Bhi05G000176 (gene) Wax gourd (B227) v1

Overview
NameBhi05G000176
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr5: 4845657 .. 4845956 (+)
RNA-Seq ExpressionBhi05G000176
SyntenyBhi05G000176
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATCCAATTTGCTTTCTTTTTAGCCATTTTGGTTCTTCTTGCCAACGCTCATCAGCTCCAAAGTTGCAGAACCATGAAAGAAGATCGACAAAAGTGGTCGACCGAGCTACTTCTTCAGCAGTCGTTGCAGAGGGCGCCGGTCCCTCCCTCGGCCAGAAATGGCGGCACAAATATCCCAGTACCGGTCGGGCAAAGGGCATTTTCAGGAAAATCTCCGGCGGCGCCGGCACACAGCTACAATATAATTGATCATGTACCGGTTCCTTTTGGCGTGGCCATGAAGACAAACCAATAA

mRNA sequence

ATGAAGATCCAATTTGCTTTCTTTTTAGCCATTTTGGTTCTTCTTGCCAACGCTCATCAGCTCCAAAGTTGCAGAACCATGAAAGAAGATCGACAAAAGTGGTCGACCGAGCTACTTCTTCAGCAGTCGTTGCAGAGGGCGCCGGTCCCTCCCTCGGCCAGAAATGGCGGCACAAATATCCCAGTACCGGTCGGGCAAAGGGCATTTTCAGGAAAATCTCCGGCGGCGCCGGCACACAGCTACAATATAATTGATCATGTACCGGTTCCTTTTGGCGTGGCCATGAAGACAAACCAATAA

Coding sequence (CDS)

ATGAAGATCCAATTTGCTTTCTTTTTAGCCATTTTGGTTCTTCTTGCCAACGCTCATCAGCTCCAAAGTTGCAGAACCATGAAAGAAGATCGACAAAAGTGGTCGACCGAGCTACTTCTTCAGCAGTCGTTGCAGAGGGCGCCGGTCCCTCCCTCGGCCAGAAATGGCGGCACAAATATCCCAGTACCGGTCGGGCAAAGGGCATTTTCAGGAAAATCTCCGGCGGCGCCGGCACACAGCTACAATATAATTGATCATGTACCGGTTCCTTTTGGCGTGGCCATGAAGACAAACCAATAA

Protein sequence

MKIQFAFFLAILVLLANAHQLQSCRTMKEDRQKWSTELLLQQSLQRAPVPPSARNGGTNIPVPVGQRAFSGKSPAAPAHSYNIIDHVPVPFGVAMKTNQ
Homology
[Close]
BLAST of Bhi05G000176 vs. ExPASy TrEMBL
Match: A0A5D3B777 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold63958G00010 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.8e-27
Identity = 68/98 (69.39%), Postives = 81/98 (82.65%), Query Frame = 0 

Query: 1  MKIQFAFFLAILVLLANAHQLQSCRTMKEDRQKWSTELLLQQSLQRAPVPPSARNGGTNI 60
          MKIQF FF AILVLLANAH LQSCRTMK+D++KWS  +L+QQSLQRAPVPPS R+G TNI
Sbjct: 1  MKIQFTFFFAILVLLANAHHLQSCRTMKDDQRKWS--MLIQQSLQRAPVPPSTRDGDTNI 60

Query: 61 PVPVGQRAFSGKSPAAPAHSYNIIDHVPVPFGVAMKTN 99
          PVP+GQ+AF+GKS   PA  +   D++ VP GVA+KTN
Sbjct: 61 PVPLGQQAFAGKSTVPPA--FPDPDNLEVPSGVALKTN 94

[Close]
BLAST of Bhi05G000176 vs. ExPASy TrEMBL
Match: A0A0A0LCY5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.7e-24
Identity = 62/83 (74.70%), Postives = 72/83 (86.75%), Query Frame = 0 

Query: 1  MKIQFAFFLAILVLLANAHQLQSCRTMKEDRQKWSTEL-LLQQSLQRAPVPPSARNGGTN 60
          MKIQF+F LAILVLLAN H LQSCRT+K+D+Q WS +L LLQQSLQR PVPPSA+NG TN
Sbjct: 1  MKIQFSFLLAILVLLANTHHLQSCRTIKDDQQNWSIDLQLLQQSLQRVPVPPSAKNGDTN 60

Query: 61 IPVPVGQRAFSGKSPAAPAHSYN 83
          IPVPVGQRAF+GK+ AA A +Y+
Sbjct: 61 IPVPVGQRAFAGKTSAALARNYS 83

The following BLAST results are available for this feature:
BLAST of Bhi05G000176 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi05G000176 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi05G000176 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3B7774.8e-2769.39Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LCY51.7e-2474.70Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G393150 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi05M000176Bhi05M000176mRNA