCATCAAAACGATCATCGACCAATTTCTGAGCCATCTTCCTTGTTATCCTCAGATATACCGAGCTCTAATACCAATTTGTTAGGTATCTACACAACCTGCACCTAAAAAATACCCAACAAGATACCAATCAAGGGAAGTATACTCCATGATATATGTATCTCAACCATCAAGTTCTAGAGTGTTGGCTCTCTCCTCTTCAAGGCTTCTCCTCAAAATATCCCCTTTATTAATGAGAATAATCCCTACATAAACCTTGCATCAAAAGCCATGGTCCCTACTCTCAACATAATAGAATCCACATTCCCCATCTTCTCTACCTATATGAATTCTCCTTTTTGCCTCTCTCTGTTTGTTTGTTTTTTTTTTTTTTTTTTTAAATGAAAAAAAATGACTTTCATTGAGAACAAAATGAAAGAATACACACATACAAAAAACCAAGCCCTGAGAAAAGGGGGCTCAAGGATGGGATCCCAATGATGCGAAATCATGCCTATAAAATAATTATAAAAGGTCTTGCCTCTCCTCTTATACGTGTGATAAATAGGAGGCCTTATAGTCTTCTACAAATTTTCAAGCCCACAAGTGAAGGGGAGTATTAAAGTGTTAATGTAATTAAATTTACCACAACCCATCAACTTAAGCTTTTGGGTTAATTGGTGATTTAGTATTATCAAATTTTTTGGGTCATTGAATTGCTCTTCCATTCTCCAAAGGAAACTTCCATCTCATTGCTTGTGTCCTATGTTTTCGCTTTGTGCGGCTAATAATGAAGACCTTCAACATCTCTTCTTTGAGTGTTGTTTTTCTAGGTCTTGTTGCTGGAATTTGTTCTCCATTTTTCACATACATTAAGTGTTCGATAATTCGTTTAAAACTAACGTTGATAAAATTTTGGTTGGCTCATCTTTGAAGCTCAATCTCAATTGTTATGGTCAAATGTGATTGAAGCTTTTCTTGCGGTGATTTGGATTGAAAGAAATTAGCTTGTTTTCCAAGACAAATCACTTTCTTGGTTTGACCGATTTGAAGCCACTCATTTCCAACGTAGTTATTATATTCCTTTAGTTTGTGTCTTTGTATTTTGAGCATCGGTTTCTTTTCATTATTCTAATGGAAAACTTTGTTTTCTTTTCAAAATAAAAAATTTGTAACCTATCAAATTCGTAATGAGTTCTTGTTTCTATTTCAAAAAGAAATGGTTAGTAGTGTGTAATGATATATTTGATACTTTTGAGTTTATTTTTTATGATATACTATGAAACTACTAATTGAAGGCTAACTTAGTTACCATTTCCAACACCTACTTGATGCCGAAAAACCACCTTTTTTGGTAATTGTTTTAGCATTTGATTTATTTTCAAATTAAAAAATGCGTTCAACATTATCATATCTGAACATTGTAAAGATTAGTTAGAACTTGATAGATTACTACTTCCCAGGCTATTCTTTCAAATATTTGGTACAAATAAATCAGAGTATTTTTTAAGACAACATACTTTTTGTTTTTTATTTAGCTATTTATTGGATATTTATCTCAAGATATTGGTAACATTTAGGACGCTTTTCTGTGGTTACAATAAAAGTTCTCTCTCTCTCTCTCTCTCTCTCTCTTATTTTGCTGCTTCATTCTACTTTTTCCCATCTTTATTGTTGTTCATATTTTCTTTTTCCCAAAAATTTACTTGTCGTCTTTTGTAACAATAAAAAGATTACTGTACAAAATGAAACATTTTTACCATTTGTTCGATTTTTCAGGTTAAAAACACCTGGCGTATATGTTCCAAGAAAGAAATCAGAAACTATACATAATCCTTACAAAGAAATTCATGAGGTTAATAGCTTTCTTGCAGCTAGTCGAAGAGTAGAGCTTTTTACTATTGATATTATGTTCATTTTTATGTTCTATTAATTTTCTCATGTATTTTTCTTCCACGTATTTGTATTTTGCTTCGAATGCAATCAAATAATGATTTGTATATTGGTCATTTTCGAGTGTTGTAGCCACTGTCAAGGTTATATAGCCTTATGTAGTTTAGGATGCCATTTATGTTTTGCGCTGGATTCATCTTTTTGTTGCACTTCACATTATATTTTTCAAATGATATTTTAATTAGTATGCCTATTTTCATGTTTTGCAGGTGGATATAGAACCTGTTCTTGCAATTGATTTTAACATCAAAGATATCCTTGGTTGTTTATACTGCGATATTTTATTGTTATTTTTTCTTTTTTGCGAAAACTTAATATGTTTTGGTTGCAGGAGTATTTTCTTGTTATCCTTAA

mRNA sequence

ATGGGGAAGCTGAAAGACAACAGTATCTCAGGGCACTTACCTACTGCCCAGAATTTTGCAGTTCACTATCCTGGTTATCCTTTGTCCAAGCGTCGGGCAATTGAAAGTCTAGGAGGAACACAATCAATTCTCAAGGTTCGTGATATCCAATCAAGTAAGTTAGAGCTTCGCTTTAGACCGGAAGATCCATATTCACATCCGACATATGGGGAGCTTCGCCCATGCAGTTGTTTTCTTTTGAAAATATGCCATTCAAAAAGTGATACTATCGAGGGAATCATGAAAGTTGAAAAAGAAGTACCTAGAGAAGATGAAGCCAACCTTGATTTTGAGATGGTTGCTCGTGTGCCTGAAGCATATCATTTTGAGGGCATGATTGACTACCAACACGTCATTGCTGTTCATGCGGATGCTACCCGGAGGAAGAAGGGGAATTGGGCAGAAATGCACGAACCATGTTTAGGGAAGGGTAATGCCGTTGATGTGGACAAGGAGGATACTATGATTTTAGTTCCTCCATTATTTTCGATTAAGGATGTGCCTGAAAATTTAGTGTTAAAAACACCTGGCGTATATGTTCCAAGAAAGAAATCAGAAACTATACATAATCCTTACAAAGAAATTCATGAGGTGGATATAGAACCTGTTCTTGCAATTGATTTTAACATCAAAGATATCCTTGGAGTATTTTCTTGTTATCCTTAA

Coding sequence (CDS)

ATGGGGAAGCTGAAAGACAACAGTATCTCAGGGCACTTACCTACTGCCCAGAATTTTGCAGTTCACTATCCTGGTTATCCTTTGTCCAAGCGTCGGGCAATTGAAAGTCTAGGAGGAACACAATCAATTCTCAAGGTTCGTGATATCCAATCAAGTAAGTTAGAGCTTCGCTTTAGACCGGAAGATCCATATTCACATCCGACATATGGGGAGCTTCGCCCATGCAGTTGTTTTCTTTTGAAAATATGCCATTCAAAAAGTGATACTATCGAGGGAATCATGAAAGTTGAAAAAGAAGTACCTAGAGAAGATGAAGCCAACCTTGATTTTGAGATGGTTGCTCGTGTGCCTGAAGCATATCATTTTGAGGGCATGATTGACTACCAACACGTCATTGCTGTTCATGCGGATGCTACCCGGAGGAAGAAGGGGAATTGGGCAGAAATGCACGAACCATGTTTAGGGAAGGGTAATGCCGTTGATGTGGACAAGGAGGATACTATGATTTTAGTTCCTCCATTATTTTCGATTAAGGATGTGCCTGAAAATTTAGTGTTAAAAACACCTGGCGTATATGTTCCAAGAAAGAAATCAGAAACTATACATAATCCTTACAAAGAAATTCATGAGGTGGATATAGAACCTGTTCTTGCAATTGATTTTAACATCAAAGATATCCTTGGAGTATTTTCTTGTTATCCTTAA

Protein sequence

MGKLKDNSISGHLPTAQNFAVHYPGYPLSKRRAIESLGGTQSILKVRDIQSSKLELRFRPEDPYSHPTYGELRPCSCFLLKICHSKSDTIEGIMKVEKEVPREDEANLDFEMVARVPEAYHFEGMIDYQHVIAVHADATRRKKGNWAEMHEPCLGKGNAVDVDKEDTMILVPPLFSIKDVPENLVLKTPGVYVPRKKSETIHNPYKEIHEVDIEPVLAIDFNIKDILGVFSCYP

Homology

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BLAST of Bhi05G000519 vs. TAIR 10
Match: AT3G49410.1 (Transcription factor IIIC, subunit 5 )

