Bhi04G001964 (gene) Wax gourd (B227) v1

Overview
NameBhi04G001964
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionActin-related protein 2/3 complex subunit 5
Locationchr4: 65819831 .. 65825728 (-)
RNA-Seq ExpressionBhi04G001964
SyntenyBhi04G001964
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACTACAGGTGAATTTGTGGAGGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAGTCTCGAAAGATCGAGAGCTTACTTAAACAGTAATGAATTCTGTACCTGCTTTGTGATTTATTCGATTTAAATTTATTTAGCTCTTCCTAATGAAGATTCCCCAATTTGTCAATTTTTCTATTCGTAAAAGGTCTAGACCAGTCGAAGCTCTTAAAACTGCGCTCGAAGGTTCCCCTCCAAACACCCGAGATGAGCGTTGCAAGGTATCGTTTCTTATCCTTTCTTTCTTCCTGCCTACGACAATTTGGTTTCAGATTGTTGTTTCTATACCCATGGGTTTTCCTTGCATTTTGATTTTATTTTATTATCTAATTTATGGTTAATTCTACAAATATTAAGGGAAATTATTGGAGAATTCCCTTTTATTTGGTGCTATTTCTTATGTTTTTCTTACATTTTCTCAATATTGAGGCCGATTAGTATGGCTGAATGTTGATTTAATTCTTGGGAATAGTTTGCTGTATTTGTTTGCAGTTACTCAAAATGAATAGGCTTGCTGTTTCTTTCATCTTTATGTTTTGTGGGTCTGCTTGACGTTGGGAGGACGAGTTAATCTGATGTGATTATTTGGACTTCTCCAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCGTTGGATCCAGAGTACTATGATATTCTAATGAAGTGAGTTTGTCCGGTATCAATTCTTATTGCTTCTACTTATCTCAGCATGAGTATAAAGTTGGTCATTCCTATTGTTTTTCTCTTTTTACTTTTTCCTTAGTTAATTCCAAGTTTACTTTCTGATATTAGTCTTTTGCTATGAGATTTATACTCAAGTTGTTGGTTTGATCCTACTATGAGTTTTGCAAACAAACTTCTGTTTTCTCTTTTCCTGCTCTCATCAAATTTCTACCGCTAGCTGTGTCGGATATGGACACACTAGCTAAACTATATGCTTCTTAGGGCCCCTTCCTTTCAATAGTCTCTCAATTTGTTTTTCGAAGTGTTCCCAAATATTCAAGGATTATGCACACCAACAAGAAATAAGTGAAGATGCTTGGCAACACTAATTTGGCCAATGTTAATCTTCCCCAATCGAAGACCATTTTCATGTGGATCATTTTTCTGAGATTAATGACTGGGGTCGAACCACAGGGAGGTTAGGATTTAATCTTCTCTTGAGCTAAATTCGACTATGAAAAACAGTAAAAATGGGGTTGTGGTTTTGGATAAAATGAAACCATGCAAGGATAAATGTAAACTAGGATTGATCTATCTAGTTTCTAGTGCCATTCAATGCAATTTCTATCCTCGATTTCTGGAACTTAAACATGCAACCGATTCATGTATGCACAACTACTCGCTTGATGCAATCTAACGCTCTACAAAGGCAGACAACTAGCAAGAATCTAATCGAGAAAGCGTCCTAATTATTAATTAGGTCGGAAAGGCCATACCCTAACTAACCTACATGTTTCTAATCCTATTGGGTTAGATAGCGTCCATATAGAATTAAAAACACATGCATTATGATTTAGGATTCAATTATGTTGATTAATTGTTAGGAAAGCCATATTCAATTAACCAATTTTATCTTCGAACCTAGCAATTCATGCTTCCTAGGAATAGCCATCCAATGCACAATTAACTAATGTTATTTGAGTGATTTTAGCTAGACATCTAGGAAAGAACGTGACATAACTAAAAATCGATTAGCCATGCATGATTATGCGTGAACAGTCAACCTCACGATTATGCTTTTAGAAATTATAATGGATTCGAAGAAGACACAAACTCAGCATGCAATTCATCAAGAATATAGAATCCTCAAGAAATTGGCAAAGAATTAAAATTCCAAAAACTAGATAGAAAAACCATTACCTCGAACAATCCATAGACAAATCGAAGAGGAAGATCCAATCCATTATTTACAATCCAAAAGAAAATAAAAATCTAACCTAGAGATGCAAAAAAGATAAAAGAAGGGGAAGAACTAGTAGCCACTCCTCGGCCTCCACCAGATTTTTGCATCCCTCTTACCTAATTTGGAAAGAATGCATTTATACCATAGGCGTAGTGTTGCAACGCTCTTATCGATCCAACCCTCAAGCATTGGTGCAGAGGCACAATGCTCCGTGTGATGCTTTCTTGCAGCGAGCGCTTGTGCGTGATGGATGCGTTGACGTTTCGTTAATAATCGCAGCATTGCAACGCAAAGTGTAGTGTTGCGACGCTGCCTTCTATACGAGCCTACTGCCCTTACAACATTGCGTTAGAGTGTTGAGCGAGGGTTGCGATGCTCGTCAAGGGCATTTTGGTCATTTCTCCTCCTTTGAAGCGGGTGCTCAAATCACCTCCAAATTGCTTCAAATTAACCCCATTTGACTCCAATTGCTTTCTTTGGTCTTAATACTTACAAAATAGGATAATTAACATGTAAAATCCATTAACGAGCCTAAATTAGGCTAGGAATTATAGCTTTTTTTGAGAGCTATCATGGGGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTATAATAATTTAGATTAATGATTGGGTTTCAAAAGTCCACCTTGATTGCCCTCCCAGCATCAAATGGAAGGTTTTCTGTCCTAAGTATGTGTTTGTTCCTCTTGAGTCTTAAGTACCATCAAGAATATTTGGTCATGAGATCTTATAACACTTGCTTTATTATTTATTTATTAAAGGATTCACCATGAAAGAAATTGAGAAAACCCACCCTTAATATTTCTAGAATAGCTGAAACCGGCCAAAAGAACTAAACAAAAACCCTTTATACTCCTTTTTTGTTTTTGCTACTGCTTTGTTTCTGCCTTTGGTCATGGGAACTTTCTTTTTTTGTATTGGCCATTTTGTTATGGCTCTATTTCTCTTTCTGCCGCTCCTTTGTAGATTTTGATGTGCCCATTTATCATTGACATTTTTGTATCTATCTCCTTGATCTCTCTTGTATTGGTCACCGTTGATCCTTCTGGATATTTCATACAGCAATGAAATGTTTCTTATCCCAAAAAAAATTTAGGCTTGGGAGAAGGGATATTTGTATTTGGAGTTCTAATCTTCTTAAGGGTTTTTCCTCTAAGTCTTTCTTTCGCTTGTTGGACCCCTCTCTTGTTAGCGAGTCAATTTTTGATGTGTTATGGAGGATTAAGATTATAAAGAAAGTGAAGTTCTTTACCTGAAAAATTTTATTGGGCCGTGTCGTGTGAACACTTTGGATAGACTTCCGAGAAGAATGCCCTTGTTAATGGGTCCATTTTGTTGTATTCCTTATCTAAAGGTAGATAAAGGTAGAGGAAGACTAGGATCACATTTTCTGGAGTAGTTAGTTTGCGAGGTCTGTTTGGGATTATTTCTTTGAGGCATTTGATCTTGTGTTAGCTCGTCAGAGGGATGTCCATGCGACCACTGAGGAGTTCCTCCTCCATTTACCTTTCAGAGAGAAAGGTCGTTTTTGTGGTTTGTGAGGGTGTGTGCTTTGTTTTGAGATCTTTGGGGGAGAGGAAGTTAGGAATTACAGAGTGTTTAGAGGTGTTGAACGGGACCGAGATTTCATATTTTTCTTTGAATTTCGATTTCAAAGGCTTTTTGTAACTACTCTCTAGGCAACTTTGTACTTAGTTGTATCCCCTTACTCTAGTGGGGTTTTTGTAGGCTTGTTTTTTTTTATACTCTTGTATTCTTTCAATTTTTTCTCTATAAAAGCAGTTGTTTCCATAGAAAAAATAATAATAATAATAATAAAATATCTTTGTTTTCTTCTTACTGTATGCATATGGCATAACAACTGGGCGAAACGGAGGATTAGGTTTCTAGTTTGGACTTTTATCTTGGGTACTGTACTAATAATGCTATCGAAGCTCCCATGTGTACCAGGAAAAAGAAAACTTTGTTAAGTCATGGAATTTCACTGCGTTTCTGGACCTTACTTTGTACTAAGACCAGAAATCATCTCCATTTTCCAAAGAGAAAACATATTGAAGATTTAAAAAATTACTCCAAATGGTGGTTTTACAGTATAGTTTCTCCAAAGCCACTTGGCCATGAACGTGATATTTCTTTTCTTGAGATTACCAAGATCGAACTCTCCAAGATGAAGAGGAAGCTTACTCTTTTCCAAATGAAAATGTATAATCTACCTTCAGTATCGGATCCCTTCAGTTCCTGAAGTCTCGGAAAAACATCGGCTTGTTTAGAAATTTTAGCACGAACCAAAAAAATCAACAAAATAAGTTGGCAGACTCGAAAAGGGAGTATTCGTCAAGTTGAGAAAATTCTCTTTCCAAAAAAAGGTGTTTGGAGTTTTGTTCAAGGAGAAAAAGCTCATTGGAAGATGGTTATCTCTAATATAGTATGGGATTGAAGCTCAACGCTGGAAAAGTGAAGTTCCATAGAAAATCAAGTTCTTCTTATGGCCCTTGCTTCTAGAGGTTTAGACACGAAGATTGTAGGAGACGAATTCAAATTAGGCTCTTTCTTCATTGGATTGTGGCTTTGTGACTTCATGGAAAAAAATTGTTCTTCCACGTCGGTTTTCTACCGGCTTAACTATTCATGTTTTTCAATGTATCCTTATACCTTTCCAGGAACCTGAAGTGTTCTTCAGTCGGTGTTGAAAGGAGAACTAGACATCTTGGGACATAGGGGTGAGCATGATAGACCGAAAGATCGAGTAGACCGACCAACCGGCTTTTACTCCTTGACAGTCGAGGTCGGTTTGAATATTTACTAAACCAACCATAGTCGATTTGGTGGCGGTTTGGTCGAAAAATCGACTCTGGCTGCCAATGCTCACCCCTATTGGGACATGCACCTTTTGACTGCCCTAAAATCGTTGTTTGATGACCAATCTTTCTCTTATCAACCAAGATTGGGACTCCAAAAGGTGCTCATGTAATAGACTAATAGTTGTCTTTGGTAGGGGTTTCATTTGGCCTCCTCCTCTAGGTTGTATTTCTTTCGTGTTTTGAATGTTATTTTTAATATATTTTTGTTTTCTTAAAAAAAATTCTTAAAATCTTTTCAAGGATATGGTTCTAGAAACTTTGATATATCAGGTTACAATTAATTGGTAGACCCAGACAAGAAATTGACTTACAGCCAAAAGGGTTAACCATATCTTGAATTTGGGAAATAGGTTCCATAATGGTTTCTTCGAATTACATTATATTGAATAAAAAATCGCCCATCTTCTCAATACTCATTGATGAAAAAAAATTCAAATTGGAGAGAGAGATCATCATTTCCAACTTGAAAGCCATCCATATAAAACCTGTGAGGAAGCCTCTAGGAAGGAGCACGATGAAGCAATTAGTAACTAAAATTAATAGGACGGTTAGAAAAGATTTCCATGAACTCATCTTGAGGCAAGTTGTCTGTTTGTTTGTTTGTTTGCTTTTGTTTTCTTTCTCCTCTTTTTCTCTTCTCTTTGCTTGCTGCTAGTATGATTGAATAATCATCTTCGTAAACACAAGCATGAAGTCGCCTGCTTCAACGAGTGCAAAAACAACTTCAAGATTGAATAACTGTTTGAGGACATGATGTGTGTTGTGGCAAACACTTAATTTATTTATAAGATATTATGCATCATCATCCAACATTTGATGGTTCCTCTGCTGTTGGTAGTTTCTTGCCAAAACTTGAGCATTTATATGTAGAAGAACTATTTGCAGGTACTTGTACAGAGGGTTATCAACTGGTGATCGTCCTACATGTGATCAGTGTCTCAGGATACATGAAAAATTAACAGAAAGGGCTGGCTTAGGCTGTATTCTCCGCTCTCTTGCAGATACTATTAACACCGTTTGA

mRNA sequence

ATGGCGACTACAGGTGAATTTGTGGAGGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAGTCTCGAAAGATCGAGAGCTTACTTAAACAGTCTAGACCAGTCGAAGCTCTTAAAACTGCGCTCGAAGGTTCCCCTCCAAACACCCGAGATGAGCGTTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCGTTGGATCCAGAGTACTATGATATTCTAATGAAGTACTTGTACAGAGGGTTATCAACTGGTGATCGTCCTACATGTGATCAGTGTCTCAGGATACATGAAAAATTAACAGAAAGGGCTGGCTTAGGCTGTATTCTCCGCTCTCTTGCAGATACTATTAACACCGTTTGA

Coding sequence (CDS)

ATGGCGACTACAGGTGAATTTGTGGAGGCAGATAATGCAGAAGCCATAATCACCAGAATTGAGCACAAGTCTCGAAAGATCGAGAGCTTACTTAAACAGTCTAGACCAGTCGAAGCTCTTAAAACTGCGCTCGAAGGTTCCCCTCCAAACACCCGAGATGAGCGTTGCAAGTCAGCAAATTGGATTGTGGTGCATAGGGCTCTCATGGCTATAAAGGATGTAGATGGGATGTTTTCTTCGTTGGATCCAGAGTACTATGATATTCTAATGAAGTACTTGTACAGAGGGTTATCAACTGGTGATCGTCCTACATGTGATCAGTGTCTCAGGATACATGAAAAATTAACAGAAAGGGCTGGCTTAGGCTGTATTCTCCGCTCTCTTGCAGATACTATTAACACCGTTTGA

Protein sequence

MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLADTINTV
Homology
[Close]
BLAST of Bhi04G001964 vs. TAIR 10
Match: AT4G01710.1 (ARP2/3 complex 16 kDa subunit (p16-Arc) )

HSP 1 Score: 236.1 bits (601), Expect = 1.6e-62
Identity = 116/130 (89.23%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 6   EFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVH 65
           EFVEADNAEAII RIE KSRKIESLLKQ + VEALKTALEGSPP TRDERCKSANWIVVH
Sbjct: 3   EFVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVH 62

Query: 66  RALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCIL 125
           RALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLTERAGLGCIL
Sbjct: 63  RALMAIKDIDGMLNALDVEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCIL 122

Query: 126 RSLADTINTV 136
           R L DTINTV
Sbjct: 123 RCLTDTINTV 132

[Close]
BLAST of Bhi04G001964 vs. TAIR 10
Match: AT5G65274.1 (ARP2/3 complex 16 kDa subunit (p16-Arc) )

HSP 1 Score: 216.5 bits (550), Expect = 1.3e-56
Identity = 106/135 (78.52%), Postives = 116/135 (85.93%), Query Frame = 0 

Query: 1   MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSAN 60
           MA    FVEADNAE I+ RIE KS+KIESLLK  + VEALKTAL+GSPP T DERCKSAN
Sbjct: 1   MAGAAAFVEADNAEEIMARIETKSQKIESLLKHYKHVEALKTALDGSPPKTLDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120
           WIVVHRA+MAIKD++GM +SL  EYYDILMKYLYRGLSTGD PTC+QCL IHEKLTERAG
Sbjct: 61  WIVVHRAIMAIKDIEGMLNSLTAEYYDILMKYLYRGLSTGDEPTCEQCLMIHEKLTERAG 120

Query: 121 LGCILRSLADTINTV 136
           LGCILR L+DT NTV
Sbjct: 121 LGCILRCLSDTTNTV 135

[Close]
BLAST of Bhi04G001964 vs. ExPASy Swiss-Prot
Match: Q9M117 (Actin-related protein 2/3 complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=ARPC5A PE=1 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 2.3e-61
Identity = 116/130 (89.23%), Postives = 121/130 (93.08%), Query Frame = 0 

Query: 6   EFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVH 65
           EFVEADNAEAII RIE KSRKIESLLKQ + VEALKTALEGSPP TRDERCKSANWIVVH
Sbjct: 3   EFVEADNAEAIIARIETKSRKIESLLKQYKHVEALKTALEGSPPKTRDERCKSANWIVVH 62

Query: 66  RALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCIL 125
           RALMAIKD+DGM ++LD EYYDILMKYLYRGLSTGDRPTCDQCL+IHEKLTERAGLGCIL
Sbjct: 63  RALMAIKDIDGMLNALDVEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTERAGLGCIL 122

Query: 126 RSLADTINTV 136
           R L DTINTV
Sbjct: 123 RCLTDTINTV 132

[Close]
BLAST of Bhi04G001964 vs. ExPASy Swiss-Prot
Match: B3H6Y2 (Actin-related protein 2/3 complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=ARPC5B PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 1.9e-55
Identity = 106/135 (78.52%), Postives = 116/135 (85.93%), Query Frame = 0 

Query: 1   MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSAN 60
           MA    FVEADNAE I+ RIE KS+KIESLLK  + VEALKTAL+GSPP T DERCKSAN
Sbjct: 1   MAGAAAFVEADNAEEIMARIETKSQKIESLLKHYKHVEALKTALDGSPPKTLDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120
           WIVVHRA+MAIKD++GM +SL  EYYDILMKYLYRGLSTGD PTC+QCL IHEKLTERAG
Sbjct: 61  WIVVHRAIMAIKDIEGMLNSLTAEYYDILMKYLYRGLSTGDEPTCEQCLMIHEKLTERAG 120

Query: 121 LGCILRSLADTINTV 136
           LGCILR L+DT NTV
Sbjct: 121 LGCILRCLSDTTNTV 135

[Close]
BLAST of Bhi04G001964 vs. ExPASy Swiss-Prot
Match: Q6DE18 (Actin-related protein 2/3 complex subunit 5-B OS=Xenopus laevis OX=8355 GN=arpc5-b PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-09
Identity = 33/105 (31.43%), Postives = 59/105 (56.19%), Query Frame = 0 

Query: 26  KIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDP 85
           +++SL++Q   + A ++AL  SP N++++  K     +V + L + K  +++   ++LDP
Sbjct: 42  EVDSLIRQGELLRAFQSALRNSPVNSKNQVAKERTQAIVLKVLTSFKSNEIEKAVNTLDP 101

Query: 86  EYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSL 129
              D+LMKY+Y+G       +    L+ HEK     GLG I+R L
Sbjct: 102 NGIDLLMKYIYKGFEKPTENSSAILLQWHEKAFVIGGLGSIVRVL 146

[Close]
BLAST of Bhi04G001964 vs. ExPASy Swiss-Prot
Match: O15511 (Actin-related protein 2/3 complex subunit 5 OS=Homo sapiens OX=9606 GN=ARPC5 PE=1 SV=3)

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-09
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 0 

Query: 26  KIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDP 85
           +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD 
Sbjct: 41  EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDK 100

Query: 86  EYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSL 129
              D+LMKY+Y+G  +    +    L+ HEK     G+G I+R L
Sbjct: 101 NGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVL 145

[Close]
BLAST of Bhi04G001964 vs. ExPASy Swiss-Prot
Match: Q5R516 (Actin-related protein 2/3 complex subunit 5 OS=Pongo abelii OX=9601 GN=ARPC5 PE=2 SV=3)

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-09
Identity = 34/105 (32.38%), Postives = 56/105 (53.33%), Query Frame = 0 

Query: 26  KIESLLKQSRPVEALKTALEGSPPNTRDERCKSANWIVVHRALMAIK--DVDGMFSSLDP 85
           +++S L+Q     AL+ AL+  P NT+ +  K     +V + L++ K  D++    SLD 
Sbjct: 41  EVDSCLRQGNMTAALQAALKNPPINTKSQAVKDRAGSIVLKVLISFKANDIEKAVQSLDK 100

Query: 86  EYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSL 129
              D+LMKY+Y+G  +    +    L+ HEK     G+G I+R L
Sbjct: 101 NGVDLLMKYIYKGFESPSDNSSAMLLQWHEKALAAGGVGSIVRVL 145

[Close]
BLAST of Bhi04G001964 vs. ExPASy TrEMBL
Match: A0A1S3B407 (Actin-related protein 2/3 complex subunit 5 OS=Cucumis melo OX=3656 GN=LOC103485501 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 9.1e-69
Identity = 133/135 (98.52%), Postives = 134/135 (99.26%), Query Frame = 0 

Query: 1   MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSAN 60
           MATT EFVEADNAEAIITRIEHKSRKIESLLKQS+PVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MATTCEFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120
           WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG
Sbjct: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120

Query: 121 LGCILRSLADTINTV 136
           LGCILRSLADTINTV
Sbjct: 121 LGCILRSLADTINTV 135

[Close]
BLAST of Bhi04G001964 vs. ExPASy TrEMBL
Match: A0A6P4A354 (Actin-related protein 2/3 complex subunit 5 OS=Ziziphus jujuba OX=326968 GN=LOC107424250 PE=3 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 5.9e-68
Identity = 130/135 (96.30%), Postives = 133/135 (98.52%), Query Frame = 0 

Query: 1   MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSAN 60
           MA TGEFVEADNAEAIITRIEHKSRKIESLLKQ +PVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MAGTGEFVEADNAEAIITRIEHKSRKIESLLKQYKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120
           WIVVHRA+MAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG
Sbjct: 61  WIVVHRAIMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120

Query: 121 LGCILRSLADTINTV 136
           LGCILRSLADT+NTV
Sbjct: 121 LGCILRSLADTVNTV 135

[Close]
BLAST of Bhi04G001964 vs. ExPASy TrEMBL
Match: A0A6J1BVD6 (Actin-related protein 2/3 complex subunit 5 OS=Momordica charantia OX=3673 GN=LOC111006055 PE=3 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 7.7e-68
Identity = 131/135 (97.04%), Postives = 131/135 (97.04%), Query Frame = 0 

Query: 1   MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSAN 60
           MA   EFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MAAAAEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120
           WI VHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG
Sbjct: 61  WIAVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120

Query: 121 LGCILRSLADTINTV 136
           LGCILRSLADTINTV
Sbjct: 121 LGCILRSLADTINTV 135

[Close]
BLAST of Bhi04G001964 vs. ExPASy TrEMBL
Match: A0A0A0KD59 (Actin-related protein 2/3 complex subunit 5 OS=Cucumis sativus OX=3659 GN=Csa_6G008040 PE=3 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 1.3e-67
Identity = 130/135 (96.30%), Postives = 133/135 (98.52%), Query Frame = 0 

Query: 1   MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSAN 60
           MATT +FVEADNAEAIITRIEHKSRKIESLLKQ +PVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MATTCDFVEADNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120
           WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG
Sbjct: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120

Query: 121 LGCILRSLADTINTV 136
           LGCILRSLADT+NTV
Sbjct: 121 LGCILRSLADTVNTV 135

[Close]
BLAST of Bhi04G001964 vs. ExPASy TrEMBL
Match: W9R3V7 (Actin-related protein 2/3 complex subunit 5 OS=Morus notabilis OX=981085 GN=L484_021833 PE=3 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.2e-67
Identity = 130/135 (96.30%), Postives = 132/135 (97.78%), Query Frame = 0 

Query: 1   MATTGEFVEADNAEAIITRIEHKSRKIESLLKQSRPVEALKTALEGSPPNTRDERCKSAN 60
           MA T  FVEADNAEAIITRIEHKSRKIESLLKQS+PVEALKTALEGSPPNTRDERCKSAN
Sbjct: 1   MAGTDAFVEADNAEAIITRIEHKSRKIESLLKQSKPVEALKTALEGSPPNTRDERCKSAN 60

Query: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120
           WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG
Sbjct: 61  WIVVHRALMAIKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120

Query: 121 LGCILRSLADTINTV 136
           LGCILRSLADT+NTV
Sbjct: 121 LGCILRSLADTVNTV 135

The following BLAST results are available for this feature:
BLAST of Bhi04G001964 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G01710.11.6e-6289.23ARP2/3 complex 16 kDa subunit (p16-Arc) [more]
AT5G65274.11.3e-5678.52ARP2/3 complex 16 kDa subunit (p16-Arc) [more]
BLAST of Bhi04G001964 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M1172.3e-6189.23Actin-related protein 2/3 complex subunit 5A OS=Arabidopsis thaliana OX=3702 GN=... [more]
B3H6Y21.9e-5578.52Actin-related protein 2/3 complex subunit 5B OS=Arabidopsis thaliana OX=3702 GN=... [more]
Q6DE182.7e-0931.43Actin-related protein 2/3 complex subunit 5-B OS=Xenopus laevis OX=8355 GN=arpc5... [more]
O155112.7e-0932.38Actin-related protein 2/3 complex subunit 5 OS=Homo sapiens OX=9606 GN=ARPC5 PE=... [more]
Q5R5162.7e-0932.38Actin-related protein 2/3 complex subunit 5 OS=Pongo abelii OX=9601 GN=ARPC5 PE=... [more]
BLAST of Bhi04G001964 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3B4079.1e-6998.52Actin-related protein 2/3 complex subunit 5 OS=Cucumis melo OX=3656 GN=LOC103485... [more]
A0A6P4A3545.9e-6896.30Actin-related protein 2/3 complex subunit 5 OS=Ziziphus jujuba OX=326968 GN=LOC1... [more]
A0A6J1BVD67.7e-6897.04Actin-related protein 2/3 complex subunit 5 OS=Momordica charantia OX=3673 GN=LO... [more]
A0A0A0KD591.3e-6796.30Actin-related protein 2/3 complex subunit 5 OS=Cucumis sativus OX=3659 GN=Csa_6G... [more]
W9R3V72.2e-6796.30Actin-related protein 2/3 complex subunit 5 OS=Morus notabilis OX=981085 GN=L484... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036743Actin-related protein 2/3 complex subunit 5 superfamilyGENE3D1.25.40.190coord: 17..132
e-value: 4.4E-31
score: 109.4
IPR036743Actin-related protein 2/3 complex subunit 5 superfamilySUPERFAMILY69103Arp2/3 complex 16 kDa subunit ARPC5coord: 6..131
IPR006789Actin-related protein 2/3 complex subunit 5PFAMPF04699P16-Arccoord: 11..131
e-value: 2.3E-22
score: 80.0
IPR006789Actin-related protein 2/3 complex subunit 5PANTHERPTHR12644ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARCcoord: 5..133
NoneNo IPR availablePANTHERPTHR12644:SF0ACTIN-RELATED PROTEIN 2/3 COMPLEX SUBUNIT 5coord: 5..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001964Bhi04M001964mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0034314 Arp2/3 complex-mediated actin nucleation
biological_process GO:0030833 regulation of actin filament polymerization
cellular_component GO:0005885 Arp2/3 protein complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0015629 actin cytoskeleton
molecular_function GO:0051015 actin filament binding