Bhi05G000328 (gene) Wax gourd (B227) v1

Overview
NameBhi05G000328
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionglycine-rich cell wall structural protein 1.8-like isoform X50
Locationchr5: 10543616 .. 10544326 (-)
RNA-Seq ExpressionBhi05G000328
SyntenyBhi05G000328
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGCAAATGGCTTCTTATAAACTTTCTTCTCTTGTTTTCTTACTTTTATTTGGTATTGAGATTTCTATTGCAACGAGAGCACTCACAACCTATAGTCAAGGAGAATATGGTAATCCAAGTACCTACAGTAATGGTGGGTATAATTATGTAGGAGAAAATGGTGTTGGGCGATATGCTGGTGGATATACTCCTAAGGGTTATGGATATGGAAAATATAAGAATGATTATTATTCAGGTCGAGAAAAGTACGGTCAGGGCACTACTAGTTTTGGTTATGGTGTTTCTGGATACGACACTGGAAAAAGTAAAGGGAATGATGATGATTACAGTGAACAATATGGACAAGGCTATGGCGATGGTGGAGGAAAACGTGGAGGATCATTCAATGAGTATAATAGTTATGCAAGTGGTTGTAAAGATGGAGGAGTAAATAACTATCCTAGCTATGGATATGATGAGAAGGGTGGAGAGATGTCCAAAGAATACAATGATAATAGATATGGTGGCAAAAGTGGAGAAATGTATGAATATCCGAATTATGGAGCTGGTAACAAAGGTGACAAATCATACAAAGAATATGGTGGTCGTCAAGGAAGCAGTGCATATGATGGAGATAGTGGCACCAAACCTTGAGAAACACCTACTTAATATTAATTACCATATATCTATACACAATAATAAATAAATAAATAAATAAATAAATAAAAAGAGA

mRNA sequence

TGCAAATGGCTTCTTATAAACTTTCTTCTCTTGTTTTCTTACTTTTATTTGGTATTGAGATTTCTATTGCAACGAGAGCACTCACAACCTATAGTCAAGGAGAATATGGTAATCCAAGTACCTACAGTAATGGTGGGTATAATTATGTAGGAGAAAATGGTGTTGGGCGATATGCTGGTGGATATACTCCTAAGGGTTATGGATATGGAAAATATAAGAATGATTATTATTCAGGTCGAGAAAAGTACGGTCAGGGCACTACTAGTTTTGGTTATGGTGTTTCTGGATACGACACTGGAAAAAGTAAAGGGAATGATGATGATTACAGTGAACAATATGGACAAGGCTATGGCGATGGTGGAGGAAAACGTGGAGGATCATTCAATGAGTATAATAGTTATGCAAGTGGTTGTAAAGATGGAGGAGTAAATAACTATCCTAGCTATGGATATGATGAGAAGGGTGGAGAGATGTCCAAAGAATACAATGATAATAGATATGGTGGCAAAAGTGGAGAAATGTATGAATATCCGAATTATGGAGCTGGTAACAAAGGTGACAAATCATACAAAGAATATGGTGGTCGTCAAGGAAGCAGTGCATATGATGGAGATAGTGGCACCAAACCTTGAGAAACACCTACTTAATATTAATTACCATATATCTATACACAATAATAAATAAATAAATAAATAAATAAATAAAAAGAGA

Coding sequence (CDS)

CAAATGGCTTCTTATAAACTTTCTTCTCTTGTTTTCTTACTTTTATTTGGTATTGAGATTTCTATTGCAACGAGAGCACTCACAACCTATAGTCAAGGAGAATATGGTAATCCAAGTACCTACAGTAATGGTGGGTATAATTATGTAGGAGAAAATGGTGTTGGGCGATATGCTGGTGGATATACTCCTAAGGGTTATGGATATGGAAAATATAAGAATGATTATTATTCAGGTCGAGAAAAGTACGGTCAGGGCACTACTAGTTTTGGTTATGGTGTTTCTGGATACGACACTGGAAAAAGTAAAGGGAATGATGATGATTACAGTGAACAATATGGACAAGGCTATGGCGATGGTGGAGGAAAACGTGGAGGATCATTCAATGAGTATAATAGTTATGCAAGTGGTTGTAAAGATGGAGGAGTAAATAACTATCCTAGCTATGGATATGATGAGAAGGGTGGAGAGATGTCCAAAGAATACAATGATAATAGATATGGTGGCAAAAGTGGAGAAATGTATGAATATCCGAATTATGGAGCTGGTAACAAAGGTGACAAATCATACAAAGAATATGGTGGTCGTCAAGGAAGCAGTGCATATGATGGAGATAGTGGCACCAAACCTTGA

Protein sequence

QMASYKLSSLVFLLLFGIEISIATRALTTYSQGEYGNPSTYSNGGYNYVGENGVGRYAGGYTPKGYGYGKYKNDYYSGREKYGQGTTSFGYGVSGYDTGKSKGNDDDYSEQYGQGYGDGGGKRGGSFNEYNSYASGCKDGGVNNYPSYGYDEKGGEMSKEYNDNRYGGKSGEMYEYPNYGAGNKGDKSYKEYGGRQGSSAYDGDSGTKP
Homology
BLAST of Bhi05G000328 vs. ExPASy TrEMBL
Match: A0A6J1HL49 (glycine-rich cell wall structural protein 1.8-like isoform X50 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-09
Identity = 88/225 (39.11%), Postives = 107/225 (47.56%), Query Frame = 0

Query: 1   QMASYKLSSLVFLLLFGIEISIATRALTTYSQGEYGNPSTYSNGGYNYVGENGVGRYAGG 60
           QMAS+KLSSLVF L FGI I  A R L++  +G YG+ S +    Y  VGE GV  Y  G
Sbjct: 2   QMASHKLSSLVFFLFFGIGICSAARRLSSSYEG-YGSSSGHGYSSYASVGEYGVENYGNG 61

Query: 61  YTPKG-YG--YGKYKNDYYSG-----REKYGQGTTSFGYGVSGYDTGKSKGNDDDYSEQY 120
           Y   G YG  YG+Y    Y G      E+Y  G     YG  GY  G+ +G D    E Y
Sbjct: 62  YGKDGAYGGKYGEYNGGKYGGYDGGKHERYDSG----NYG--GYSGGRHEGYD---GENY 121

Query: 121 GQGYGDG--GGKRGGSFNEYNSYASGCKDGGVNNYPSYG---YDEKGGEMSKEYNDNRYG 180
           G GYG G  GG  GG   EY+       DGG  NY  Y    ++E   +  + Y+  +YG
Sbjct: 122 G-GYGGGNYGGYGGGKHEEYDKDKHEGYDGG--NYGGYSGGKHEEYDKDKHEGYDGGKYG 181

Query: 181 GKSGEMYE------YPNYGAGNKGDKSYKEYGG--RQGSSAYDGD 205
           G  G  +E      +  Y  GN G  S   YGG  R     YD D
Sbjct: 182 GYGGSKHEEYDKDKHEGYDGGNYGGYSGGNYGGYSRSKHEEYDKD 213

BLAST of Bhi05G000328 vs. ExPASy TrEMBL
Match: A0A6J1HL43 (glycine-rich cell wall structural protein 1.8-like isoform X45 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.3e-08
Identity = 87/229 (37.99%), Postives = 107/229 (46.72%), Query Frame = 0

Query: 1   QMASYKLSSLVFLLLFGIEISIATRALTTYSQGEYGNPSTYSNGGYNYVGENGVGRYAGG 60
           QMAS+KLSSLVF L FGI I  A R L++  +G YG+ S +    Y  VGE GV  Y  G
Sbjct: 2   QMASHKLSSLVFFLFFGIGICSAARRLSSSYEG-YGSSSGHGYSSYASVGEYGVENYGNG 61

Query: 61  YTPKG-YG--YGKYKNDYYSG-----REKYGQGTTSFGYGVSGYDTGKSKGNDDDYSEQY 120
           Y   G YG  YG+Y    Y G      E+Y  G     YG  GY  G+ +G D +    Y
Sbjct: 62  YGKDGAYGGKYGEYNGGKYGGYDGGKHERYDSG----NYG--GYSGGRHEGYDGENYGGY 121

Query: 121 GQG----YGDG--GGKRGGSFNEYNSYASGCKDGGVNNYPSYG---YDEKGGEMSKEYND 180
           G G    YG G  GG  GG   EY+       DGG  NY  Y    ++E   +  + Y+ 
Sbjct: 122 GGGKHEEYGGGNYGGYGGGKHEEYDKDKHEGYDGG--NYGGYSGGKHEEYDKDKHEGYDG 181

Query: 181 NRYGGKSGEMYE------YPNYGAGNKGDKSYKEYGG--RQGSSAYDGD 205
            +YGG  G  +E      +  Y  GN G  S   YGG  R     YD D
Sbjct: 182 GKYGGYGGSKHEEYDKDKHEGYDGGNYGGYSGGNYGGYSRSKHEEYDKD 221

BLAST of Bhi05G000328 vs. ExPASy TrEMBL
Match: A0A6J1HIT5 (glycine-rich cell wall structural protein 1.8-like isoform X44 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-08
Identity = 86/229 (37.55%), Postives = 107/229 (46.72%), Query Frame = 0

Query: 1   QMASYKLSSLVFLLLFGIEISIATRALTTYSQGEYGNPSTYSNGGYNYVGENGVGRYAGG 60
           QMAS+KLSSLVF L FGI I  A R L++  +G YG+ S +    Y  VGE GV  Y  G
Sbjct: 2   QMASHKLSSLVFFLFFGIGICSAARRLSSSYEG-YGSSSGHGYSSYASVGEYGVENYGNG 61

Query: 61  YTPKG-YG--YGKYKNDYYSG-----REKYGQGTTSFGYGVSGYDTGKSKGNDDDYSEQY 120
           Y   G YG  YG+Y    Y G      E+Y  G     YG  GY  G+ +G D +    Y
Sbjct: 62  YGKDGAYGGKYGEYNGGKYGGYDGGKHERYDSG----NYG--GYSGGRHEGYDGENYGGY 121

Query: 121 G----QGYGDG--GGKRGGSFNEYNSYASGCKDGGVNNYPSYG---YDEKGGEMSKEYND 180
           G    +GY  G  GG  GG   EY+       DGG  NY  Y    ++E   +  + Y+ 
Sbjct: 122 GGDKHEGYNGGNYGGYGGGKHEEYDKDKHEGYDGG--NYGGYSGGKHEEYDKDKHEGYDG 181

Query: 181 NRYGGKSGEMYE------YPNYGAGNKGDKSYKEYGG--RQGSSAYDGD 205
            +YGG  G  +E      +  Y  GN G  S   YGG  R     YD D
Sbjct: 182 GKYGGYGGSKHEEYDKDKHEGYDGGNYGGYSGGNYGGYSRSKHEEYDKD 221

BLAST of Bhi05G000328 vs. ExPASy TrEMBL
Match: A0A5A7T532 (Keratin, type I cytoskeletal 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G001010 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 2.8e-08
Identity = 81/210 (38.57%), Postives = 103/210 (49.05%), Query Frame = 0

Query: 2   MASYKLS-SLVFLLLFGIEISIATRALTTYSQGE-YGNPSTYSNGGYNYVGENGVGRYAG 61
           MAS +LS SLVF +LF IEIS+        S+GE YGNPS +    Y ++G+NG+G    
Sbjct: 1   MASPRLSFSLVFFILFAIEISLIA------SEGEKYGNPSNFGYRKYGFIGKNGLG---- 60