HSP 1 Score: 208.8 bits (530), Expect = 4.9e-54
Identity = 103/229 (44.98%), Postives = 153/229 (66.81%), Query Frame = 0


Query: 1   MGKLKDNSISGHLPTAQNFAVHYPGYPLSKRRAIESLGGTQSILKVRDIQSSKLELRFRP 60
           MG +++ +ISG LP+ + F VH+PGYP S  RAIE+LGG Q I + R+  S+KLELRFRP
Sbjct: 1   MGIIEEGTISGTLPSKEAFVVHFPGYPSSISRAIETLGGIQGITQARESISNKLELRFRP 60

Query: 61  EDPYSHPTYGELRPCSCFLLKICHS--KSDTIEGIMKVEKEVPREDEAN-LDFEMVARVP 120
           EDPY+HP  GE RPCS FLL+I     K    + ++   ++V  E+ +  L  ++VAR+ 
Sbjct: 61  EDPYAHPALGEQRPCSGFLLRISKQDIKKPESQSVLDTSRDVCLEEASPVLCADIVARLS 120

Query: 121 EAYHFEGMIDYQHVIAVHADATRRKKGNWAEMHEPCLGKGNAVDVDKEDTMILVPPLFSI 180
           E++HF+GM DYQHVI +HAD  ++KK  W ++ +P  GK + + +  ED M+L+P  F+ 
Sbjct: 121 ESFHFDGMADYQHVIPIHADIAQQKKRKWMDV-DPLTGKSDLMGLADEDVMMLLPQFFAP 180

Query: 181 KDVPENLVLKTPGVYVPRKKSETIHNPYKEIHEVDIEPVLAIDFNIKDI 227
           KD+P+N+ LK P    P+KK +      +  +E+D+ PV AIDF++K+I
Sbjct: 181 KDIPDNVALKPPATSGPKKKDDA---ATQNFYEIDVGPVFAIDFSVKEI 225

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BLAST of Bhi05G000519 vs. TAIR 10
Match: AT5G24450.1 (Transcription factor IIIC, subunit 5 )

HSP 1 Score: 205.7 bits (522), Expect = 4.1e-53
Identity = 109/233 (46.78%), Postives = 152/233 (65.24%), Query Frame = 0


Query: 1   MGKLKDNSISGHLPTAQNFAVHYPGYPLSKRRAIESLGGTQSILKVRDIQSSKLELRFRP 60
           MG +++ +ISG+LP+ + F VHYPGYP S  RA+E+LGG Q I   R+  S+KLEL FRP
Sbjct: 1   MGIIENGTISGNLPSKEAFVVHYPGYPSSISRAVETLGGIQGITTARESTSNKLELHFRP 60

Query: 61  EDPYSHPTYGELRPCSCFLLKICHSKSDTIEGIMKVEKEVPREDEANLD-------FEMV 120
           EDP +HP YGE R C+ FLLKI  SK D  +  +   + V    +A L         ++V
Sbjct: 61  EDPSAHPAYGERRHCNGFLLKI--SKEDVKKDSLPESQPVISTSDACLPEVRPALCADIV 120

Query: 121 ARVPEAYHFEGMIDYQHVIAVHADATRRKKGNWAEMHEPCLGKGNAVDVDKEDTMILVPP 180
           ARV E+Y F+GM+DYQHVI +HAD  ++KK  W E+ +   GK + +D+  ED M+L+P 
Sbjct: 121 ARVSESYCFDGMVDYQHVIPIHADIAQQKKRKWMEV-KSLAGKNDLMDMADEDVMMLLPQ 180

Query: 181 LFSIKDVPENLVLKTPGVYVPRKKSETIHNPYKEIHEVDIEPVLAIDFNIKDI 227
            FS KD P+NLVL+ P    P+KK E +    + ++E+DI PV AIDF++K+I
Sbjct: 181 FFSPKDRPDNLVLRLPVTSSPKKKDEEL---TQNLYEIDIGPVFAIDFSVKEI 227

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BLAST of Bhi05G000519 vs. ExPASy Swiss-Prot
Match: Q54GS8 (General transcription factor 3C polypeptide 5 OS=Dictyostelium discoideum OX=44689 GN=gtf3c5 PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.3e-13
Identity = 56/227 (24.67%), Postives = 95/227 (41.85%), Query Frame = 0


Query: 6   DNSISGHLPTAQNFAVHYPGYPLSKRRAIESLGGTQSILKV-RDIQSSKLELRFRPEDPY 65
           D +I   LPT   + + YP    +  +AIES+GG   I  V +  +   L+L+FRP +P 
Sbjct: 33  DKAIIRPLPTKAYYGLEYPANVQNADKAIESVGGLSKISNVIKSREKEYLQLKFRPNNPT 92

Query: 66  SHPTYGELRPCSCFLLKI----------------------------CHSKSDTIEGIMKV 125
             PT+G   P    LL++                              S   T     + 
Sbjct: 93  CKPTFGTKSPTCHLLLRVRPNKQQTQTQTQTQTQDNNEEMNSPKPTIQSPKTTSRSKQQQ 152

Query: 126 EKEVPREDEANLDFEMVARVPEAYHFEGMIDYQHVIAVHADATRRKKGNWAEMHEPCLGK 185
           +++ P+E+E   D  ++A VP    F+G+ D+Q++I    + T+ +  N  +       K
Sbjct: 153 QQQQPQENE-KFDATIIALVPSTIRFDGLCDFQYLIKSDNNNTKSESDNVNDSSSSSSSK 212

Query: 186 GNAV----------------DVDKEDTMILVPPLFSIKDVPENLVLK 188
              +                ++ K++ M L+PPLFS  D P+N + K
Sbjct: 213 TVPITKQKDQYYVQQYSDNNEIMKDEPMNLIPPLFSRIDFPQNYLFK 258

[Close]

BLAST of Bhi05G000519 vs. ExPASy Swiss-Prot
Match: Q8R2T8 (General transcription factor 3C polypeptide 5 OS=Mus musculus OX=10090 GN=Gtf3c5 PE=2 SV=2)

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-12
Identity = 50/186 (26.88%), Postives = 89/186 (47.85%), Query Frame = 0


Query: 21  VHYPGYPLSKRRAIESLGGTQSILKVRDIQSSKLELRFRPEDPYSHPTYGELRPCSCFLL 80
           V YPG   ++ + +++LGG +S+ ++    + +LEL FRP+DPY HP        S  LL
Sbjct: 27  VEYPGVVRNEAKMLQTLGGEESVSRIYTDPTKRLELYFRPKDPYCHPVCANRFSTSSLLL 86

Query: 81  KICHSKSDTIEGIMKVEKEVPREDEANLDFEMVARVPEAYHFEGMIDYQHVIAVHADATR 140
           +I   ++    G++  E       +   + E++  +   Y F+GM D+Q+ +AVH +A  
Sbjct: 87  RI-RKRTRRRRGVLGDE----AHPQVTFNLEIIGIISTIYKFQGMSDFQY-LAVHTEA-- 146

Query: 141 RKKGNWAEMHEPCLGKGNAVD--VDKEDTMILVPPLFSIKDVPENLVLKTPGVYVPRKKS 200
              G    M++  L +    +    +E  + + PP+FS  D P +   +        +  
Sbjct: 147 --GGKHVSMYDRVLMRKPEKEEFFHQELPLYIPPPIFSRLDTPVDYFYRP-----ETQHR 197

Query: 201 ETIHNP 205
           E  HNP
Sbjct: 207 EGYHNP 197

[Close]

BLAST of Bhi05G000519 vs. ExPASy Swiss-Prot
Match: Q9Y5Q8 (General transcription factor 3C polypeptide 5 OS=Homo sapiens OX=9606 GN=GTF3C5 PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.3e-11
Identity = 47/163 (28.83%), Postives = 77/163 (47.24%), Query Frame = 0


Query: 21  VHYPGYPLSKRRAIESLGGTQSILKVRDIQSSKLELRFRPEDPYSHPTYGELRPCSCFLL 80
           V YPG      + + +LGG + + ++    + +LEL FRP+DPY HP        S  LL
Sbjct: 27  VEYPGVVRDVAKMLPTLGGEEGVSRIYADPTKRLELYFRPKDPYCHPVCANRFSTSSLLL 86

Query: 81  KICHSKSDTIEGIMKVEKEVPREDEANLDFEMVARVPEAYHFEGMIDYQHVIAVHADATR 140
           +I   ++   +G++  E       E   D E++  +   Y F+GM D+Q+ +AVH +A  
Sbjct: 87  RI-RKRTRRQKGVLGTE----AHSEVTFDMEILGIISTIYKFQGMSDFQY-LAVHTEA-- 146

