Bhi04G002074 (gene) Wax gourd (B227) v1

Overview


Name	Bhi04G002074
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Disease resistance protein (TIR-NBS-LRR class) family
Location	chr4: 68745581 .. 68747745 (-)
RNA-Seq Expression	Bhi04G002074
Synteny	Bhi04G002074

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAAGTGGTCTACACAACTTGCCCTCCTTGAGTGAACTTGACTTAAGTGGAAATAACTTTGAGACCTTACCTCAAACCATATTCTACAATCTTTCTAGTTTATCTACTCTAGAGTTGAGTCATTGCACAAGACTCCGTTCGTTACCGGAACTTCCACCCAACCTCCATACCTTGTTGGCAGATGAATGTACATCCCTAGAATCAATTATGAGCCTTAATCTTTGTTTGGAGGAACTGGTACAAGTCCTGCTGACAAAAAGTTAAAATTTGCCAATTGTTTGAAACTAAAGAAGGAAGGCAACATCTTGGAGTCCTTATTACAGGGGGTTCATCTTGTAGAAAAAGAAGGGCAGGAGTTATATGATATGGTAAGGTTCTCATCTTTCTCGAGTTTGCATAATTTATAGATGATCAATACAACATAACTAACTCGTTGCTCGAGTATTGTTTGCAGGGTATTTATCATGGCGGCCTAGGTCTTAAGGTGGGGGCGATGTATCCAGGGAGTGAAATTCCACAATGGTTTAGTAATAATCAAGCAGAGGGCAATACTGTAACCCTCCTGCTTCCTCAACATTGTATTGATAACTCTTTGGCGTTTGCTCTATGTCTTATTGTTTCTCAGAGTGAGGTGACACGGTTTTACATTCTGATGTTAGTGTTCACTTTCGATTGACATTCGACATGATAATGAGAATGCCGCCGAAGCAATTTCTGTTTCTTGAGTGGAGGACAGAGCTTGGTGTCCTTTAAAGAAGATCATGTTGTTTTTGGACTTGTATCCATGGTTCGCTACATTGTTGCAGATGCAATGATGGAACCTTGGCCTAGGAATTGCAATCACATTGAATGTTTCTTTAGGTTTGGCGGTGATTTGGACAACAGCTATGCCCCTGTAAAGGTGAAAAGGTGGTGCAGTTCGCTTGGTAAACGTGGAGGGAAAAACGCAACCTATTTTCCTTGGTTTTTTGGTTAGAATCGTTTTCTAAATTCCCACTTTAAAATCTCTCTTTAAACCCATCTACCGAGTACTCACTACCTCTTCACATCTTTAAACTTACATTTGTGTTTATCATTTTTACTTGCTTTGTATTTTCAGTTTCATCATTGCATGAATATTTAACACAACTTCTTAGCCATTGGACTGCATTAGTAGTCTATATCAATTAACAAGAAATCACGTTGTATGAGAATAATATCTAAGCTTCATTTATGTACTTTGGAAGTGAAATTTAGATATGGATGTTTTCTATTGGTTGTTAAGAGCATAAGTATATTAAAGATTGTATCCTCTTTCTTAATCTATTCTTTTTATGGCATTTTTCAGGAGGTTAGAGTCTGAAATGATTGAACAAATCACTCAAGAAAACAACCTACCTAAAAAACTAGACCGTTTAACATTAAATGATGTTGATGGTGTAGTTGGAATTGAAGATTGTGTGGTTTGTATTGAGTCTGGTCTACGAGATTCCAATGATGATGTTCGCATTTTAGGCATTTGAGGAACGGGTGGCATTGGTAAAACTACCATTCACTGCCACGCTCTGTTTTTATTTTAAATTCTGGTAAAAATGGACATGGACTACCAAAGTTACAAATGATGCTTCTATCTCAAGTTATGCAGGAACCACACCCTCAATGCATATTTCAAGAGCTTTCCTTAAAAATAGGTTGAGTGGAAAGAAGGTGCTCATTGTTCTTGATGATATTGATGACCATGACATAGAACAATTAGATAATTTAGTTGGAGGATGCAATTGGTTTGGAGTAGGAAGTAGAATTTTCATAACAACTAAAAACAGATGGGAGAATTTGGATAGACAGGAGGCCGATGATGGTATATTGAAGGCCCTTCTCTGGTTGCCAGAGTTGAAATGCTTTCTGTGAAAAACATGTATAACCCACCGGAATCTGAAGAATCTGGTGAAGAAAGTGAGAGCCAAGATGAGGTTTTGGACGACTCTTATTCTACTTCGAATGGAAATGAGTCAGTTGCCATAAAAGCTAGGGACGATGGAAAAGAGAGGAATATAGGCAGCGATAAAATAGACAGTGAAAATGATATTTCGAACAATGATTTGGGTGGGGGATATGGAGACTCGAGTGAGAATAGATGTGGCAATGGCAATAGAAGAAGTGAAAGTAGAGGCAAAATCTGGTGA

