Bhi05G000439 (gene) Wax gourd (B227) v1

Overview


Name	Bhi05G000439
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	heavy metal-associated isoprenylated plant protein 39-like
Location	chr5: 16207735 .. 16208736 (+)
RNA-Seq Expression	Bhi05G000439
Synteny	Bhi05G000439

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCGTGCCTTCTTAAACCGATGACACTCGAATACGTCACTATTGAAAACGAATATAATCCCTTCTCTCCCCCTTTTTGGATTTTTACCCCTTGAAATCGCGCTGTTAGATAGCGACTTCCCCTTCCCCCTTTCCATAAAGCCTTTCTTCCCTCACTTCATTCCCTTTCATTTCACCTCTCTCCCTTCCCCTTCCCCTTCCCTTCACTAAAATGGCTCAGGTTCTTTCTTCTTCCTTTTTTTTCTCTGTATTTCCTCTTTCGCTTCTTCCTTCGTAATCTAATGATTTGGTTTGTCTTCGATAATTTTGAAAATTGTTGCAGAAAGTTGTGCTGAAAGTGATGACGATGACGGACGAGAAGACGAAGCAGAAAGCAATCGAAGCTGCTGCCGACATCTACGGTTCGTATCTTCATCTTCCTTGGACAATTTTCTGATCTGTAATTGTGGAAAGAAAATGGATCGACTCTGTTTGTTTTGTATATGGAAAATTTGGATTACGGTTAGAAGTGATTTAGATTGTGATGTTGGGATAATTAGGAGTTGATTCGATTGCGGCGGATCTGAAGGATCAGAAACTGACGGTGATTGGATCGATGGATGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTTGGTAAAGTTGATATAATATCAGTTGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAAGAGGAGAAGAAAGAAGAGAAAAAGGAAGAGAAAAAAGAGGAAAAAAAAGAGGAGAAGAAAGAGGAGAAAAAGTAAAGTTGAAGTGAAAAAGTACAATTCCTTTACCCTTCTTTCAATTTTGATTTTCCATTTACATATATGAGAATTCTAATTTAAATAACATCACTTTTTCTTTTCTTTTTTTAAATATTTCTTTTGGCTTCATTTAAATACTTGAAGAATCCATATGAAAACATTACATTGTTATATGTTGTTGTTGCTCTTATTATTTTGTTGTCCCGATAAAGTTTATTTTGCGTTATAACGGTC

mRNA sequence

TGCGTGCCTTCTTAAACCGATGACACTCGAATACGTCACTATTGAAAACGAATATAATCCCTTCTCTCCCCCTTTTTGGATTTTTACCCCTTGAAATCGCGCTGTTAGATAGCGACTTCCCCTTCCCCCTTTCCATAAAGCCTTTCTTCCCTCACTTCATTCCCTTTCATTTCACCTCTCTCCCTTCCCCTTCCCCTTCCCTTCACTAAAATGGCTCAGAAAGTTGTGCTGAAAGTGATGACGATGACGGACGAGAAGACGAAGCAGAAAGCAATCGAAGCTGCTGCCGACATCTACGGAGTTGATTCGATTGCGGCGGATCTGAAGGATCAGAAACTGACGGTGATTGGATCGATGGATGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTTGGTAAAGTTGATATAATATCAGTTGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAAGAGGAGAAGAAAGAAGAGAAAAAGGAAGAGAAAAAAGAGGAAAAAAAAGAGGAGAAGAAAGAGGAGAAAAAGTAAAGTTGAAGTGAAAAAGTACAATTCCTTTACCCTTCTTTCAATTTTGATTTTCCATTTACATATATGAGAATTCTAATTTAAATAACATCACTTTTTCTTTTCTTTTTTTAAATATTTCTTTTGGCTTCATTTAAATACTTGAAGAATCCATATGAAAACATTACATTGTTATATGTTGTTGTTGCTCTTATTATTTTGTTGTCCCGATAAAGTTTATTTTGCGTTATAACGGTC

Coding sequence (CDS)

ATGGCTCAGAAAGTTGTGCTGAAAGTGATGACGATGACGGACGAGAAGACGAAGCAGAAAGCAATCGAAGCTGCTGCCGACATCTACGGAGTTGATTCGATTGCGGCGGATCTGAAGGATCAGAAACTGACGGTGATTGGATCGATGGATGCGGTGGCGATTGTGAAGAAATTGAAGAAAGTTGGTAAAGTTGATATAATATCAGTTGGACCTGCAAAGGAAGAGAAGAAGGAAGAGAAGAAAGAGGAGAAGAAAGAAGAGAAAAAGGAAGAGAAAAAAGAGGAAAAAAAAGAGGAGAAGAAAGAGGAGAAAAAGTAA