Query: 62  GYTPKGYGYGKYKNDYYSGR-EKYGQGTTSFGYGVSGYDTGKSKGNDDDYSEQYGQGYGD 121
                GY    Y NDYY GR  K  QG+T  G G SG   G S   DD  S       G 
Sbjct: 61  -----GYAEKNYNNDYYWGRWRKSDQGSTYSGNGASG---GSSNEYDDHTSSCKSPSNGS 120

Query: 122 GGGKRGGSFNEYNSYASGCKDGGVNNYPSYGYDEK--GGEMSKEYNDNRYGGKSGEMYEY 181
           G      S   Y +  +G K+ G  N PS G +    GGE SK Y+ +   GKSG  Y  
Sbjct: 121 GYKSEEPSKENYGNANNG-KNAGEYNNPSTGGNSNNGGGEASKGYSGSEGNGKSGGEYSN 180

Query: 182 PNYG--AGNKGDKSYKEYGGRQGSSAYDGD 205
           P+ G    N G ++ K Y G +G+    G+
Sbjct: 181 PSTGGNGNNGGGEASKGYSGSEGNGKSGGE 191

BLAST of Bhi05G000328 vs. ExPASy TrEMBL
Match: A0A6J1HGY2 (glycine-rich cell wall structural protein 1.8-like isoform X47 OS=Cucurbita moschata OX=3662 GN=LOC111463951 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 3.6e-08
Identity = 85/231 (36.80%), Postives = 105/231 (45.45%), Query Frame = 0

Query: 1   QMASYKLSSLVFLLLFGIEISIATRALTTYSQGEYGNPSTYSNGGYNYVGENGVGRYAGG 60
           QMAS+KLSSLVF L FGI I  A R L++  +G YG+ S +    Y  VGE GV  Y  G
Sbjct: 2   QMASHKLSSLVFFLFFGIGICSAARRLSSSYEG-YGSSSGHGYSSYASVGEYGVENYGNG 61

Query: 61  YTPKG-YG--YGKYKNDYYSG-----REKYGQGTTSFGYGVSGYDTGKSKGNDDDYSEQY 120
           Y   G YG  YG+Y    Y G      E+Y  G     YG  GY  G+ +G D    E Y
Sbjct: 62  YGKDGAYGGKYGEYNGGKYGGYDGGKHERYDSG----NYG--GYSGGRHEGYD---GENY 121

Query: 121 GQGYGDG--GGKRGGSFNEYN---------SYASGCKDGGVNNYPSYGYDEKGGEMSKEY 180
           G GYG G  GG  GG + EY+             G   G    Y    ++E   +  + Y
Sbjct: 122 G-GYGGGNYGGYGGGKYEEYDRGKHEEYDKDKHEGYDGGNYGGYSGGKHEEYDKDKHEGY 181

Query: 181 NDNRYGGKSGEMYE------YPNYGAGNKGDKSYKEYGG--RQGSSAYDGD 205
           +  +YGG  G  +E      +  Y  GN G  S   YGG  R     YD D
Sbjct: 182 DGGKYGGYGGSKHEEYDKDKHEGYDGGNYGGYSGGNYGGYSRSKHEEYDKD 221

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HL493.3e-0939.11glycine-rich cell wall structural protein 1.8-like isoform X50 OS=Cucurbita mosc... [more]
A0A6J1HL431.3e-0837.99glycine-rich cell wall structural protein 1.8-like isoform X45 OS=Cucurbita mosc... [more]
A0A6J1HIT52.1e-0837.55glycine-rich cell wall structural protein 1.8-like isoform X44 OS=Cucurbita mosc... [more]
A0A5A7T5322.8e-0838.57Keratin, type I cytoskeletal 9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A6J1HGY23.6e-0836.80glycine-rich cell wall structural protein 1.8-like isoform X47 OS=Cucurbita mosc... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 152..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..121

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000328Bhi05M000328mRNA