mRNA sequence

ATGCCAAGTGGTCTACACAACTTGCCCTCCTTGAGTGAACTTGACTTAAGTGGAAATAACTTTGAGACCTTACCTCAAACCATATTCTACAATCTTTCTAGTTTATCTACTCTAGAGTTGAGTCATTGCACAAGACTCCGTTCGTTACCGGAACTTCCACCCAACCTCCATACCTTGTTGGCAGATGAATGTACATCCCTAGAATCAATTATGAGCCTTAATCTTTGTTTGGAGGAACTGTTAAAATTTGCCAATTGTTTGAAACTAAAGAAGGAAGGCAACATCTTGGAGTCCTTATTACAGGGGGTTCATCTTGTAGAAAAAGAAGGGCAGGAGTTATATGATATGGGTATTTATCATGGCGGCCTAGGTCTTAAGGTGGGGGCGATGTATCCAGGGAGTGAAATTCCACAATGGTTTAGTAATAATCAAGCAGAGGGCAATACTGTAACCCTCCTGCTTCCTCAACATTGTATTGATAACTCTTTGGCGTTTGCTCTATGTCTTATTGTTTCTCAGAGTGAGAGCTTGGTGTCCTTTAAAGAAGATCATGTTGTTTTTGGACTTGTATCCATGGTTCGCTACATTGTTGCAGATGCAATGATGGAACCTTGGCCTAGGAATTGCAATCACATTGAATGTTTCTTTAGGTTTGGCGGTGATTTGGACAACAGCTATGCCCCTGTAAAGGTGAAAAGGAGGTTAGAGTCTGAAATGATTGAACAAATCACTCAAGAAAACAACCTACCTAAAAAACTAGACCGTTTAACATTAAATGATGTTGATGGTGTAGTTGGAATTGAAGATTGTGTGGTTTGTATTGAGTCTGGCCCTTCTCTGGTTGCCAGAGTTGAAATGCTTTCTGTGAAAAACATGTATAACCCACCGGAATCTGAAGAATCTGGTGAAGAAAGTGAGAGCCAAGATGAGGTTTTGGACGACTCTTATTCTACTTCGAATGGAAATGAGTCAGTTGCCATAAAAGCTAGGGACGATGGAAAAGAGAGGAATATAGGCAGCGATAAAATAGACAGTGAAAATGATATTTCGAACAATGATTTGGGTGGGGGATATGGAGACTCGAGTGAGAATAGATGTGGCAATGGCAATAGAAGAAGTGAAAGTAGAGGCAAAATCTGGTGA

Coding sequence (CDS)

ATGCCAAGTGGTCTACACAACTTGCCCTCCTTGAGTGAACTTGACTTAAGTGGAAATAACTTTGAGACCTTACCTCAAACCATATTCTACAATCTTTCTAGTTTATCTACTCTAGAGTTGAGTCATTGCACAAGACTCCGTTCGTTACCGGAACTTCCACCCAACCTCCATACCTTGTTGGCAGATGAATGTACATCCCTAGAATCAATTATGAGCCTTAATCTTTGTTTGGAGGAACTGTTAAAATTTGCCAATTGTTTGAAACTAAAGAAGGAAGGCAACATCTTGGAGTCCTTATTACAGGGGGTTCATCTTGTAGAAAAAGAAGGGCAGGAGTTATATGATATGGGTATTTATCATGGCGGCCTAGGTCTTAAGGTGGGGGCGATGTATCCAGGGAGTGAAATTCCACAATGGTTTAGTAATAATCAAGCAGAGGGCAATACTGTAACCCTCCTGCTTCCTCAACATTGTATTGATAACTCTTTGGCGTTTGCTCTATGTCTTATTGTTTCTCAGAGTGAGAGCTTGGTGTCCTTTAAAGAAGATCATGTTGTTTTTGGACTTGTATCCATGGTTCGCTACATTGTTGCAGATGCAATGATGGAACCTTGGCCTAGGAATTGCAATCACATTGAATGTTTCTTTAGGTTTGGCGGTGATTTGGACAACAGCTATGCCCCTGTAAAGGTGAAAAGGAGGTTAGAGTCTGAAATGATTGAACAAATCACTCAAGAAAACAACCTACCTAAAAAACTAGACCGTTTAACATTAAATGATGTTGATGGTGTAGTTGGAATTGAAGATTGTGTGGTTTGTATTGAGTCTGGCCCTTCTCTGGTTGCCAGAGTTGAAATGCTTTCTGTGAAAAACATGTATAACCCACCGGAATCTGAAGAATCTGGTGAAGAAAGTGAGAGCCAAGATGAGGTTTTGGACGACTCTTATTCTACTTCGAATGGAAATGAGTCAGTTGCCATAAAAGCTAGGGACGATGGAAAAGAGAGGAATATAGGCAGCGATAAAATAGACAGTGAAAATGATATTTCGAACAATGATTTGGGTGGGGGATATGGAGACTCGAGTGAGAATAGATGTGGCAATGGCAATAGAAGAAGTGAAAGTAGAGGCAAAATCTGGTGA

Protein sequence

MPSGLHNLPSLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLLADECTSLESIMSLNLCLEELLKFANCLKLKKEGNILESLLQGVHLVEKEGQELYDMGIYHGGLGLKVGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCIDNSLAFALCLIVSQSESLVSFKEDHVVFGLVSMVRYIVADAMMEPWPRNCNHIECFFRFGGDLDNSYAPVKVKRRLESEMIEQITQENNLPKKLDRLTLNDVDGVVGIEDCVVCIESGPSLVARVEMLSVKNMYNPPESEESGEESESQDEVLDDSYSTSNGNESVAIKARDDGKERNIGSDKIDSENDISNNDLGGGYGDSSENRCGNGNRRSESRGKIW

Homology

[Close]

BLAST of Bhi04G002074 vs. TAIR 10
Match: AT5G45200.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 87.8 bits (216), Expect = 2.0e-17
Identity = 67/180 (37.22%), Postives = 92/180 (51.11%), Query Frame = 0


Query: 2    PSGLHNLPSLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLLA 61
            P G++ L S+  L LS N F  LP++I Y L  L+ L+L HC  L S+P LPPNL  L A
Sbjct: 864  PRGIYGLSSVRRLSLSSNEFRILPRSIGY-LYHLNWLDLKHCKNLVSVPMLPPNLQWLDA 923

Query: 62   DECTSLESIMSLN-------LCLEELLKFANCLKL-KKEGNILESLLQGVHLVEKEGQEL 121
              C SLE+I  L+         L     F NC KL K E N +ES  +    +       
Sbjct: 924  HGCISLETISILSDPLLAETEHLHSTFIFTNCTKLYKVEENSIESYPRKKIQLMSNALAR 983

Query: 122  YDMGIYHGGLGLKVGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCIDNSLA-FALCLIVS 173
            Y+ G+    L + +G  +PG ++P WF N++  G  +   LP+H     LA  ALC +VS
Sbjct: 984  YEKGL---ALDVLIGICFPGWQVPGWF-NHRTVGLELKQNLPRHWNAGGLAGIALCAVVS 1038

[Close]

BLAST of Bhi04G002074 vs. TAIR 10
Match: AT4G19510.1 (Disease resistance protein (TIR-NBS-LRR class) )

HSP 1 Score: 84.0 bits (206), Expect = 2.9e-16
Identity = 66/183 (36.07%), Postives = 93/183 (50.82%), Query Frame = 0


