Bhi04G002031 (gene) Wax gourd (B227) v1

Overview
NameBhi04G002031
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionEnzymatic polyprotein
Locationchr4: 67347285 .. 67347485 (+)
RNA-Seq ExpressionBhi04G002031
SyntenyBhi04G002031
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGAGATCTTCGAAGGAAATGAAATCAATTGGAACTCTCTCACCTATGGAGACATTACCAGTAACATTCAAGCACTATGCTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATCATCAAAGATGCAGATTATCGAAAGGAATTAGGGACTTTCTGCAAACAATACGGCGTTGAACAAGATCTACCGCCTTAA

mRNA sequence

ATGTCTGAGATCTTCGAAGGAAATGAAATCAATTGGAACTCTCTCACCTATGGAGACATTACCAGTAACATTCAAGCACTATGCTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATCATCAAAGATGCAGATTATCGAAAGGAATTAGGGACTTTCTGCAAACAATACGGCGTTGAACAAGATCTACCGCCTTAA

Coding sequence (CDS)

ATGTCTGAGATCTTCGAAGGAAATGAAATCAATTGGAACTCTCTCACCTATGGAGACATTACCAGTAACATTCAAGCACTATGCTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATCATCAAAGATGCAGATTATCGAAAGGAATTAGGGACTTTCTGCAAACAATACGGCGTTGAACAAGATCTACCGCCTTAA

Protein sequence

MSEIFEGNEINWNSLTYGDITSNIQALCLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQDLPP
Homology
[Close]
BLAST of Bhi04G002031 vs. ExPASy TrEMBL
Match: A0A5A7URX9 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00980 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.7e-15
Identity = 36/62 (58.06%), Postives = 50/62 (80.65%), Query Frame = 0 

Query: 1   MSEIFEGNEINWNSLTYGDITSNIQALCLSLCKDNKHNQRIIKDADYRKELGTFCKQYGV 60
           M+E     +I+W +LTYGDI+S +Q +C++LC +NKH  ++IKD+DYRKELGTFCKQYG+
Sbjct: 705 MTENSVNQQIDWANLTYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGL 764

Query: 61  EQ 63
            Q
Sbjct: 765 SQ 766

[Close]
BLAST of Bhi04G002031 vs. ExPASy TrEMBL
Match: A0A5D3DES6 (Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold318G00180 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 6.3e-15
Identity = 33/54 (61.11%), Postives = 49/54 (90.74%), Query Frame = 0 

Query: 9  EINWNSLTYGDITSNIQALCLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ 63
          +INW+ LT+GDI++ +QA+C++LC +NKH  ++IKD+DYRKELGTFCKQYG+++
Sbjct: 9  QINWSELTFGDISATVQAICINLCIENKHTTKVIKDSDYRKELGTFCKQYGLDR 62

[Close]
BLAST of Bhi04G002031 vs. ExPASy TrEMBL
Match: A0A5D3DBS1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00570 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.2e-15
Identity = 35/54 (64.81%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 9   EINWNSLTYGDITSNIQALCLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ 63
           +I+W +LTYGDI+S IQ +C++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q
Sbjct: 54  QIDWANLTYGDISSTIQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQ 107

[Close]
BLAST of Bhi04G002031 vs. ExPASy TrEMBL
Match: A0A5A7VRE0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G001400 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.2e-15
Identity = 35/54 (64.81%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 9   EINWNSLTYGDITSNIQALCLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ 63
           +I+W +LTYGDI+S IQ +C++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q
Sbjct: 54  QIDWANLTYGDISSTIQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQ 107

[Close]
BLAST of Bhi04G002031 vs. ExPASy TrEMBL
Match: A0A5D3BEY3 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold690G00300 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.1e-14
Identity = 34/54 (62.96%), Postives = 47/54 (87.04%), Query Frame = 0 

Query: 9   EINWNSLTYGDITSNIQALCLSLCKDNKHNQRIIKDADYRKELGTFCKQYGVEQ 63
           +I+W +LTYGDI+S +Q +C++LC +NKH  ++IKD+DYRKELGTFCKQYG+ Q
Sbjct: 822 QIDWANLTYGDISSTVQMICVNLCTENKHTTKVIKDSDYRKELGTFCKQYGLSQ 875

The following BLAST results are available for this feature:
BLAST of Bhi04G002031 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G002031 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G002031 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7URX93.7e-1558.06Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21... [more]
A0A5D3DES66.3e-1561.11Zf-CCHC domain-containing protein/MP domain-containing protein OS=Cucumis melo v... [more]
A0A5D3DBS18.2e-1564.81Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39... [more]
A0A5A7VRE08.2e-1564.81Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold23... [more]
A0A5D3BEY31.1e-1462.96Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold69... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M002031Bhi04M002031mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding