Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAACTTCTTCTCACGTACAATGTAGACATCAAGTCTAAGAATTTGAAAGGCTTTTCAGCTGTGGACATATTAAGACAAAATGAATTTTTAGGAGACAAAGAGTTAGAAGAGAAGCTGGATGATGAGCACAATATTATTGTAAAACAACTACGACTTGCAAAGATATTGTTGAAGTGGACATTGTGGTTTATAAAGAGACTAGCGATAACAGATCATCGTGAGATTGTAGACATGTCGAAAGAGGATCGAAATGCGATATTAGTAGTTTCTGTGCTCATTGCAACAGCGACTTACCAAGCTGTCTTATCTCCACCAGACAAAGAGAAAATTGAATTAATTTATATGAGCTACAACTGTCGGTACTTTACATACATACTTTTCAAATATTTCAACACCTTGGCCTTTGTTGCATCAATGATAGAGATTTGCCTTCATCTTCCTTCTGGGATTCGTTACACTCTCCATTTGGTTCTCCCTCTGGTTAATTGCTACATATTGCTTATGCTTTTTTGGTTGTCATGTTATACTGGAGTTCTTACAACTGGTGCGGTTATTGTTTTTATTTTGACCAAAATCCCAGCACTTCGACAAAAAATAAGTGGAGATCTTAACCCAAAGAAGAAGATCAAACGTTTGGAGGATGAAGAGAGAATTGACTGA
mRNA sequence
ATGGTGAAACTTCTTCTCACGTACAATGTAGACATCAAGTCTAAGAATTTGAAAGGCTTTTCAGCTGTGGACATATTAAGACAAAATGAATTTTTAGGAGACAAAGAGTTAGAAGAGAAGCTGGATGATGAGCACAATATTATTGTAAAACAACTACGACTTGCAAAGATATTGTTGAAGTGGACATTGTGGTTTATAAAGAGACTAGCGATAACAGATCATCGTGAGATTGTAGACATGTCGAAAGAGGATCGAAATGCGATATTAGTAGTTTCTGTGCTCATTGCAACAGCGACTTACCAAGCTGTCTTATCTCCACCAGACAAAGAGAAAATTGAATTAATTTATATGAGCTACAACTGTCGGTACTTTACATACATACTTTTCAAATATTTCAACACCTTGGCCTTTGTTGCATCAATGATAGAGATTTGCCTTCATCTTCCTTCTGGGATTCGTTACACTCTCCATTTGGTTCTCCCTCTGGTTAATTGCTACATATTGCTTATGCTTTTTTGGTTGTCATGTTATACTGGAGTTCTTACAACTGGTGCGGTTATTGTTTTTATTTTGACCAAAATCCCAGCACTTCGACAAAAAATAAGTGGAGATCTTAACCCAAAGAAGAAGATCAAACGTTTGGAGGATGAAGAGAGAATTGACTGA
Coding sequence (CDS)
ATGGTGAAACTTCTTCTCACGTACAATGTAGACATCAAGTCTAAGAATTTGAAAGGCTTTTCAGCTGTGGACATATTAAGACAAAATGAATTTTTAGGAGACAAAGAGTTAGAAGAGAAGCTGGATGATGAGCACAATATTATTGTAAAACAACTACGACTTGCAAAGATATTGTTGAAGTGGACATTGTGGTTTATAAAGAGACTAGCGATAACAGATCATCGTGAGATTGTAGACATGTCGAAAGAGGATCGAAATGCGATATTAGTAGTTTCTGTGCTCATTGCAACAGCGACTTACCAAGCTGTCTTATCTCCACCAGACAAAGAGAAAATTGAATTAATTTATATGAGCTACAACTGTCGGTACTTTACATACATACTTTTCAAATATTTCAACACCTTGGCCTTTGTTGCATCAATGATAGAGATTTGCCTTCATCTTCCTTCTGGGATTCGTTACACTCTCCATTTGGTTCTCCCTCTGGTTAATTGCTACATATTGCTTATGCTTTTTTGGTTGTCATGTTATACTGGAGTTCTTACAACTGGTGCGGTTATTGTTTTTATTTTGACCAAAATCCCAGCACTTCGACAAAAAATAAGTGGAGATCTTAACCCAAAGAAGAAGATCAAACGTTTGGAGGATGAAGAGAGAATTGACTGA
Protein sequence
MVKLLLTYNVDIKSKNLKGFSAVDILRQNEFLGDKELEEKLDDEHNIIVKQLRLAKILLKWTLWFIKRLAITDHREIVDMSKEDRNAILVVSVLIATATYQAVLSPPDKEKIELIYMSYNCRYFTYILFKYFNTLAFVASMIEICLHLPSGIRYTLHLVLPLVNCYILLMLFWLSCYTGVLTTGAVIVFILTKIPALRQKISGDLNPKKKIKRLEDEERID
Homology
BLAST of Bhi05G000411 vs. TAIR 10
Match:
AT5G54620.1 (Ankyrin repeat family protein )
HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 52/172 (30.23%), Postives = 89/172 (51.74%), Query Frame = 0