Query: 1    MPSGLHNLPSLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLL 60
            +P    +L SL  L LS NN ETLP++I   L SL  L+L HC RL+SLP LP NL  L 
Sbjct: 859  LPDKFSSLRSLRCLCLSRNNIETLPESI-EKLYSLLLLDLKHCCRLKSLPLLPSNLQYLD 918

Query: 61   ADECTSLESI---MSLNLCLEEL---LKFANCLKL---KKEGNILESLLQGVHLVEKEGQ 120
            A  C SLE++   +++ L  E +     F +C KL   +KE  + ++ L+   L      
Sbjct: 919  AHGCGSLENVSKPLTIPLVTERMHTTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSRH 978

Query: 121  ELYDMGIYHGGLGLK--VGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCIDNSLAFALCL 173
                    H GL L   V   +PG +IP WFS+ +      T LLP  C    +  +LC+
Sbjct: 979  H------NHKGLLLDPLVAVCFPGHDIPSWFSHQKMGSLIETDLLPHWCNSKFIGASLCV 1034

[Close]

BLAST of Bhi04G002074 vs. TAIR 10
Match: AT1G63870.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 73.2 bits (178), Expect = 5.2e-13
Identity = 59/173 (34.10%), Postives = 86/173 (49.71%), Query Frame = 0


Query: 4   GLHNLP-SLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLLAD 63
           G+ +LP SL +LDL  ++ ET+P+ I  +L  L  L LS C RL SLPELP +L  L+AD
Sbjct: 753 GITHLPISLKQLDLIDSDIETIPECI-KSLHLLYILNLSGCRRLASLPELPSSLRFLMAD 812

Query: 64  ECTSLESIMSLNLCLEELLKFANCLKLKKEGN---ILESLLQGVHLVEKEGQELYDMGIY 123
           +C SLE++       +  L F NC KL ++     +  SLL G  L+             
Sbjct: 813 DCESLETVFCPLNTPKAELNFTNCFKLGQQAQRAIVQRSLLLGTTLL------------- 872

Query: 124 HGGLGLKVGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCIDNSLAFALCLIVS 173
                       PG E+P  F ++Q +GNT+T       I     F +C+++S
Sbjct: 873 ------------PGRELPAEF-DHQGKGNTLT-------IRPGTGFVVCIVIS 891

[Close]

BLAST of Bhi04G002074 vs. TAIR 10
Match: AT1G63750.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-12
Identity = 57/181 (31.49%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 4   GLHNLP-SLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLLAD 63
           GL  LP SL  L+LS  + E++P  I   L  L  L LS CTRL SLP+LP ++  L A+
Sbjct: 593 GLTQLPTSLRHLNLSYTDIESIPDCI-KALHQLEELCLSGCTRLASLPDLPCSIKALEAE 652

Query: 64  ECTSLESIMSLNLCLEELLKFANCLKLKKEGNILESLLQGVHLVEKEGQELYDMGIYHGG 123
           +C SLES+ S        L F NC KL   G   E++++     +  G            
Sbjct: 653 DCESLESVSSPLYTPSARLSFTNCFKL--GGEAREAIIR--RSSDSTG------------ 712

Query: 124 LGLKVGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCIDNSLAFALCLIVSQSESLVSFKE 183
                  + PG E+P  F +++A+GN++++LLP   +  +  F +C+++S    +     
Sbjct: 713 -----SVLLPGREVPAEF-DHRAQGNSLSILLP---LGGNSQFMVCVVISPRHDITKMSN 747

[Close]

BLAST of Bhi04G002074 vs. TAIR 10
Match: AT1G63750.2 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 70.9 bits (172), Expect = 2.6e-12
Identity = 57/181 (31.49%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 4   GLHNLP-SLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLLAD 63
           GL  LP SL  L+LS  + E++P  I   L  L  L LS CTRL SLP+LP ++  L A+
Sbjct: 593 GLTQLPTSLRHLNLSYTDIESIPDCI-KALHQLEELCLSGCTRLASLPDLPCSIKALEAE 652

