Bhi05G000178 (gene) Wax gourd (B227) v1

Overview
NameBhi05G000178
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionPhosphoribosylaminoimidazole carboxylase atpase-subunit isoform 1
Locationchr5: 4930834 .. 4931520 (-)
RNA-Seq ExpressionBhi05G000178
SyntenyBhi05G000178
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATTCTCATTTCTCTTTATACAAACTTCAACTACTTTTTGTGAGAAAAAAAGAACCAAAAAGAAAAAGAGAGAAAAAGTTGGTATAATTTGTATTGAAATTAAAAAGATGGGTATCTCTCAAAGGGATTGCTTTGTTTTCAATGTGTTGTTGTTATCCTTCACCATTTTATTAGCTTCTTCACAAGTTATGGAGGCAGCTAGGGTTATGAAAGGAGAGAAATGGATGGAGAAGGAAGATCATGATACTCATCGGCTTTTTGCGTTGCCTATTATTCAAGTCTTGCAACGTGCACCGGTGCCACCGTCCGGTCGCAATCCGTGCACCAACATTCCCGGCCAAAGCAACGGTCGATGCACTCTCCAGACGATGAATGTTGCTGGTCAGGCTCATTTCGTCCATGCACCGCCTGCTATCCCCGACTTCGCTCTCGACATTGTCTCCGCTGCTCAAAGCTCTTGATGTTTGTTTGACGATGATGGTATAGAACCATAGAGGCTGTGATCACTTGCTTGAAACTGAAAATTCTTTTTTATTAGTTTTTTTTTAGTAATTTTTTTTTGGCTTGGGGGCATAAAAAAAGATGCAACCCATGTAATTTATGTTACGTTTGGTAATAGTTTGTATACATCAAGTCCTTTGATGGACAGTGTTACTAAATAAGAAAGATTAGTTTATTCGTTGAAA

mRNA sequence

TCATTCTCATTTCTCTTTATACAAACTTCAACTACTTTTTGTGAGAAAAAAAGAACCAAAAAGAAAAAGAGAGAAAAAGTTGGTATAATTTGTATTGAAATTAAAAAGATGGGTATCTCTCAAAGGGATTGCTTTGTTTTCAATGTGTTGTTGTTATCCTTCACCATTTTATTAGCTTCTTCACAAGTTATGGAGGCAGCTAGGGTTATGAAAGGAGAGAAATGGATGGAGAAGGAAGATCATGATACTCATCGGCTTTTTGCGTTGCCTATTATTCAAGTCTTGCAACGTGCACCGGTGCCACCGTCCGGTCGCAATCCGTGCACCAACATTCCCGGCCAAAGCAACGGTCGATGCACTCTCCAGACGATGAATGTTGCTGGTCAGGCTCATTTCGTCCATGCACCGCCTGCTATCCCCGACTTCGCTCTCGACATTGTCTCCGCTGCTCAAAGCTCTTGATGTTTGTTTGACGATGATGGTATAGAACCATAGAGGCTGTGATCACTTGCTTGAAACTGAAAATTCTTTTTTATTAGTTTTTTTTTAGTAATTTTTTTTTGGCTTGGGGGCATAAAAAAAGATGCAACCCATGTAATTTATGTTACGTTTGGTAATAGTTTGTATACATCAAGTCCTTTGATGGACAGTGTTACTAAATAAGAAAGATTAGTTTATTCGTTGAAA

Coding sequence (CDS)

ATGGGTATCTCTCAAAGGGATTGCTTTGTTTTCAATGTGTTGTTGTTATCCTTCACCATTTTATTAGCTTCTTCACAAGTTATGGAGGCAGCTAGGGTTATGAAAGGAGAGAAATGGATGGAGAAGGAAGATCATGATACTCATCGGCTTTTTGCGTTGCCTATTATTCAAGTCTTGCAACGTGCACCGGTGCCACCGTCCGGTCGCAATCCGTGCACCAACATTCCCGGCCAAAGCAACGGTCGATGCACTCTCCAGACGATGAATGTTGCTGGTCAGGCTCATTTCGTCCATGCACCGCCTGCTATCCCCGACTTCGCTCTCGACATTGTCTCCGCTGCTCAAAGCTCTTGA

Protein sequence

MGISQRDCFVFNVLLLSFTILLASSQVMEAARVMKGEKWMEKEDHDTHRLFALPIIQVLQRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAGQAHFVHAPPAIPDFALDIVSAAQSS
Homology
BLAST of Bhi05G000178 vs. ExPASy TrEMBL
Match: A0A0A0LCX8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391390 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.8e-34
Identity = 85/118 (72.03%), Postives = 95/118 (80.51%), Query Frame = 0

Query: 1   MGISQRDCFVFNVLLLSFTILLASSQVMEAARVMKGEKWMEKEDHDTHRLFALPIIQVLQ 60
           MGISQ++      +LL F IL+ASSQVM  ARVMK EKWM++E +D H +F LPIIQVLQ
Sbjct: 1   MGISQKN------VLLFFIILVASSQVMVGARVMKVEKWMKEEKND-HSVFVLPIIQVLQ 60

Query: 61  RAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAGQAHFVHA-PPAIPDFALDIVSAAQSS 118
           RAPVPPSGRNPCT IPGQSNGRCTLQTMNVAG  HFVHA PP IPD AL++ S AQSS
Sbjct: 61  RAPVPPSGRNPCTGIPGQSNGRCTLQTMNVAGH-HFVHARPPPIPDSALNVDSTAQSS 110