Query: 6 LTYNVDIKSKNLKGFSAVDILRQNEF---LGDKELEEKLDDEHNIIVKQLRLAKILLKWT 65
++ N DI++K G +A+DILR N + +++ + + + +++ A + L+
Sbjct: 208 ISLNRDIQNKG--GMTALDILRTNGSHMNIKTEKIIRHSGGKSGVSLSKVKTASVFLRSP 267
Query: 66 LWFIKRLAITDHREIVDMSKEDRNAILVVSVLIATATYQAVLSPPDKEKIELIYMSYNCR 125
+ F++ + T R MS RNA+LV++ LI TATYQ + P DK++I Y
Sbjct: 268 ITFVEYCSTTMTRYKNRMSDGTRNALLVITALIITATYQTAVQPQDKDEI-----YYTGN 327
Query: 126 YFTYILFKY-FNTLAFVASMIEICLHLPSGIRYT---LHLVLPLVNCYILLM 171
+LF + FNT+AF ++ + LP G Y + + +PLV Y L M
Sbjct: 328 IMINVLFVWGFNTIAFCLAIALTFILLPVGKAYNWWYIFISVPLVCSYALSM 372
BLAST of Bhi05G000411 vs. TAIR 10
Match:
AT4G11000.1 (Ankyrin repeat family protein )
HSP 1 Score: 48.9 bits (115), Expect = 6.1e-06
Identity = 44/116 (37.93%), Postives = 63/116 (54.31%), Query Frame = 0
Query: 2 VKLLLTYNVDIKSKNLKGFSAVDILRQNE---FLGDKEL-----EEKLDDEHNIIVKQL- 61
V LL V +K+KNL G +A+DIL+ ++ F K+L E + L
Sbjct: 160 VMKLLRKTVKVKAKNLDGKTAMDILQTHQSPCFPVAKKLLRSAKERPFCGSTTTLAGYLS 219
Query: 62 -RLAKILLKWTLWFIKRLAITDHREIVDMSKEDRNAILVVSVLIATATYQAVLSPP 108
L+ I + +L + L++T R I + + RNAILVV++LI TATYQA LSPP
Sbjct: 220 RNLSFIEKRNSLLGLSNLSMTKDRSI--NASDPRNAILVVAILIVTATYQAGLSPP 273
BLAST of Bhi05G000411 vs. TAIR 10
Match:
AT5G54610.1 (ankyrin )
HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04
Identity = 55/205 (26.83%), Postives = 94/205 (45.85%), Query Frame = 0
Query: 3 KLLLTYNVDIKSKNLKGFSAVDILRQNEFLGDKELEEKLDDEHNIIVKQLRLAKILLKWT 62
+L+ ++D +N G +A+D+LR +KE+EE + K + +W
Sbjct: 201 QLVKCLSLDRNIQNKSGMTALDVLRARGSHMNKEIEEIIQMSGG---KTGGSLSGIQEWY 260
Query: 63 LWFIKRLAITDH------REIVDMSKEDRNAILVVSVLIATATYQAVLSPPDKEKIELIY 122
++ + + +H R +S RNA+LV++ LI +AT+Q DKEK++ +
Sbjct: 261 IFLREPVTFKEHCKTRIARYRSRISDGSRNALLVIAALIISATFQTAAQLLDKEKLDKV- 320
Query: 123 MSYNCRYFTYILFKYFNTLAFVASMIEICLHLPSGIRYT---LHLVLPLVNCYILLM--- 182
N F+ NT+AF +++ + LP G Y + +PLV Y LLM
Sbjct: 321 -KKNGMRFSEFQLWGCNTVAFSIAILFSFILLPVGRAYEWWYFIITVPLVFSYFLLMYMM 380
Query: 183 ----LFWLSCYTGVLTTGAVIVFIL 192
F+L Y G G +V++L
Sbjct: 381 HGLSFFFLIIYEG----GLFLVYLL 396
BLAST of Bhi05G000411 vs. ExPASy TrEMBL
Match:
A0A6J1IAU0 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111471791 PE=4 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 1.1e-44
Identity = 115/212 (54.25%), Postives = 146/212 (68.87%), Query Frame = 0
Query: 1 MVKLLLTYNVDIKSKNLKGFSAVDILRQNEFLGDKELEEKLDDEHNIIVKQLRLAKILLK 60
MVKLL+ VD+K+KNL+G +A+DI+++ + DKE++E L H + + ILL
Sbjct: 193 MVKLLIN-KVDMKAKNLEGKTALDIMKERGLVEDKEVKEMLHGSHILRDVAKFVCSILL- 252
Query: 61 WTLWFIKRLAITDHREIVDMSKEDRNAILVVSVLIATATYQAVLSPPDKEKIELIYMSYN 120