Query: 141 RKKGNWAEMHEP--CLGKGNAVDVDKEDTMILVPPLFSIKDVP 182
              G    M++    L         +E  + + PP+FS  D P
Sbjct: 147 --GGKHTSMYDKVLMLRPEKEAFFHQELPLYIPPPIFSRLDAP 179

[Close]

BLAST of Bhi05G000519 vs. ExPASy TrEMBL
Match: A0A0A0KV91 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630700 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.1e-109
Identity = 197/227 (86.78%), Postives = 209/227 (92.07%), Query Frame = 0


Query: 1   MGKLKDNSISGHLPTAQNFAVHYPGYPLSKRRAIESLGGTQSILKVRDIQSSKLELRFRP 60
           MGKLKDN+ISG LPTAQNFAVHYP YP SK +AIESLGGTQSILKVR +QS+KLELRFRP
Sbjct: 1   MGKLKDNTISGFLPTAQNFAVHYPSYPSSKHQAIESLGGTQSILKVRGLQSNKLELRFRP 60

Query: 61  EDPYSHPTYGELRPCSCFLLKICHSKSDTIEGIMKVEKEVPREDEANLDFEMVARVPEAY 120
            DPYSHPTYGELRPCS FLLKICHSKSDT EGIMKVE EVP EDE NLDFEMVARVPEAY
Sbjct: 61  ADPYSHPTYGELRPCSGFLLKICHSKSDTNEGIMKVE-EVPGEDEVNLDFEMVARVPEAY 120

Query: 121 HFEGMIDYQHVIAVHADATRRKKGNWAEMHEPCLGKGNAVDVDKEDTMILVPPLFSIKDV 180
           HFEGM+DYQHV+AVHADAT+RKKGNWAEMHEP LGK NA+DVDKEDTMILVPPLFSIKDV
Sbjct: 121 HFEGMVDYQHVVAVHADATQRKKGNWAEMHEPRLGKSNAIDVDKEDTMILVPPLFSIKDV 180

Query: 181 PENLVLKTPGVYVPRKKSETIHNPYKEIHEVDIEPVLAIDFNIKDIL 228
           PENLVLKTP +Y+PRKKSET+ NP + I EVDIEPVLAIDFNIKDIL
Sbjct: 181 PENLVLKTPAIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKDIL 226

[Close]

BLAST of Bhi05G000519 vs. ExPASy TrEMBL
Match: A0A1S4E516 (general transcription factor 3C polypeptide 5-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502764 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.6e-108
Identity = 198/227 (87.22%), Postives = 207/227 (91.19%), Query Frame = 0


Query: 1   MGKLKDNSISGHLPTAQNFAVHYPGYPLSKRRAIESLGGTQSILKVRDIQSSKLELRFRP 60
           MGKLKDN+ISG LP AQNFAVHYPGYP SK RAIESLGGTQSILKVR +QS+KLELRFRP
Sbjct: 1   MGKLKDNTISGFLPAAQNFAVHYPGYPSSKHRAIESLGGTQSILKVRGLQSNKLELRFRP 60

Query: 61  EDPYSHPTYGELRPCSCFLLKICHSKSDTIEGIMKVEKEVPREDEANLDFEMVARVPEAY 120
            DPYSHPTYGELRPCSC LLKICHSK DT EGIMKVE  VP EDE NLDFEMVARVPEAY
Sbjct: 61  ADPYSHPTYGELRPCSCLLLKICHSKCDTNEGIMKVE-NVPGEDEVNLDFEMVARVPEAY 120

Query: 121 HFEGMIDYQHVIAVHADATRRKKGNWAEMHEPCLGKG-NAVDVDKEDTMILVPPLFSIKD 180
           HFEGM+DYQHV+AVHADAT RKKGNWAEMHEP LGKG NAVDVDKEDTMILVPPLFSIKD
Sbjct: 121 HFEGMVDYQHVVAVHADATWRKKGNWAEMHEPRLGKGNNAVDVDKEDTMILVPPLFSIKD 180

Query: 181 VPENLVLKTPGVYVPRKKSETIHNPYKEIHEVDIEPVLAIDFNIKDI 227
           VPENLVLKTPG+Y+PRKKSET+ NP + I EVDIEPVLAIDFNIKDI
Sbjct: 181 VPENLVLKTPGIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKDI 226