Query: 64  ECTSLESIMSLNLCLEELLKFANCLKLKKEGNILESLLQGVHLVEKEGQELYDMGIYHGG 123
           +C SLES+ S        L F NC KL   G   E++++     +  G            
Sbjct: 653 DCESLESVSSPLYTPSARLSFTNCFKL--GGEAREAIIR--RSSDSTG------------ 712

Query: 124 LGLKVGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCIDNSLAFALCLIVSQSESLVSFKE 183
                  + PG E+P  F +++A+GN++++LLP   +  +  F +C+++S    +     
Sbjct: 713 -----SVLLPGREVPAEF-DHRAQGNSLSILLP---LGGNSQFMVCVVISPRHDITKMSN 747

[Close]

BLAST of Bhi04G002074 vs. ExPASy Swiss-Prot
Match: F4JT80 (Disease resistance protein RPP2B OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 SV=2)

HSP 1 Score: 84.0 bits (206), Expect = 4.1e-15
Identity = 66/183 (36.07%), Postives = 93/183 (50.82%), Query Frame = 0


Query: 1    MPSGLHNLPSLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLL 60
            +P    +L SL  L LS NN ETLP++I   L SL  L+L HC RL+SLP LP NL  L 
Sbjct: 856  LPDKFSSLRSLRCLCLSRNNIETLPESI-EKLYSLLLLDLKHCCRLKSLPLLPSNLQYLD 915

Query: 61   ADECTSLESI---MSLNLCLEEL---LKFANCLKL---KKEGNILESLLQGVHLVEKEGQ 120
            A  C SLE++   +++ L  E +     F +C KL   +KE  + ++ L+   L      
Sbjct: 916  AHGCGSLENVSKPLTIPLVTERMHTTFIFTDCFKLNQAEKEDIVAQAQLKSQLLARTSRH 975

Query: 121  ELYDMGIYHGGLGLK--VGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCIDNSLAFALCL 173
                    H GL L   V   +PG +IP WFS+ +      T LLP  C    +  +LC+
Sbjct: 976  H------NHKGLLLDPLVAVCFPGHDIPSWFSHQKMGSLIETDLLPHWCNSKFIGASLCV 1031

[Close]

BLAST of Bhi04G002074 vs. ExPASy Swiss-Prot
Match: F4I594 (Disease resistance protein RML1A OS=Arabidopsis thaliana OX=3702 GN=RLM1A PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.8e-10
Identity = 54/170 (31.76%), Postives = 79/170 (46.47%), Query Frame = 0


Query: 6   HNLPSLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLLADECT 65
           H   SL  LDLS  + E +  +   +L  L  L L  C +L+SLPELP +L  L A++C 
Sbjct: 756 HLPSSLQTLDLSSTDIEMIADSCIKDLQRLDHLRLCRCRKLKSLPELPASLRLLTAEDCE 815

Query: 66  SLESIMSLNLCLEELLKFANCLKLKKEGN---ILESLLQGVHLVEKEGQELYDMGIYHGG 125
           SLE +          L F NCLKL +E     I +SL++                     
Sbjct: 816 SLERVTYPLNTPTGQLNFTNCLKLGEEAQRVIIQQSLVK--------------------- 875

Query: 126 LGLKVGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCIDNSLAFALCLIVS 173
                 A +PGS +P  F N++A GN++ +L+       S AF  C+++S
Sbjct: 876 -----HACFPGSVMPSEF-NHRARGNSLKILVKSSA---SFAFKACVLIS 895

[Close]

BLAST of Bhi04G002074 vs. ExPASy Swiss-Prot
Match: Q9CAK1 (Disease resistance protein RML1B OS=Arabidopsis thaliana OX=3702 GN=RLM1B PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-09
Identity = 54/172 (31.40%), Postives = 89/172 (51.74%), Query Frame = 0


Query: 5   LHNLP-SLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLLADE 64
           L +LP SL+ L+L   + E +P   F +L  L  + L  C RL SLPELP +L TL+AD+
Sbjct: 756 LTHLPTSLTTLNLCYTDIERIPD-CFKSLHQLKGVNLRGCRRLASLPELPRSLLTLVADD 815