Protein sequence

MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK

Homology

[Close]

BLAST of Bhi05G000439 vs. TAIR 10
Match: AT5G23760.1 (Copper transport protein family )

HSP 1 Score: 137.9 bits (346), Expect = 4.7e-33
Identity = 91/103 (88.35%), Postives = 101/103 (98.06%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKV+TMTD+KTKQKAIEAAADI+GVDSIAAD+KDQKLTVIG MDAVA+VKKLKK
Sbjct: 1   MAQKVVLKVLTMTDDKTKQKAIEAAADIFGVDSIAADMKDQKLTVIGLMDAVAVVKKLKK 60

Query: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEE 104
           VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEKKEE+KEE+ ++
Sbjct: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEQKEEEPKK 103

[Close]

BLAST of Bhi05G000439 vs. TAIR 10
Match: AT5G52740.1 (Copper transport protein family )

HSP 1 Score: 52.0 bits (123), Expect = 3.4e-07
Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 3  QKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 62
          Q VVLK + +  EKTKQKA+     + GV+S+  ++KD KLTV G +DA  IVKKLKK+ 
Sbjct: 2  QVVVLK-LDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKIC 61

Query: 63 KVDIISVGPAKEEKKEEKKEEKKEEKK 90
            + ISVGP KE +K++  + KK E K
Sbjct: 62 HTEFISVGPVKEPEKKKPDDPKKPETK 85

[Close]

BLAST of Bhi05G000439 vs. TAIR 10
Match: AT1G01490.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 1.3e-06
Identity = 50/104 (48.08%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 3   QKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 62
           +K+VLK + + D++ KQKA++  + + G+DSIA D+K++KLTVIG++D V +V KL+K  
Sbjct: 2   KKIVLK-LDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 61

Query: 63  KV-DIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
            + DI+ VGPAKE +KE+K+E KKE   E  K+E +  K+E KK
Sbjct: 62  PMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAPKEEGKK 104

[Close]

BLAST of Bhi05G000439 vs. TAIR 10
Match: AT1G01490.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 1.3e-06
Identity = 50/104 (48.08%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 3   QKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 62
           +K+VLK + + D++ KQKA++  + + G+DSIA D+K++KLTVIG++D V +V KL+K  
Sbjct: 2   KKIVLK-LDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 61

Query: 63  KV-DIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
            + DI+ VGPAKE +KE+K+E KKE   E  K+E +  K+E KK
Sbjct: 62  PMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAPKEEGKK 104

[Close]

BLAST of Bhi05G000439 vs. ExPASy Swiss-Prot
Match: Q9LTE3 (Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX=3702 GN=HIPP12 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.8e-06
Identity = 43/87 (49.43%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 3  QKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 62
          Q VVLK + +  EKTKQKA+     + GV+S+  ++KD KLTV G +DA  IVKKLKK+ 
Sbjct: 2  QVVVLK-LDVHCEKTKQKAMSTVCCLSGVNSV--EVKDGKLTVTGEIDAYMIVKKLKKIC 61

Query: 63 KVDIISVGPAKEEKKEEKKEEKKEEKK 90
            + ISVGP KE +K++  + KK E K
Sbjct: 62 HTEFISVGPVKEPEKKKPDDPKKPETK 85

[Close]

BLAST of Bhi05G000439 vs. ExPASy Swiss-Prot
Match: O03982 (Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX=3702 GN=HIPP39 PE=2 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.8e-05
Identity = 50/104 (48.08%), Postives = 76/104 (73.08%), Query Frame = 0


Query: 3   QKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKKVG 62
           +K+VLK + + D++ KQKA++  + + G+DSIA D+K++KLTVIG++D V +V KL+K  
Sbjct: 2   KKIVLK-LDLHDDRAKQKALKTVSTLPGIDSIAMDMKEKKLTVIGTVDPVNVVSKLRKYW 61

Query: 63  KV-DIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
            + DI+ VGPAKE +KE+K+E KKE   E  K+E +  K+E KK
Sbjct: 62  PMTDIVLVGPAKEPEKEKKEEPKKEGGGEPPKKEGEAPKEEGKK 104

[Close]