[Close]

BLAST of Bhi05G000519 vs. ExPASy TrEMBL
Match: A0A6J1EPX9 (general transcription factor 3C polypeptide 5-like OS=Cucurbita moschata OX=3662 GN=LOC111434581 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.7e-105
Identity = 187/226 (82.74%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MGKLKDNSISGHLPTAQNFAVHYPGYPLSKRRAIESLGGTQSILKVRDIQSSKLELRFRP 60
           MGKLKDN+ISG LPTAQ FAVHYPGYP SKRRA+E+LGG QSILKVRD+QS+KLELRFRP
Sbjct: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAVETLGGKQSILKVRDLQSNKLELRFRP 60

Query: 61  EDPYSHPTYGELRPCSCFLLKICHSKSDTIEGIMKVEKEVPREDEANLDFEMVARVPEAY 120
           EDPYSHPT+GELRPCSCFLLKICH KSD+ EGI KVEKEVPREDE NLDFEMVA VPEAY
Sbjct: 61  EDPYSHPTHGELRPCSCFLLKICHPKSDSTEGIKKVEKEVPREDEINLDFEMVACVPEAY 120

Query: 121 HFEGMIDYQHVIAVHADATRRKKGNWAEMHEPCLGKGNAVDVDKEDTMILVPPLFSIKDV 180
           HFEGM DYQHV+A HADAT+RKKG+W EMHEPCLGK NA+DVDKEDTMILVPPLF++KDV
Sbjct: 121 HFEGMADYQHVVATHADATKRKKGSWTEMHEPCLGKVNAIDVDKEDTMILVPPLFALKDV 180

Query: 181 PENLVLKTPGVYVPRKKSETIHNPYKEIHEVDIEPVLAIDFNIKDI 227
           PE+LVLKTP ++ PRKK ET H P     EVDIEPVLAIDFNIKDI
Sbjct: 181 PESLVLKTPSMFTPRKKQETPHTPC----EVDIEPVLAIDFNIKDI 222

[Close]

BLAST of Bhi05G000519 vs. ExPASy TrEMBL
Match: A0A6J1JKL2 (general transcription factor 3C polypeptide 5-like OS=Cucurbita maxima OX=3661 GN=LOC111486648 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.8e-103
Identity = 185/226 (81.86%), Postives = 200/226 (88.50%), Query Frame = 0


Query: 1   MGKLKDNSISGHLPTAQNFAVHYPGYPLSKRRAIESLGGTQSILKVRDIQSSKLELRFRP 60
           MGKLKDN+ISG LPTAQ FAVHYPGYP SKRRAIE+LGG QSILKVRD+QS+KLELRFRP
Sbjct: 1   MGKLKDNTISGFLPTAQVFAVHYPGYPSSKRRAIETLGGKQSILKVRDLQSNKLELRFRP 60

Query: 61  EDPYSHPTYGELRPCSCFLLKICHSKSDTIEGIMKVEKEVPREDEANLDFEMVARVPEAY 120
           ED YSHPT+GELRPCSCFLLKI H KSD+ EGI  VEKEVPREDE NLDFEMVA VPEAY
Sbjct: 61  EDSYSHPTHGELRPCSCFLLKIRHPKSDSTEGIKNVEKEVPREDEINLDFEMVACVPEAY 120

Query: 121 HFEGMIDYQHVIAVHADATRRKKGNWAEMHEPCLGKGNAVDVDKEDTMILVPPLFSIKDV 180
           HFEGM DYQHV+A HADAT+RKKGNW EMHEPCLGK NA+DVDKEDTMILVPP+F++KDV
Sbjct: 121 HFEGMADYQHVVATHADATKRKKGNWTEMHEPCLGKVNAIDVDKEDTMILVPPVFALKDV 180

Query: 181 PENLVLKTPGVYVPRKKSETIHNPYKEIHEVDIEPVLAIDFNIKDI 227
           PE+LVLKTP ++ PRKK ET H P     EVDIEPVLAIDFNIKDI
Sbjct: 181 PESLVLKTPSMFTPRKKQETPHTPC----EVDIEPVLAIDFNIKDI 222

[Close]

BLAST of Bhi05G000519 vs. ExPASy TrEMBL
Match: A0A1S3CMW8 (general transcription factor 3C polypeptide 5-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502764 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.2e-102
Identity = 192/227 (84.58%), Postives = 201/227 (88.55%), Query Frame = 0