Query: 65  CTSLESIMSLNLCLEELLKFANCLKLKKEGNILESLLQGVHLVEKEGQELYDMGIYHGGL 124
           C SLE++      L+    FANC KL +E     +++Q    + K               
Sbjct: 816 CESLETVFCPLNTLKASFSFANCFKLDREAR--RAIIQQSFFMGK--------------- 875

Query: 125 GLKVGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCIDNSLAFALCLIVSQSE 176
                A+ PG E+P  F +++A+G ++T+   +   +   +F  C++VS+++
Sbjct: 876 -----AVLPGREVPAVF-DHRAKGYSLTI---RPDGNPYTSFVFCVVVSRNQ 900

[Close]

BLAST of Bhi04G002074 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 3.4e-09
Identity = 57/171 (33.33%), Postives = 87/171 (50.88%), Query Frame = 0


Query: 1    MPSGLHNLPSLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLL 60
            +P  + +L SL +LDLS NNFE LP +I   L +L +L+L  C RL  LPELPP L+ L 
Sbjct: 850  LPEEIGSLSSLKKLDLSRNNFEHLPSSI-AQLGALQSLDLKDCQRLTQLPELPPELNELH 909

Query: 61   ADECTSLESIMSLNLCLEELLKFANCLKLKKEGNILESLLQGVHLVEKEGQELYDMGIYH 120
             D   +L+ I  L    ++L +    +KL    N     L    + +      +D+    
Sbjct: 910  VDCHMALKFIHYLVTKRKKLHR----VKLDDAHNDTMYNLFAYTMFQNISSMRHDISASD 969

Query: 121  G-GLGLKVGAMYPGSEIPQWFSNNQAEGNTVTLLLPQ--HCIDNSLAFALC 169
               L +  G  YP  +IP WF ++Q   ++V++ LP+  +  D  L FA+C
Sbjct: 970  SLSLTVFTGQPYP-EKIPSWF-HHQGWDSSVSVNLPENWYIPDKFLGFAVC 1013

[Close]

BLAST of Bhi04G002074 vs. ExPASy Swiss-Prot
Match: C4B7M7 (Disease resistance protein RPS4 OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-08
Identity = 61/176 (34.66%), Postives = 85/176 (48.30%), Query Frame = 0


Query: 8    LPSLSELDLSGN-NFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLLADECTS 67
            LPS+  L LS N     LP  I   LS L  L+L +CT L S+PE PPNL  L A  C+S
Sbjct: 837  LPSVQYLCLSRNAKISCLPVGI-SQLSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSS 896

Query: 68   LESI---MSLNLCLEE---LLKFANCLKLKKEGNILESLLQGVHLVEKEGQEL-YDMGIY 127
            L+++   ++  +  E+      F NC  L++     E +       +++ Q L Y    Y
Sbjct: 897  LKTVSKPLARIMPTEQNHSTFIFTNCENLEQAAK--EEI---TSYAQRKCQLLSYARKRY 956

Query: 128  HGGLGLK--VGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCIDNSLA-FALCLIVS 173
            +GGL  +      +PG E+P WF +          LLP H  D  LA  ALC +VS
Sbjct: 957  NGGLVSESLFSTCFPGCEVPSWFCHETVGSELEVKLLP-HWHDKKLAGIALCAVVS 1005

[Close]

BLAST of Bhi04G002074 vs. ExPASy TrEMBL
Match: V4VR00 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10019444mg PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-20
Identity = 77/208 (37.02%), Postives = 105/208 (50.48%), Query Frame = 0


Query: 1   MPSGLHNLPSLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLL 60
           +P  +  L SL  L LSGNNFE+LP +I   LS L  L LS C  L+SLPELPP+L  L 
Sbjct: 240 IPQEIGCLSSLEWLHLSGNNFESLPASI-KQLSRLRELFLSDCNMLQSLPELPPSLELLD 299

Query: 61  ADECTSLESIMSLNLCLEEL------------------------------LKFANCLKLK 120
           A  C  L+S+  +  CLEEL                                  NC KL 
Sbjct: 300 ASNCQRLQSLPEIPSCLEELDASLLEKLSKHSRNEVEFHFSRHQITSSSEFWLINCSKLA 359

Query: 121 KEG--NILESLLQGVHLVEKEGQELYDMGIYHGGLGLKVGAMYPGSEIPQWFSNNQAEGN 177
           +E   N+ +S L+  H+     + LY++ +  G LG     + PGSEIP+WFS NQ+ G+
Sbjct: 360 EEANRNLADSQLRIQHMAIASLRRLYELEMERGRLG-GPSIILPGSEIPEWFS-NQSSGS 419

[Close]

BLAST of Bhi04G002074 vs. ExPASy TrEMBL
Match: A0A2P5DZ29 (LRR domain containing protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_017640 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-18
Identity = 72/192 (37.50%), Postives = 105/192 (54.69%), Query Frame = 0


Query: 1   MPSGLHNLPSLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLL 60
           +P  L +L SL+ +DLS N FE +P +I   L  L  L +S C +LR LPELPP++ T+ 
Sbjct: 296 IPDWLCSLNSLNIIDLSENAFERIPSSI-RKLDKLYHLNVSGCKKLRHLPELPPSIRTVN 355

Query: 61  ADECTSLESIMSL------NLCLEEL-------LKFANCLKLKKEG--NILESLLQGVHL 120
           A ECT L ++ +L       L L EL         F+NCL+++K    +IL   L  VH 
Sbjct: 356 ASECTLLHTVDTLKVLLIGTLSLAELEFPNLYEFTFSNCLEMEKSARDSILSYFLSAVH- 415

Query: 121 VEKEGQELYDMGIYHGGLGLKVGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCIDNS-LA 177
                     M I      + V   YPG EIP+WFS +Q EG++ T+ LP +C++N+ L 
Sbjct: 416 --------NQMNISSWNQHMAVPTCYPGDEIPEWFS-HQWEGSSTTVTLPINCLNNNFLG 475

[Close]

BLAST of Bhi04G002074 vs. ExPASy TrEMBL
Match: A0A067DYQ4 (TIR domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g044579mg PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.1e-18
Identity = 74/192 (38.54%), Postives = 93/192 (48.44%), Query Frame = 0


Query: 8   LPSLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLLADECTSL 67
           L SL  LDLSGNNFE+LP +I   LS L  L+LS+C  L SLPELP  L  L A  C  L
Sbjct: 809 LSSLQWLDLSGNNFESLPSSI-KQLSQLRKLDLSNCNMLLSLPELPLFLEDLEARNCKRL 868

Query: 68  ESIMSLNLCLEEL--------------------------LKFANCLKL--KKEGNILESL 127
           + +  +  CLEEL                           KF NCLKL  K    IL   
Sbjct: 869 QFLPEIPSCLEELDASMLEKPPKTSHVDEFWTEEMLSIKFKFTNCLKLNEKAYNKILADS 928

Query: 128 LQGVHLVEKEGQELYDMGIYHGGLGLKVGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCI 172
              +  +      L+D          ++    PGSEIP WFS NQ+ G+++TL LPQH  
Sbjct: 929 KLTIQRMAIASLRLFD--------EKELSIFVPGSEIPDWFS-NQSSGSSITLQLPQHSF 988

[Close]

BLAST of Bhi04G002074 vs. ExPASy TrEMBL
Match: V4TPN7 (TIR domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10018573mg PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.1e-18
Identity = 74/192 (38.54%), Postives = 93/192 (48.44%), Query Frame = 0


Query: 8    LPSLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLLADECTSL 67
            L SL  LDLSGNNFE+LP +I   LS L  L+LS+C  L SLPELP  L  L A  C  L
Sbjct: 832  LSSLQWLDLSGNNFESLPSSI-KQLSQLRKLDLSNCNMLLSLPELPLFLEDLEARNCKRL 891

Query: 68   ESIMSLNLCLEEL--------------------------LKFANCLKL--KKEGNILESL 127
            + +  +  CLEEL                           KF NCLKL  K    IL   
Sbjct: 892  QFLPEIPSCLEELDAPMLEKPPKTSHVDEFWTEEMLSIKFKFTNCLKLNEKAYNKILADS 951

Query: 128  LQGVHLVEKEGQELYDMGIYHGGLGLKVGAMYPGSEIPQWFSNNQAEGNTVTLLLPQHCI 172
               +  +      L+D          ++    PGSEIP WFS NQ+ G+++TL LPQH  
Sbjct: 952  KLTIQRMAIASLRLFD--------EKELSIFVPGSEIPDWFS-NQSSGSSITLQLPQHSF 1011

[Close]

BLAST of Bhi04G002074 vs. ExPASy TrEMBL
Match: A0A067DUZ1 (TIR domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g046888mg PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.6e-17
Identity = 72/229 (31.44%), Postives = 107/229 (46.72%), Query Frame = 0


Query: 1    MPSGLHNLPSLSELDLSGNNFETLPQTIFYNLSSLSTLELSHCTRLRSLPELPPNLHTLL 60
            +P  +  LPSL  L+L  NNFE+LP +I   LS L  L+LS+C+ L+S+PELPP+L  L 
Sbjct: 801  IPEEIGCLPSLEWLELRENNFESLPVSI-KQLSRLKRLDLSNCSMLQSIPELPPSLKWLQ 860

Query: 61   ADECTSLESIMSLNLCLEEL---------------------------LKFANCLKLKKE- 120
            A  C  L+S+  +    EE+                             F +C+K+ +E 
Sbjct: 861  AGNCKRLQSLPEIPSRPEEIDASLLQKLSKYSYDDEVEDVNGSSSIRFLFMDCIKMYQEE 920

Query: 121  --GNILESLLQGVHLVEKEGQELYDMGIYHGGLGLKVGAMY------------------- 172
               N+ ES L+  H+     +  Y+  +    L     ++Y                   
Sbjct: 921  SKNNLAESQLRIQHMAVTSLRLFYEFQVIRNSLSFAPLSLYLYLRFVASQIMIFILQECC 980

The following BLAST results are available for this feature:

BLAST of Bhi04G002074 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45200.1	2.0e-17	37.22	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT4G19510.1	2.9e-16	36.07	Disease resistance protein (TIR-NBS-LRR class)	[more]
AT1G63870.1	5.2e-13	34.10	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G63750.1	2.6e-12	31.49	Disease resistance protein (TIR-NBS-LRR class) family	[more]
AT1G63750.2	2.6e-12	31.49	Disease resistance protein (TIR-NBS-LRR class) family	[more]

BLAST of Bhi04G002074 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4JT80	4.1e-15	36.07	Disease resistance protein RPP2B OS=Arabidopsis thaliana OX=3702 GN=RPP2B PE=1 S...	[more]
F4I594	1.8e-10	31.76	Disease resistance protein RML1A OS=Arabidopsis thaliana OX=3702 GN=RLM1A PE=3 S...	[more]
Q9CAK1	1.2e-09	31.40	Disease resistance protein RML1B OS=Arabidopsis thaliana OX=3702 GN=RLM1B PE=2 S...	[more]
Q40392	3.4e-09	33.33	TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1	[more]
C4B7M7	1.3e-08	34.66	Disease resistance protein RPS4 OS=Arabidopsis thaliana OX=3702 GN=RPS4 PE=2 SV=...	[more]

BLAST of Bhi04G002074 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
V4VR00	1.5e-20	37.02	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10019444mg PE=4 ...	[more]
A0A2P5DZ29	2.4e-18	37.50	LRR domain containing protein (Fragment) OS=Parasponia andersonii OX=3476 GN=Pan...	[more]
A0A067DYQ4	4.1e-18	38.54	TIR domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0...	[more]
V4TPN7	4.1e-18	38.54	TIR domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10018573mg...	[more]
A0A067DUZ1	4.6e-17	31.44	TIR domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g046888mg PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 8..31 e-value: 1.2E-4 score: 31.4
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 1..151 e-value: 8.4E-13 score: 49.5
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 7..43 e-value: 6.5E-7 score: 29.0
IPR001611	Leucine-rich repeat	PROSITE	PS51450	LRR	coord: 10..31 score: 7.234511
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 349..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..380
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 327..348
None	No IPR available	PANTHER	PTHR11017:SF434	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 1..173
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 3..83
IPR044974	Disease resistance protein, plants	PANTHER	PTHR11017	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	coord: 1..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M002074	Bhi04M002074	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
molecular_function	GO:0005515	protein binding