F+KRL ITDH EI+ MSK+DRNAILVVSVLIATATYQA LSPPD I L ++SY
Sbjct: 253 ----FVKRLVITDHHEILYMSKKDRNAILVVSVLIATATYQAALSPPD---IPLEWISYV 312
Query: 121 CRYFTYILFKYFNTLAFVASMIEICLHLPSGIRYTLHLVLPLVNCYILLMLFWLSCYTGV 180
C F+ NT+AFVASMIEIC+HLPSGI Y LHLVLPLV CY LL + W S + V
Sbjct: 313 C-------FQQLNTVAFVASMIEICVHLPSGIGYALHLVLPLVICYALLAIVWRSYFPLV 372
Query: 181 LTTGAVIVFILTKIPALRQKISGDLNPKKKIK 213
+T+ + + IL+KIP +RQK+ G PKK K
Sbjct: 373 ITSAVIFLLILSKIPLVRQKVKGGFKPKKPNK 388
BLAST of Bhi05G000411 vs. ExPASy TrEMBL
Match:
A0A6J1EUP0 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita moschata OX=3662 GN=LOC111438057 PE=4 SV=1)
HSP 1 Score: 189.1 bits (479), Expect = 2.0e-44
Identity = 113/211 (53.55%), Postives = 146/211 (69.19%), Query Frame = 0
Query: 1 MVKLLLTYNVDIKSKNLKGFSAVDILRQNEFLGDKELEEKLDDEHNI--IVKQLRLAKIL 60
MVKLL+ VD+K+KNL+G +A+DI++++ + DKE++E L H + I LR ++
Sbjct: 193 MVKLLIN-KVDMKAKNLEGKTALDIMKEHGLVEDKEVKEMLHGYHILKDIASFLRTISLI 252
Query: 61 LKWTLWFIKRLAITDHREIVDMSKEDRNAILVVSVLIATATYQAVLSPPDKEKIELIYMS 120
L KRL ITDHREI +SKEDRNAILVVSVLIATATYQA L+PP+K+ +
Sbjct: 253 L-------KRLVITDHREIHYISKEDRNAILVVSVLIATATYQAALTPPNKDG-DFFIRQ 312
Query: 121 YNCRYFTYILFKYFNTLAFVASMIEICLHLPSGIRYTLHLVLPLVNCYILLMLFWLSCYT 180
Y ++ TY F FNTLAFVAS IEICLHLPSGI Y LHLV+PLV CY LL + W S +
Sbjct: 313 Y--KWITYQFFVQFNTLAFVASAIEICLHLPSGIDYALHLVIPLVICYALLAIVWCSYLS 372
Query: 181 GVLTTGAVIVFILTKIPALRQKISGDLNPKK 210
++T + V IL+KIP +R+K+ GD PKK
Sbjct: 373 SIITIAIIFVLILSKIPLVRRKVKGDFKPKK 392
BLAST of Bhi05G000411 vs. ExPASy TrEMBL
Match:
A0A6J1I9U2 (uncharacterized protein LOC111470574 OS=Cucurbita maxima OX=3661 GN=LOC111470574 PE=4 SV=1)
HSP 1 Score: 184.9 bits (468), Expect = 3.7e-43
Identity = 109/212 (51.42%), Postives = 145/212 (68.40%), Query Frame = 0
Query: 1 MVKLLLTYNVDIKSKNLKGFSAVDILRQNEFLGDKELEEKLDDEHNIIVKQLRLAKILLK 60
MVKLL+ VD+K+KNL+G +A+DI+++ + DKE++E L H + + ILL
Sbjct: 1 MVKLLIN-KVDMKAKNLEGKTALDIMKERGLVEDKEVKEMLHGSHILRDVAKFVCSILL- 60
Query: 61 WTLWFIKRLAITDHREIVDMSKEDRNAILVVSVLIATATYQAVLSPPDKEKIELIYMSYN 120
F+KRL ITDH EI+ MSK+DRNAILVV VLIATATY+A LSPP+K+ +
Sbjct: 61 ----FVKRLVITDHPEILYMSKKDRNAILVVYVLIATATYEAALSPPEKD-----MDFFP 120
Query: 121 CRYFTYILFKYFNTLAFVASMIEICLHLPSGIRYTLHLVLPLVNCYILLMLFWLSCYTGV 180
+ +Y+ F+ NT+AFVASMIEIC+HLPSGI Y LHLVLPLV CY LL + W S + V
Sbjct: 121 PEWISYVCFQQLNTVAFVASMIEICVHLPSGIGYALHLVLPLVICYALLAIVWRSYFPLV 180
Query: 181 LTTGAVIVFILTKIPALRQKISGDLNPKKKIK 213
+T+ + + IL+KIP +RQK+ G PKK K
Sbjct: 181 ITSAVIFLLILSKIPLVRQKVKGGFKPKKPNK 201
BLAST of Bhi05G000411 vs. ExPASy TrEMBL