BLAST of Bhi05G000439 vs. ExPASy TrEMBL
Match: A0A6J1I6X1 (heavy metal-associated isoprenylated plant protein 39 OS=Cucurbita maxima OX=3661 GN=LOC111470547 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.6e-34
Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKVMTMTD+KTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 105

[Close]

BLAST of Bhi05G000439 vs. ExPASy TrEMBL
Match: A0A6J1EZN9 (heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111438043 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.6e-34
Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKVMTMTD+KTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVD+ISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 61  VGKVDLISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 105

[Close]

BLAST of Bhi05G000439 vs. ExPASy TrEMBL
Match: A0A6J1E094 (heavy metal-associated isoprenylated plant protein 39 OS=Momordica charantia OX=3673 GN=LOC111025962 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.4e-34
Identity = 103/105 (98.10%), Postives = 105/105 (100.00%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKVMTMTD+KTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVMTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60

Query: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKE+KKEEKK
Sbjct: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEDKKEEKK 105

[Close]

BLAST of Bhi05G000439 vs. ExPASy TrEMBL
Match: A0A6J1A686 (heavy metal-associated isoprenylated plant protein 39 OS=Herrania umbratica OX=108875 GN=LOC110415078 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 3.7e-33
Identity = 100/105 (95.24%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKV+TMTD+KTKQKAIEAAADIYGVDSIAADLKDQKLTV+G MDAVA+VKKLKK
Sbjct: 36  MAQKVVLKVLTMTDDKTKQKAIEAAADIYGVDSIAADLKDQKLTVVGQMDAVAVVKKLKK 95

Query: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 96  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 140

[Close]

BLAST of Bhi05G000439 vs. ExPASy TrEMBL
Match: A0A2N9GN73 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28897 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.1e-32
Identity = 99/105 (94.29%), Postives = 104/105 (99.05%), Query Frame = 0


Query: 1   MAQKVVLKVMTMTDEKTKQKAIEAAADIYGVDSIAADLKDQKLTVIGSMDAVAIVKKLKK 60
           MAQKVVLKV+TMTD+KTKQKAIEAAADI+G+DSIAADLKDQKLTVIG MDAVAIVKKLKK
Sbjct: 1   MAQKVVLKVLTMTDDKTKQKAIEAAADIFGIDSIAADLKDQKLTVIGQMDAVAIVKKLKK 60

Query: 61  VGKVDIISVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 106
           VGKVDI+SVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK
Sbjct: 61  VGKVDIVSVGPAKEEKKEEKKEEKKEEKKEEKKEEKKEEKKEEKK 105

The following BLAST results are available for this feature:

BLAST of Bhi05G000439 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23760.1	4.7e-33	88.35	Copper transport protein family	[more]
AT5G52740.1	3.4e-07	49.43	Copper transport protein family	[more]
AT1G01490.1	1.3e-06	48.08	Heavy metal transport/detoxification superfamily protein	[more]
AT1G01490.2	1.3e-06	48.08	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of Bhi05G000439 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTE3	4.8e-06	49.43	Heavy metal-associated isoprenylated plant protein 12 OS=Arabidopsis thaliana OX...	[more]
O03982	1.8e-05	48.08	Heavy metal-associated isoprenylated plant protein 39 OS=Arabidopsis thaliana OX...	[more]

BLAST of Bhi05G000439 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6X1	5.6e-34	98.10	heavy metal-associated isoprenylated plant protein 39 OS=Cucurbita maxima OX=366...	[more]
A0A6J1EZN9	5.6e-34	98.10	heavy metal-associated isoprenylated plant protein 39-like OS=Cucurbita moschata...	[more]
A0A6J1E094	7.4e-34	98.10	heavy metal-associated isoprenylated plant protein 39 OS=Momordica charantia OX=...	[more]
A0A6J1A686	3.7e-33	95.24	heavy metal-associated isoprenylated plant protein 39 OS=Herrania umbratica OX=1...	[more]
A0A2N9GN73	1.1e-32	94.29	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28897 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 72..105
None	No IPR available	GENE3D	3.30.70.100		coord: 1..75 e-value: 3.7E-19 score: 70.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..105
None	No IPR available	PANTHER	PTHR45811:SF43	PROTEIN PXR1-LIKE ISOFORM X1	coord: 2..105
None	No IPR available	PANTHER	PTHR45811	COPPER TRANSPORT PROTEIN FAMILY-RELATED	coord: 2..105
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 7..63 e-value: 6.3E-6 score: 26.5
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 2..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi05M000439	Bhi05M000439	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding