Bhi04G001946 (gene) Wax gourd (B227) v1

Overview
NameBhi04G001946
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionthylakoid lumenal 15 kDa protein 1, chloroplastic
Locationchr4: 65076015 .. 65080462 (-)
RNA-Seq ExpressionBhi04G001946
SyntenyBhi04G001946
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAAGATATGAGCAGCAGCACAAAAACGCAACTCATAATCCGTTTCCAGATTATGCTGTGCGGTCGGTCACATTATCCAATTCGAAAAAAGCCACCAAAACAATTCTGGGCTCAATTGCAGCCACCTTCACCAAATGGCTTTGCTCAACGCTTCATTATGTTGTTCTTCCACTTCCCGAATTCCTTCCAGACCTCACCTTCCTCTTCCTCTCTCCGTTGCCGCCCATTCCTCACCTCTCCCACTTTCTTCTCCTTTCTCCTCAATTCCTTTCATTTCAACCACAAATATGAAGGTATTCAACCAACAATTGGAAGCTACGCGGCATTTGGTTCTTTCCCTTGGTGAATCCGCCTCAAAAGCCTCCTTCCTCGCTTTCCTTTCCGCCTCTTTGTTCCTCGCCGACCCTGCCCTAGCTTTCAAGGTTAATTTCCTCCCGAGATTGTTCATAGCTACATTGTATGAGAATCTATTTTGATTGTTACGTCTGTGTGTATTGTATGGCTGATTGATTTTTGGCGAACGGATTCAATTTCGTAATTAGGGCGGAGGTCCTTATGGCGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTTGGAAGACGTTAATCAAGCAAGATTTCAAAACGGTTTCATCTAAATTCACTATTTCAAATCTTGTACATGTACTATTGTAATATGTGTTTGTGACATTGCCTTTTTTGTTTCTTTTTTATTAGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCGAAGTTATTAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTTCATTATTTCTATGTTTTAAGTAATGTTATGAACTTTCCAAGTCATCTTCAGGATCTTCTCTTATGACATGGCGAGCACAATCCTATTAAACCTGACTTCAATTCTTTCTCTCCTTGCCTAATTGTTAGGGGCGGATCTTTCAGATGCTGATCTTAGAGGTGCAGACTTTTCTTTGGCCAATGTTACCAAGGTGATGATTCTTTGATAGGCTTTCAATTAAATGCTTTCTTATTTAACCTCTAATTTGCCCCTTCTCAAATTTTCAAATTTAAAAGTTAGGAGGCCAAATTTTCCAATCTCGTTCTTGAATGTTTAAAGATTTGATCGAAGTCAAGTAAAATATGATAGGAAACTAGTCTACAAAAAGTAGGAGTGAGCAAACCAAACGGGCCAAACTGACATTGGTTGGTCGGTAGTGAAAATTTTGGTCGGAGTCAGGTTTTTGTAAATAAAAAACCGAAGTTCAATTGGTGTGAGTGGTAGGAAAGGACAACAACCGATAATGTTGGTGGTCGGCCTTGGTTTTAGCCCAAAACCGAGGTTGACCAACTGATGATCACTTCTAGCAAAAAGTATTGATGTGATACGATAAATTTGAACTGTGTATGCAGTTCGAGATGTAGAGCAACCTGCAGTTTTTTATCTGAGATTTTATATCAAAGTTTTGGTACATTATGAGCCTTGATGTTAGAAGACATTGAAATTATAACTTTACTTATCCTCACTGGTTGGTTTTTTCTGCTTTGGGCAGGCAAATTTAAGCAATGCCAACTTAGAAGGTGCACTTGCCACAGGAAATACCTCTTTCCGTGGATCAACAATAAACGGAGCTGGTATGTAAACCCAACATTTACGTAGCTTTTAGTATTTCATTGGGATCCTCTCATCTCCAAAACTGTTTTAGATGCCATAATACATGTCTCTCTATCTTTCATAAGATCGAAATTCTACAATTCTAGCTTTGCAATTAGCTGAAAGAGTTCTAGGAAATTGTAATTGAAGAGATTATAGAAGAACCGATGATAGAGTGGTGATACGAAGAAATACTTAATTTACCTCATGATGTCAGACTTCACAGACGTGCCTTTGAGAGAGGATCAGCGGGAGTACCTTTGCAAAGTTGCAGATGGGTAAAGACAAATTCTTCTGTTTCTTAGGTTGACATTAAATGATTCATGATAAATAAACTAGGAAACTTAGTCATTTTTGTTTACAGGGTGAACCCAACAACTGGAAATGCAACCCGGGAGACCCTGCTCTGTGATTGAGACTTGAATTATAAGAGAAAGCTATTGAGGTACAAGAACTGTATAGATCAACTTAAAAATGTAAAGTTCTTAATAACCATATCAGTATCCAATCCATTGAGTTCAATTTTGTCAATCATCTGTTTATGTCATACCATGTGGTTTGTCGATATCATAAAGCTTAACGTAAGTAGCAGAATCTAAGAATCAGAACACGTTGGATTTCTTGGCTATTGAATTCAACATCCAGATGGTTTACAAACGGGCCCCGTTAAAGAAAATTAAATTGATTTTACAAGACATAGGATTTGAAGAACAGGAACCATAATTAGAAACCACTAGGATTTTCCGTCACTACCCAGTTGGTAATTTTTACTTCAACCCACTAATACCAGGAGCAGAAGTTGCTAAAGCTCCACTACAAACTACAAAGTGCACATGGTTAAAATGATCGACTTCCCCCATCCAATTTTTTATTGTTTATACCACTCCAGAAAAATTGTCTTTATCAACTTTAATAATGCACTAGATTTTGTCTTACCCACTTAGCAAATGGTTATTAGAATGCGACTTTAATATTGTCATCTCTGTTACAGTCTTACCAACTAGATTAACATCCTCCTCAAAAACTGGTTCTGTTGAATATACTGATATTTTTCTATATCACTGTGATATTTACAAGAGGGAAAATCAGCCATCATCATTCTAGGGCCTAAAACAATTCATCCAAAAATGAGAATCTATGTGGTAATTGTTTCGCTCTTTCTGCATTTCCTAATCCTAACCCAGATATTATTATCGTTTCCCCACCTGTCATTAATCTCGCAACACTGTCTTTGCGGTGCCTGTACAAATCAAATAGAAACCATCAATGACATGGAGGAATGAATGAGAATATTATAAATGATTGTGTTAAGAGGGAGAGAGAGATTACCTTCATCCATAGCTGAGTCTCCATCTTCATTGAGGAGACAGTAACTTGTTTCACTGCCATGACCCGTGCATAATCATCCCTCTCGCATACTTTTTCTCCCTTGGCCACGTACCTTTCGTAAGTGGTTTTGGTACCCCTTGTGTCCACCTCTTGAACTTGCTTCAGAAAATAAACAACCGCTCGCCGGCACGGGTCAGAACTCATAGGTCGTGTATTGAAGTCGAATGGACCATTGCTCCAGCTTCTCCATGTCTTGAACGTCTGAAATGGAATTTGCATATCTGTGGCTGTCACCATGAAAGGATATATCTGAACAGTGTAGCCCCACGCGATGGAGATGGACCATTTTTTCCTCCGATCATAGCAGACAGTTTGCTGAAGAATTCGGCTCGAGTCAACTTGATATGCTTGCATAAGTAAATTCAATGAATCAATCCTAGTTTGGTTAGGAAACAATGGCTCCACATGGTCAAGGTGATGAAGCGATACAAGTGGTGCCAATGGATGTGCTGCCAAAATCCCATATGGGTTACCTCTAATATCAAACTGCACGAATTTAACACATCAGTCCATGTGTATAACTCGTGTAAACATTTTTTATCTATATTTATGACAACACATGGAATTCAGAATTTAAATCCCCAACCTTAGAAAAGATAAGATAAATAAATTGTTATTGAGTTATGCTTACTTTGACGAAATTTATCTGTTATATATACAATTTTACATTATGGTATATTTTTATTACTCAAGTAGTAAGATGGGCCAAAAGGCTGAATGATATAAATTTGAGGATTGACCTGAAAAGTAGGACCTGAAAGTGAGGGGCCGAAGAATAGTACAATAAAGCTCAGTAGCTTACACAATCAGTTGAAAGCTTAGTAGCTTACACAATCATAAAAGATGAAGTCGACAACGACAACTTTCAAGGTCCTTCAATCCTCACCCCACGGATACAATACGGAGAAAATGGTCTATTGACCTTCTTGCCACCTATAACAAAACTACTTTTTCTTTCACCTTCACCTAAATTTTCCAATACGTCATCGAGAAAATTTTCATTACTACGAAAGTATGAAAAGATTTCCAACCATGTCAAAATAGGGCGTAACTCATTGACATAGATGTGAGGTCCATTAGTGTTTATGAAGTCAAATATATTGTATAAACAAATGAATTATGATACCCGTTTTCTGTTTTAACATCTCTCCTCATGTACTTTTCTTACATTTATTTATTAAGAAACGTCCTAAATCATCTAAACTCAAATCTACTTATGTTAAATTTCTAAGGATAGTTACAAATATAACAATTAAGTCTAAAATATTTGTAGATATAACACGATGCAAAAGATTTGTAGATATAACAAAATTAATATTTTACTTTCAAAGGTTTATAAGTAATAGATTATATCGTTAGTAAGGAATCTATCCGTGATAAACTATATTACTGATAAGATAGAG

mRNA sequence

GTAAGATATGAGCAGCAGCACAAAAACGCAACTCATAATCCGTTTCCAGATTATGCTGTGCGGTCGGTCACATTATCCAATTCGAAAAAAGCCACCAAAACAATTCTGGGCTCAATTGCAGCCACCTTCACCAAATGGCTTTGCTCAACGCTTCATTATGTTGTTCTTCCACTTCCCGAATTCCTTCCAGACCTCACCTTCCTCTTCCTCTCTCCGTTGCCGCCCATTCCTCACCTCTCCCACTTTCTTCTCCTTTCTCCTCAATTCCTTTCATTTCAACCACAAATATGAAGGTATTCAACCAACAATTGGAAGCTACGCGGCATTTGGTTCTTTCCCTTGGTGAATCCGCCTCAAAAGCCTCCTTCCTCGCTTTCCTTTCCGCCTCTTTGTTCCTCGCCGACCCTGCCCTAGCTTTCAAGGGCGGAGGTCCTTATGGCGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTTGGAAGACGTTAATCAAGCAAGATTTCAAAACGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCGAAGTTATTAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGGGCGGATCTTTCAGATGCTGATCTTAGAGGTGCAGACTTTTCTTTGGCCAATGTTACCAAGGCAAATTTAAGCAATGCCAACTTAGAAGGTGCACTTGCCACAGGAAATACCTCTTTCCGTGGATCAACAATAAACGGAGCTGACTTCACAGACGTGCCTTTGAGAGAGGATCAGCGGGAGTACCTTTGCAAAGTTGCAGATGGGGTGAACCCAACAACTGGAAATGCAACCCGGGAGACCCTGCTCTGTGATTGAGACTTGAATTATAAGAGAAAGCTATTGAGGTACAAGAACTGTATAGATCAACTTAAAAATGTAAAGTTCTTAATAACCATATCAGTATCCAATCCATTGAGTTCAATTTTGTCAATCATCTGTTTATGTCATACCATGTGGTTTGTCGATATCATAAAGCTTAACGTAAGTAGCAGAATCTAAGAATCAGAACACGTTGGATTTCTTGGCTATTGAATTCAACATCCAGATGGTTTACAAACGGGCCCCGTTAAAGAAAATTAAATTGATTTTACAAGACATAGGATTTGAAGAACAGGAACCATAATTAGAAACCACTAGGATTTTCCGTCACTACCCAGTTGGTAATTTTTACTTCAACCCACTAATACCAGGAGCAGAAGTTGCTAAAGCTCCACTACAAACTACAAAGTGCACATGGTTAAAATGATCGACTTCCCCCATCCAATTTTTTATTGTTTATACCACTCCAGAAAAATTGTCTTTATCAACTTTAATAATGCACTAGATTTTGTCTTACCCACTTAGCAAATGGTTATTAGAATGCGACTTTAATATTGTCATCTCTGTTACAGTCTTACCAACTAGATTAACATCCTCCTCAAAAACTGGTTCTGTTGAATATACTGATATTTTTCTATATCACTGTGATATTTACAAGAGGGAAAATCAGCCATCATCATTCTAGGGCCTAAAACAATTCATCCAAAAATGAGAATCTATGTGGTAATTGTTTCGCTCTTTCTGCATTTCCTAATCCTAACCCAGATATTATTATCGTTTCCCCACCTGTCATTAATCTCGCAACACTGTCTTTGCGGTGCCTGTACAAATCAAATAGAAACCATCAATGACATGGAGGAATGAATGAGAATATTATAAATGATTGTGTTAAGAGGGAGAGAGAGATTACCTTCATCCATAGCTGAGTCTCCATCTTCATTGAGGAGACAGTAACTTGTTTCACTGCCATGACCCGTGCATAATCATCCCTCTCGCATACTTTTTCTCCCTTGGCCACGTACCTTTCGTAAGTGGTTTTGGTACCCCTTGTGTCCACCTCTTGAACTTGCTTCAGAAAATAAACAACCGCTCGCCGGCACGGGTCAGAACTCATAGGTCGTGTATTGAAGTCGAATGGACCATTGCTCCAGCTTCTCCATGTCTTGAACGTCTGAAATGGAATTTGCATATCTGTGGCTGTCACCATGAAAGGATATATCTGAACAGTGTAGCCCCACGCGATGGAGATGGACCATTTTTTCCTCCGATCATAGCAGACAGTTTGCTGAAGAATTCGGCTCGAGTCAACTTGATATGCTTGCATAAGTAAATTCAATGAATCAATCCTAGTTTGGTTAGGAAACAATGGCTCCACATGGTCAAGGTGATGAAGCGATACAAGTGGTGCCAATGGATGTGCTGCCAAAATCCCATATGGGTTACCTCTAATATCAAACTGCACGAATTTAACACATCAGTCCATGTGTATAACTCGTGTAAACATTTTTTATCTATATTTATGACAACACATGGAATTCAGAATTTAAATCCCCAACCTTAGAAAAGATAAGATAAATAAATTGTTATTGAGTTATGCTTACTTTGACGAAATTTATCTGTTATATATACAATTTTACATTATGGTATATTTTTATTACTCAAGTAGTAAGATGGGCCAAAAGGCTGAATGATATAAATTTGAGGATTGACCTGAAAAGTAGGACCTGAAAGTGAGGGGCCGAAGAATAGTACAATAAAGCTCAGTAGCTTACACAATCAGTTGAAAGCTTAGTAGCTTACACAATCATAAAAGATGAAGTCGACAACGACAACTTTCAAGGTCCTTCAATCCTCACCCCACGGATACAATACGGAGAAAATGGTCTATTGACCTTCTTGCCACCTATAACAAAACTACTTTTTCTTTCACCTTCACCTAAATTTTCCAATACGTCATCGAGAAAATTTTCATTACTACGAAAGTATGAAAAGATTTCCAACCATGTCAAAATAGGGCGTAACTCATTGACATAGATGTGAGGTCCATTAGTGTTTATGAAGTCAAATATATTGTATAAACAAATGAATTATGATACCCGTTTTCTGTTTTAACATCTCTCCTCATGTACTTTTCTTACATTTATTTATTAAGAAACGTCCTAAATCATCTAAACTCAAATCTACTTATGTTAAATTTCTAAGGATAGTTACAAATATAACAATTAAGTCTAAAATATTTGTAGATATAACACGATGCAAAAGATTTGTAGATATAACAAAATTAATATTTTACTTTCAAAGGTTTATAAGTAATAGATTATATCGTTAGTAAGGAATCTATCCGTGATAAACTATATTACTGATAAGATAGAG

Coding sequence (CDS)

ATGGCTTTGCTCAACGCTTCATTATGTTGTTCTTCCACTTCCCGAATTCCTTCCAGACCTCACCTTCCTCTTCCTCTCTCCGTTGCCGCCCATTCCTCACCTCTCCCACTTTCTTCTCCTTTCTCCTCAATTCCTTTCATTTCAACCACAAATATGAAGGTATTCAACCAACAATTGGAAGCTACGCGGCATTTGGTTCTTTCCCTTGGTGAATCCGCCTCAAAAGCCTCCTTCCTCGCTTTCCTTTCCGCCTCTTTGTTCCTCGCCGACCCTGCCCTAGCTTTCAAGGGCGGAGGTCCTTATGGCGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTTGGAAGACGTTAATCAAGCAAGATTTCAAAACGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCGAAGTTATTAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGGGCGGATCTTTCAGATGCTGATCTTAGAGGTGCAGACTTTTCTTTGGCCAATGTTACCAAGGCAAATTTAAGCAATGCCAACTTAGAAGGTGCACTTGCCACAGGAAATACCTCTTTCCGTGGATCAACAATAAACGGAGCTGACTTCACAGACGTGCCTTTGAGAGAGGATCAGCGGGAGTACCTTTGCAAAGTTGCAGATGGGGTGAACCCAACAACTGGAAATGCAACCCGGGAGACCCTGCTCTGTGATTGA

Protein sequence

MALLNASLCCSSTSRIPSRPHLPLPLSVAAHSSPLPLSSPFSSIPFISTTNMKVFNQQLEATRHLVLSLGESASKASFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSWKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD
Homology
[Close]
BLAST of Bhi04G001946 vs. TAIR 10
Match: AT2G44920.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 282.0 bits (720), Expect = 4.6e-76
Identity = 163/237 (68.78%), Postives = 179/237 (75.53%), Query Frame = 0 

Query: 3   LLNASL--CCSSTSRIPSRPHLPLPLSVAAHSSPLPLSSPFSSIPFISTTNMKVFNQQLE 62
           L N SL  CC+    I  +P L  P S ++H  P+  S         S    +V    L 
Sbjct: 4   LSNVSLFSCCN----ISQKPSLFSPSSRSSH-CPIRCSQ--------SQEGKEVVTSPL- 63

Query: 63  ATRHLVLSLGESASKASFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSWKT 122
             R +V SLGE  SK S  A +SASLF  DPALAFKGGGPYG GVTRGQDLSGKDFS +T
Sbjct: 64  --RSVVWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQT 123

Query: 123 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 182
           LI+QDFKTSILRQANFKGAKLLGASFFDADLTGADLS+ADLRGADFSLANVTK NL+NAN
Sbjct: 124 LIRQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNAN 183

Query: 183 LEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 238
           LEGA  TGNTSF+GS I GADFTDVPLR+DQR YLCKVADGVN TTGNATR+TLLC+
Sbjct: 184 LEGATVTGNTSFKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLCN 224

[Close]
BLAST of Bhi04G001946 vs. TAIR 10
Match: AT2G44920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 213.8 bits (543), Expect = 1.5e-55
Identity = 131/200 (65.50%), Postives = 144/200 (72.00%), Query Frame = 0 

Query: 3   LLNASL--CCSSTSRIPSRPHLPLPLSVAAHSSPLPLSSPFSSIPFISTTNMKVFNQQLE 62
           L N SL  CC+    I  +P L  P S ++H  P+  S         S    +V    L 
Sbjct: 4   LSNVSLFSCCN----ISQKPSLFSPSSRSSH-CPIRCSQ--------SQEGKEVVTSPL- 63

Query: 63  ATRHLVLSLGESASKASFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSWKT 122
             R +V SLGE  SK S  A +SASLF  DPALAFKGGGPYG GVTRGQDLSGKDFS +T
Sbjct: 64  --RSVVWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQT 123

Query: 123 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 182
           LI+QDFKTSILRQANFKGAKLLGASFFDADLTGADLS+ADLRGADFSLANVTK NL+NAN
Sbjct: 124 LIRQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNAN 183

Query: 183 LEGALATGNTSFRGSTINGA 201
           LEGA  TGNTSF+GS I GA
Sbjct: 184 LEGATVTGNTSFKGSNITGA 187

[Close]
BLAST of Bhi04G001946 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 62.0 bits (149), Expect = 7.4e-10
Identity = 56/166 (33.73%), Postives = 80/166 (48.19%), Query Frame = 0 

Query: 73  ASKASFLAFLSASLFLADPALAFKGG--GPYGAGVTRGQDLSGKDFSWKTLIKQDFKTSI 132
           AS +   A    + F AD    F  G    YG+        S ++F        D + S 
Sbjct: 81  ASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESD 140

Query: 133 LRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNT 192
              + F GA L  A  + A+ +GADLSD  +   D  + N  +ANL+NA L  ++ T  +
Sbjct: 141 FSGSTFNGAYLEKAVAYKANFSGADLSDTLM---DRMVLN--EANLTNAVLVRSVLT-RS 200

Query: 193 SFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 237
              G+ I GADF+D  +   Q++ LCK A G NP TG  TR++L C
Sbjct: 201 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

[Close]
BLAST of Bhi04G001946 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 62.0 bits (149), Expect = 7.4e-10
Identity = 56/166 (33.73%), Postives = 80/166 (48.19%), Query Frame = 0 

Query: 73  ASKASFLAFLSASLFLADPALAFKGG--GPYGAGVTRGQDLSGKDFSWKTLIKQDFKTSI 132
           AS +   A    + F AD    F  G    YG+        S ++F        D + S 
Sbjct: 7   ASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESD 66

Query: 133 LRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNT 192
              + F GA L  A  + A+ +GADLSD  +   D  + N  +ANL+NA L  ++ T  +
Sbjct: 67  FSGSTFNGAYLEKAVAYKANFSGADLSDTLM---DRMVLN--EANLTNAVLVRSVLT-RS 126

Query: 193 SFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 237
              G+ I GADF+D  +   Q++ LCK A G NP TG  TR++L C
Sbjct: 127 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 166

[Close]
BLAST of Bhi04G001946 vs. TAIR 10
Match: AT5G55000.2 (potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein )

HSP 1 Score: 56.2 bits (134), Expect = 4.1e-08
Identity = 42/111 (37.84%), Postives = 53/111 (47.75%), Query Frame = 0 

Query: 107 RGQDLSGKDFSWKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADF 166
           R  D  G  F    L + +F ++ LR A   G  L  A+  DA L G     ADLR A  
Sbjct: 174 RNADAEGSIFHNAILRECEFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHL 233

Query: 167 SLANVTKANLSNANLEGALATG----NTSFRGSTINGADFTDVPLREDQRE 214
             A++T ANL  ANLEGA   G    N +F+G+ +  A    V LRE   E
Sbjct: 234 QNADLTNANLEGANLEGANLKGAKLSNANFKGANLQRAYLRHVNLREAHME 284

[Close]
BLAST of Bhi04G001946 vs. ExPASy Swiss-Prot
Match: O22160 (Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g44920 PE=1 SV=2)

HSP 1 Score: 282.0 bits (720), Expect = 6.4e-75
Identity = 163/237 (68.78%), Postives = 179/237 (75.53%), Query Frame = 0 

Query: 3   LLNASL--CCSSTSRIPSRPHLPLPLSVAAHSSPLPLSSPFSSIPFISTTNMKVFNQQLE 62
           L N SL  CC+    I  +P L  P S ++H  P+  S         S    +V    L 
Sbjct: 4   LSNVSLFSCCN----ISQKPSLFSPSSRSSH-CPIRCSQ--------SQEGKEVVTSPL- 63

Query: 63  ATRHLVLSLGESASKASFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSWKT 122
             R +V SLGE  SK S  A +SASLF  DPALAFKGGGPYG GVTRGQDLSGKDFS +T
Sbjct: 64  --RSVVWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQT 123

Query: 123 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 182
           LI+QDFKTSILRQANFKGAKLLGASFFDADLTGADLS+ADLRGADFSLANVTK NL+NAN
Sbjct: 124 LIRQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNAN 183

Query: 183 LEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 238
           LEGA  TGNTSF+GS I GADFTDVPLR+DQR YLCKVADGVN TTGNATR+TLLC+
Sbjct: 184 LEGATVTGNTSFKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLCN 224

[Close]
BLAST of Bhi04G001946 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.8e-13
Identity = 54/126 (42.86%), Postives = 69/126 (54.76%), Query Frame = 0 

Query: 111 LSGKDFSWKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN 170
           L G+DFS K+L    F  + L  +NF  A L GA F  + L GADL  ADL      L +
Sbjct: 54  LIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTS 113

Query: 171 VTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNAT 230
              A+L+NA L  A+    T F  + I GADF+   L   + + LC  ADGVNP TG +T
Sbjct: 114 FKGADLTNAVLTEAIMM-RTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVST 173

Query: 231 RETLLC 237
           RE+L C
Sbjct: 174 RESLGC 178

[Close]
BLAST of Bhi04G001946 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 56/166 (33.73%), Postives = 80/166 (48.19%), Query Frame = 0 

Query: 73  ASKASFLAFLSASLFLADPALAFKGG--GPYGAGVTRGQDLSGKDFSWKTLIKQDFKTSI 132
           AS +   A    + F AD    F  G    YG+        S ++F        D + S 
Sbjct: 81  ASSSGVPAMAELNRFEADTRGEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESD 140

Query: 133 LRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNANLEGALATGNT 192
              + F GA L  A  + A+ +GADLSD  +   D  + N  +ANL+NA L  ++ T  +
Sbjct: 141 FSGSTFNGAYLEKAVAYKANFSGADLSDTLM---DRMVLN--EANLTNAVLVRSVLT-RS 200

Query: 193 SFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 237
              G+ I GADF+D  +   Q++ LCK A G NP TG  TR++L C
Sbjct: 201 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

[Close]
BLAST of Bhi04G001946 vs. ExPASy Swiss-Prot
Match: Q9SE95 (FH protein interacting protein FIP2 OS=Arabidopsis thaliana OX=3702 GN=FIP2 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.7e-07
Identity = 42/111 (37.84%), Postives = 53/111 (47.75%), Query Frame = 0 

Query: 107 RGQDLSGKDFSWKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADF 166
           R  D  G  F    L + +F ++ LR A   G  L  A+  DA L G     ADLR A  
Sbjct: 174 RNADAEGSIFHNAILRECEFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHL 233

Query: 167 SLANVTKANLSNANLEGALATG----NTSFRGSTINGADFTDVPLREDQRE 214
             A++T ANL  ANLEGA   G    N +F+G+ +  A    V LRE   E
Sbjct: 234 QNADLTNANLEGANLEGANLKGAKLSNANFKGANLQRAYLRHVNLREAHME 284

[Close]
BLAST of Bhi04G001946 vs. ExPASy Swiss-Prot
Match: P73709 (Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1819 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.3e-06
Identity = 33/96 (34.38%), Postives = 55/96 (57.29%), Query Frame = 0 

Query: 107 RGQDLSGKDFSWKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADF 166
           +G DLS  D S+  L + + +   LR+A+   A L GA   DA+L+GA L+ ADL+ A+ 
Sbjct: 164 KGVDLSRADLSYANLKEANLRDVDLRKADLSYANLKGALLTDANLSGAKLNGADLQNANL 223

Query: 167 SLANVTKANLSNANLEGALAT----GNTSFRGSTIN 199
             A +++A ++  N +GA+ T      T+  GS ++
Sbjct: 224 MRAKISEAEMTAVNCQGAIMTHVNLNRTNLTGSNLS 259

[Close]
BLAST of Bhi04G001946 vs. ExPASy TrEMBL
Match: A0A6J1GWM1 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457530 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.8e-97
Identity = 199/237 (83.97%), Postives = 208/237 (87.76%), Query Frame = 0 

Query: 1   MALLNASLCCSSTSRIPSRPHLPLPLSVAAHSSPLPLSSPFSSIPFISTTNMKVFNQQLE 60
           MALLNASL CSST RIPSRPHLPLP SV+A S+P                  +V   Q+E
Sbjct: 1   MALLNASL-CSSTCRIPSRPHLPLPPSVSAFSNP------------------QVMKHQVE 60

Query: 61  ATRHLVLSLGESASKASFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSWKT 120
           ATR+ VLS+GESASKASFLA +SASLFLADPALAFKGGGPYGAGVTRGQDL+GKDFS KT
Sbjct: 61  ATRNFVLSVGESASKASFLALISASLFLADPALAFKGGGPYGAGVTRGQDLTGKDFSGKT 120

Query: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 180
           LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN
Sbjct: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 180

Query: 181 LEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 238
           LEGALATGNTSFRGS INGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 181 LEGALATGNTSFRGSIINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]
BLAST of Bhi04G001946 vs. ExPASy TrEMBL
Match: A0A6J1BVJ8 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006104 PE=4 SV=1)

HSP 1 Score: 363.6 bits (932), Expect = 6.2e-97
Identity = 197/237 (83.12%), Postives = 207/237 (87.34%), Query Frame = 0 

Query: 1   MALLNASLCCSSTSRIPSRPHLPLPLSVAAHSSPLPLSSPFSSIPFISTTNMKVFNQQLE 60
           MALLNASLCC STSRIP  PHL LP S++AH +P                   V  QQLE
Sbjct: 1   MALLNASLCC-STSRIPPAPHLHLPPSISAHPTP------------------PVLKQQLE 60

Query: 61  ATRHLVLSLGESASKASFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSWKT 120
           A+R+L+LS+GESASKA+FLA LSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFS KT
Sbjct: 61  ASRNLILSVGESASKATFLALLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKT 120

Query: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 180
           LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN
Sbjct: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 180

Query: 181 LEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 238
           LEGALATGNTSFRGSTI GADFTDVPLREDQREYLCKVADGVNPTTGNATR+TLLC+
Sbjct: 181 LEGALATGNTSFRGSTIEGADFTDVPLREDQREYLCKVADGVNPTTGNATRDTLLCN 218

[Close]
BLAST of Bhi04G001946 vs. ExPASy TrEMBL
Match: A0A6J1GU31 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457530 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 8.1e-97
Identity = 198/237 (83.54%), Postives = 207/237 (87.34%), Query Frame = 0 

Query: 1   MALLNASLCCSSTSRIPSRPHLPLPLSVAAHSSPLPLSSPFSSIPFISTTNMKVFNQQLE 60
           MALLNASL CSST RIPSRPHLPLP SV+A S+P                  +    Q+E
Sbjct: 1   MALLNASL-CSSTCRIPSRPHLPLPPSVSAFSNP------------------QTMKHQVE 60

Query: 61  ATRHLVLSLGESASKASFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSWKT 120
           ATR+ VLS+GESASKASFLA +SASLFLADPALAFKGGGPYGAGVTRGQDL+GKDFS KT
Sbjct: 61  ATRNFVLSVGESASKASFLALISASLFLADPALAFKGGGPYGAGVTRGQDLTGKDFSGKT 120

Query: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 180
           LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN
Sbjct: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 180

Query: 181 LEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 238
           LEGALATGNTSFRGS INGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 181 LEGALATGNTSFRGSIINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]
BLAST of Bhi04G001946 vs. ExPASy TrEMBL
Match: A0A6J1JKT4 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487791 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 4.0e-96
Identity = 197/237 (83.12%), Postives = 206/237 (86.92%), Query Frame = 0 

Query: 1   MALLNASLCCSSTSRIPSRPHLPLPLSVAAHSSPLPLSSPFSSIPFISTTNMKVFNQQLE 60
           MALLNASL CSST RIPSR HLPLP S+ A S+P                  +V   Q+E
Sbjct: 1   MALLNASL-CSSTCRIPSRSHLPLPPSIPAFSNP------------------RVMKHQVE 60

Query: 61  ATRHLVLSLGESASKASFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSWKT 120
           ATR+ VLS+GESASKASFLA +SASLFLADPALAFKGGGPYGAGVTRGQDL+GKDFS KT
Sbjct: 61  ATRNFVLSVGESASKASFLALISASLFLADPALAFKGGGPYGAGVTRGQDLTGKDFSGKT 120

Query: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 180
           LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN
Sbjct: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 180

Query: 181 LEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 238
           LEGALATGNTSFRGS INGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 181 LEGALATGNTSFRGSIINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 218

[Close]
BLAST of Bhi04G001946 vs. ExPASy TrEMBL
Match: A0A6J1JPS6 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487791 PE=4 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 1.2e-95
Identity = 196/237 (82.70%), Postives = 205/237 (86.50%), Query Frame = 0 

Query: 1   MALLNASLCCSSTSRIPSRPHLPLPLSVAAHSSPLPLSSPFSSIPFISTTNMKVFNQQLE 60
           MALLNASL CSST RIPSR HLPLP S+ A S+P                  +    Q+E
Sbjct: 1   MALLNASL-CSSTCRIPSRSHLPLPPSIPAFSNP------------------RAMKHQVE 60

Query: 61  ATRHLVLSLGESASKASFLAFLSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSWKT 120
           ATR+ VLS+GESASKASFLA +SASLFLADPALAFKGGGPYGAGVTRGQDL+GKDFS KT
Sbjct: 61  ATRNFVLSVGESASKASFLALISASLFLADPALAFKGGGPYGAGVTRGQDLTGKDFSGKT 120

Query: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 180
           LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN
Sbjct: 121 LIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLSNAN 180

Query: 181 LEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 238
           LEGALATGNTSFRGS INGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC+
Sbjct: 181 LEGALATGNTSFRGSIINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCN 218

The following BLAST results are available for this feature:
BLAST of Bhi04G001946 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G44920.24.6e-7668.78Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G44920.11.5e-5565.50Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G12250.17.4e-1033.73Pentapeptide repeat-containing protein [more]
AT1G12250.27.4e-1033.73Pentapeptide repeat-containing protein [more]
AT5G55000.24.1e-0837.84potassium channel tetramerisation domain-containing protein / pentapeptide repea... [more]
BLAST of Bhi04G001946 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O221606.4e-7568.78Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
B1WVN51.8e-1342.86Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ... [more]
Q8H1Q11.0e-0833.73Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ... [more]
Q9SE955.7e-0737.84FH protein interacting protein FIP2 OS=Arabidopsis thaliana OX=3702 GN=FIP2 PE=1... [more]
P737096.3e-0634.38Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ... [more]
BLAST of Bhi04G001946 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GWM12.8e-9783.97thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita moscha... [more]
A0A6J1BVJ86.2e-9783.12thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Momordica charan... [more]
A0A6J1GU318.1e-9783.54thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Cucurbita moscha... [more]
A0A6J1JKT44.0e-9683.12thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita maxima... [more]
A0A6J1JPS61.2e-9582.70thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Cucurbita maxima... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.80coord: 94..237
e-value: 6.4E-46
score: 157.1
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 106..208
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 129..167
e-value: 1.3E-12
score: 47.1
IPR044213Thylakoid lumenal 15kDa protein 1-likePANTHERPTHR47200THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTICcoord: 47..237

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001946Bhi04M001946mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009534 chloroplast thylakoid