Query: 1   MGKLKDNSISGHLPTAQNFAVHYPGYPLSKRRAIESLGGTQSILKVRDIQSSKLELRFRP 60
           MGKLKDN+ISG LP AQNFAVHYPGYP SK RAIESLGGTQSILKVR +QS+KLELRFRP
Sbjct: 1   MGKLKDNTISGFLPAAQNFAVHYPGYPSSKHRAIESLGGTQSILKVRGLQSNKLELRFRP 60

Query: 61  EDPYSHPTYGELRPCSCFLLKICHSKSDTIEGIMKVEKEVPREDEANLDFEMVARVPEAY 120
            DPYSHPTYGELRPCS       HSK DT EGIMKVE  VP EDE NLDFEMVARVPEAY
Sbjct: 61  ADPYSHPTYGELRPCS-------HSKCDTNEGIMKVE-NVPGEDEVNLDFEMVARVPEAY 120

Query: 121 HFEGMIDYQHVIAVHADATRRKKGNWAEMHEPCLGKG-NAVDVDKEDTMILVPPLFSIKD 180
           HFEGM+DYQHV+AVHADAT RKKGNWAEMHEP LGKG NAVDVDKEDTMILVPPLFSIKD
Sbjct: 121 HFEGMVDYQHVVAVHADATWRKKGNWAEMHEPRLGKGNNAVDVDKEDTMILVPPLFSIKD 180

Query: 181 VPENLVLKTPGVYVPRKKSETIHNPYKEIHEVDIEPVLAIDFNIKDI 227
           VPENLVLKTPG+Y+PRKKSET+ NP + I EVDIEPVLAIDFNIKDI
Sbjct: 181 VPENLVLKTPGIYIPRKKSETVQNPCEVICEVDIEPVLAIDFNIKDI 219

The following BLAST results are available for this feature:

BLAST of Bhi05G000519 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G49410.1	4.9e-54	44.98	Transcription factor IIIC, subunit 5	[more]
AT5G24450.1	4.1e-53	46.78	Transcription factor IIIC, subunit 5	[more]

BLAST of Bhi05G000519 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54GS8	5.3e-13	24.67	General transcription factor 3C polypeptide 5 OS=Dictyostelium discoideum OX=446...	[more]
Q8R2T8	4.5e-12	26.88	General transcription factor 3C polypeptide 5 OS=Mus musculus OX=10090 GN=Gtf3c5...	[more]
Q9Y5Q8	1.3e-11	28.83	General transcription factor 3C polypeptide 5 OS=Homo sapiens OX=9606 GN=GTF3C5 ...	[more]

BLAST of Bhi05G000519 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV91	3.1e-109	86.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630700 PE=4 SV=1	[more]
A0A1S4E516	1.6e-108	87.22	general transcription factor 3C polypeptide 5-like isoform X1 OS=Cucumis melo OX...	[more]
A0A6J1EPX9	2.7e-105	82.74	general transcription factor 3C polypeptide 5-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JKL2	9.8e-103	81.86	general transcription factor 3C polypeptide 5-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A1S3CMW8	2.2e-102	84.58	general transcription factor 3C polypeptide 5-like isoform X2 OS=Cucumis melo OX...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR042536	TFIIIC, subcomplex tauA subunit Sfc1, triple barrel domain superfamily	GENE3D	3.30.200.160	TFIIIC, subcomplex tauA, subunit Sfc1, barrel domain	coord: 9..132 e-value: 1.2E-28 score: 101.3
IPR041499	Transcription factor IIIC subunit Tfc1/Sfc1, triple barrel domain	PFAM	PF17682	Tau95_N	coord: 20..130 e-value: 2.9E-19 score: 69.6
IPR040454	Transcription factor IIIC subunit Tfc1/Sfc1	PANTHER	PTHR13230	GENERAL TRANSCRIPTION FACTOR IIIC, POLYPEPTIDE 5	coord: 5..222
None	No IPR available	PANTHER	PTHR13230:SF5	GENERAL TRANSCRIPTION FACTOR 3C POLYPEPTIDE 5	coord: 5..222

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000519	Bhi05M000519	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006384	transcription initiation from RNA polymerase III promoter
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000127	transcription factor TFIIIC complex
molecular_function	GO:0003677	DNA binding