BLAST of Bhi05G000178 vs. ExPASy TrEMBL
Match: A0A6J1K3A7 (uncharacterized protein LOC111491306 OS=Cucurbita maxima OX=3661 GN=LOC111491306 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.8e-26
Identity = 82/119 (68.91%), Postives = 88/119 (73.95%), Query Frame = 0

Query: 1   MGISQRDCFVFNVLLLSFTILLASSQVMEAARVMKGEKWME-KEDHDTHRLFALPIIQVL 60
           MG+S+R   VF VLL  FTILL +   MEAARVM GEKWM+ K+D      F LP IQVL
Sbjct: 1   MGMSKRVSLVFFVLL--FTILLPNP--MEAARVMSGEKWMKAKQD----MAFVLP-IQVL 60

Query: 61  QRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVA-GQAHFVHAPPAIPDFALDIVSAAQSS 118
           QRAPVPPSGRNPC+ IPGQSNGRCTLQTMNVA G   FV APPAI D A  I SAAQSS
Sbjct: 61  QRAPVPPSGRNPCSTIPGQSNGRCTLQTMNVAGGPGRFVQAPPAIHDPA-PIASAAQSS 109

BLAST of Bhi05G000178 vs. ExPASy TrEMBL
Match: A0A6J1ET04 (uncharacterized protein LOC111437447 OS=Cucurbita moschata OX=3662 GN=LOC111437447 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24
Identity = 80/119 (67.23%), Postives = 87/119 (73.11%), Query Frame = 0

Query: 1   MGISQRDCFVFNVLLLSFTILLASSQVMEAARVMKGEKWME-KEDHDTHRLFALPIIQVL 60
           MG+S+R   VF VL+L  TILL +   MEAARVM G KWM+ K+D      F LP IQVL
Sbjct: 1   MGMSKRVSLVFFVLML--TILLPNP--MEAARVMSGHKWMKAKQD----IAFVLP-IQVL 60

Query: 61  QRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVA-GQAHFVHAPPAIPDFALDIVSAAQSS 118
           QRAPVPPSGRNPC+ IPGQSNGRCTLQTMNVA G   FV APPAI D A  I SAAQSS
Sbjct: 61  QRAPVPPSGRNPCSTIPGQSNGRCTLQTMNVAGGPGRFVQAPPAIHDPA-PIASAAQSS 109

BLAST of Bhi05G000178 vs. ExPASy TrEMBL
Match: A0A5C7I2P2 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010777 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13
Identity = 50/112 (44.64%), Postives = 68/112 (60.71%), Query Frame = 0

Query: 3   ISQRDCFVFN--VLLLSFTILLAS--SQVMEAARVMKGEKWMEKEDHDTHRLFALPIIQV 62
           +S R  F+F+  VL++  T+L+AS     + A R ++G++W  KED   +RL      Q 
Sbjct: 2   VSHRKSFLFSTVVLIIFMTLLMASHDQHFVAATRPLEGDQWTNKED---NRL----AFQS 61

Query: 63  LQRAPVPPSGRNPCTNIPGQSNGRCTLQTMNVAGQAHFVHAPPAIPDFALDI 111
           LQ+ P+PPSGRNPC+NIPGQ +G CTL   N AG       PPA P F +DI
Sbjct: 62  LQQGPLPPSGRNPCSNIPGQGSGVCTLNGKNFAG-GRVALEPPAFPSFVMDI 105

BLAST of Bhi05G000178 vs. ExPASy TrEMBL
Match: B9I5L3 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G043600 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.0e-12
Identity = 47/114 (41.23%), Postives = 67/114 (58.77%), Query Frame = 0

Query: 4   SQRDCFVFNVLLLSFTILLASSQVMEAARVMKGEKWMEKEDHDTHRLFALPIIQVLQRAP 63
           SQR      V++    +L + SQ + AAR ++GE+W EK          +  IQ LQR P
Sbjct: 3   SQRRNQCLTVMIFVTIVLGSCSQQVLAARPLEGERWSEK---------IVGNIQSLQRGP 62

Query: 64  VPPSGRNPCTNIPGQSNGRCTLQTMNVAGQAHFVHAPPAIPDFALDIVSAAQSS 118
           VPPSG +PCT+IPG+ +G+C+L  MN AG      APPA PD  ++  +AA ++
Sbjct: 63  VPPSGGSPCTHIPGRGSGKCSLGEMNFAGHT-VALAPPAFPDAIMNFGAAASTT 106

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LCX82.8e-3472.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G391390 PE=4 SV=1[more]
A0A6J1K3A74.8e-2668.91uncharacterized protein LOC111491306 OS=Cucurbita maxima OX=3661 GN=LOC111491306... [more]
A0A6J1ET041.2e-2467.23uncharacterized protein LOC111437447 OS=Cucurbita moschata OX=3662 GN=LOC1114374... [more]
A0A5C7I2P21.2e-1344.64Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_010777 PE=4 SV=1[more]
B9I5L34.0e-1241.23Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G043600 PE=4 ... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33592FAMILY NOT NAMEDcoord: 1..115
NoneNo IPR availablePANTHERPTHR33592:SF5TRANSMEMBRANE PROTEINcoord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000178Bhi05M000178mRNA