Bhi04G002033 (gene) Wax gourd (B227) v1

Overview


Name	Bhi04G002033
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr4: 67351396 .. 67351605 (-)
RNA-Seq Expression	Bhi04G002033
Synteny	Bhi04G002033

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTCTCCCACTGGAGCAGGATCACACGCTGATTTTACTTCAGTTCTCAATACAGTTGTCAGGCAGTTATCAGACCATGACAAAACTCAAGAAGATGCAAATTCTTTTGCATCAGTAAATAATGAAGTCGAAGACGACGAAGATGATTATGATCCCTTCGCCAATTACGACATCAGTGACCCATTTTCAGACTCACAGCCAAATTAG

mRNA sequence

ATGAGTTCTCCCACTGGAGCAGGATCACACGCTGATTTTACTTCAGTTCTCAATACAGTTGTCAGGCAGTTATCAGACCATGACAAAACTCAAGAAGATGCAAATTCTTTTGCATCAGTAAATAATGAAGTCGAAGACGACGAAGATGATTATGATCCCTTCGCCAATTACGACATCAGTGACCCATTTTCAGACTCACAGCCAAATTAG

Coding sequence (CDS)

ATGAGTTCTCCCACTGGAGCAGGATCACACGCTGATTTTACTTCAGTTCTCAATACAGTTGTCAGGCAGTTATCAGACCATGACAAAACTCAAGAAGATGCAAATTCTTTTGCATCAGTAAATAATGAAGTCGAAGACGACGAAGATGATTATGATCCCTTCGCCAATTACGACATCAGTGACCCATTTTCAGACTCACAGCCAAATTAG

Protein sequence

MSSPTGAGSHADFTSVLNTVVRQLSDHDKTQEDANSFASVNNEVEDDEDDYDPFANYDISDPFSDSQPN

Homology

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BLAST of Bhi04G002033 vs. ExPASy TrEMBL
Match: A0A5A7UWR6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00160 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.7e-08
Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 1  MSSPTGAGSHADFTSVLNTVVRQLSDHDKTQEDANSFASVNNEV-EDDEDDYDPFANYDI 60
          MSS  G GS  +F  V+NTV  Q+SD D  Q +ANS  S+NN + EDDEDD++ + +YDI
Sbjct: 17 MSSLAGVGSQEEFNFVVNTVAVQISDPDDLQAEANSPISINNVIEEDDEDDFNSYVDYDI 76

Query: 61 SDPFSDSQP 69
          +DPF DSQP
Sbjct: 77 NDPFLDSQP 85

The following BLAST results are available for this feature:

BLAST of Bhi04G002033 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi04G002033 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi04G002033 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UWR6	2.7e-08	55.07	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M002033	Bhi04M002033	mRNA