Match:
A0A6J1I885 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111470572 PE=4 SV=1)
HSP 1 Score: 184.9 bits (468), Expect = 3.7e-43
Identity = 109/212 (51.42%), Postives = 145/212 (68.40%), Query Frame = 0
Query: 1 MVKLLLTYNVDIKSKNLKGFSAVDILRQNEFLGDKELEEKLDDEHNIIVKQLRLAKILLK 60
MVKLL+ VD+K+KNL+G +A+DI+++ + DKE++E L H + + ILL
Sbjct: 193 MVKLLIN-KVDMKAKNLEGKTALDIMKERGLVEDKEVKEMLHGSHILRDVAKFVCSILL- 252
Query: 61 WTLWFIKRLAITDHREIVDMSKEDRNAILVVSVLIATATYQAVLSPPDKEKIELIYMSYN 120
F+KRL ITDH EI+ MSK+DRNAILVV VLIATATY+A LSPP+K+ +
Sbjct: 253 ----FVKRLVITDHPEILYMSKKDRNAILVVYVLIATATYEAALSPPEKD-----MDFFP 312
Query: 121 CRYFTYILFKYFNTLAFVASMIEICLHLPSGIRYTLHLVLPLVNCYILLMLFWLSCYTGV 180
+ +Y+ F+ NT+AFVASMIEIC+HLPSGI Y LHLVLPLV CY LL + W S + V
Sbjct: 313 PEWISYVCFQQLNTVAFVASMIEICVHLPSGIGYALHLVLPLVICYALLAIVWRSYFPLV 372
Query: 181 LTTGAVIVFILTKIPALRQKISGDLNPKKKIK 213
+T+ + + IL+KIP +RQK+ G PKK K
Sbjct: 373 ITSAVIFLLILSKIPLVRQKVKGGFKPKKPNK 393
BLAST of Bhi05G000411 vs. ExPASy TrEMBL
Match:
A0A6J1I3B1 (ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC111470613 PE=4 SV=1)
HSP 1 Score: 184.9 bits (468), Expect = 3.7e-43
Identity = 110/209 (52.63%), Postives = 144/209 (68.90%), Query Frame = 0
Query: 1 MVKLLLTYNVDIKSKNLKGFSAVDILRQNEFLGDKELEEKLDDEHNIIVKQLRLAKILLK 60
MVKLL+ VD+K KNL+G +A+DI++++ + DKE++E L H I+K + L+
Sbjct: 193 MVKLLIN-KVDMKEKNLEGKTALDIMKEHGHVEDKEVKEMLHGSH--ILKDV---ATFLR 252
Query: 61 WTLWFIKRLAITDHREIVDMSKEDRNAILVVSVLIATATYQAVLSPPDKEKIELIYMSYN 120
++RL ITDHREI +SKEDRNAILVVSVLIATATYQA L+PP+K+ + Y
Sbjct: 253 TISLILRRLVITDHREIHYISKEDRNAILVVSVLIATATYQAALTPPNKDG-DFFIRQY- 312
Query: 121 CRYFTYILFKYFNTLAFVASMIEICLHLPSGIRYTLHLVLPLVNCYILLMLFWLSCYTGV 180
++ TY F FNTLAFVAS IEICLHLP GI Y LHLV+PLV CY LL + W S + +
Sbjct: 313 -KWITYQFFVQFNTLAFVASAIEICLHLPFGIDYALHLVIPLVICYALLAIVWCSYLSAI 372
Query: 181 LTTGAVIVFILTKIPALRQKISGDLNPKK 210
+T + V IL+KIP +R+K+ GD PKK
Sbjct: 373 ITIAIIFVLILSKIPLVRRKVKGDFKPKK 392
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1IAU0 | 1.1e-44 | 54.25 | ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1EUP0 | 2.0e-44 | 53.55 | ankyrin repeat-containing protein BDA1-like OS=Cucurbita moschata OX=3662 GN=LOC... | [more] |
A0A6J1I9U2 | 3.7e-43 | 51.42 | uncharacterized protein LOC111470574 OS=Cucurbita maxima OX=3661 GN=LOC111470574... | [more] |
A0A6J1I885 | 3.7e-43 | 51.42 | ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |
A0A6J1I3B1 | 3.7e-43 | 52.63 | ankyrin repeat-containing protein BDA1-like OS=Cucurbita maxima OX=3661 GN=LOC11... | [more] |