Bhi04G001933 (gene) Wax gourd (B227) v1

Overview


Name	Bhi04G001933
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	GRF1-interacting factor 3-like
Location	chr4: 64745152 .. 64748951 (+)
RNA-Seq Expression	Bhi04G001933
Synteny	Bhi04G001933

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCCATCAAATTTCAGTGTGAACGTAAAAATGAAACCTAACCAATATTTTTTTTCTCCTGAAATTAAAAAAAAAAAAAAAAACGAAACCTTCATGAAATTTTCTATTTTCTATGTCCTCTTTGGCTCTTTCTTGCATTTCCTTCTTCTCCGTACGCAGCACTGATTAAATTATTTTTCTTTTAAATTGTTTTTTAACATCACAACTTTCCTTTTTTTCTAAACCCTATTTCACGTTCAGCCACCCCCTTCCTCCCATTATCAGCCCCGCCGCTCGCCGCCCGTCGCACCCCACACGCCGTCTCAGCAGCTGCCGCTGTCTCAGCCTTCCCACGAAATCGCAGCCGCTCCCTCCCTCTCACACTCTCTCGACTCCGAGCAATCAGAGTTACTTATCACCGTTTATTATTTGTCACATACACATTGGTTCACCGCGCTAGTGAGATCGCGCCGCCGCTACTTCTTTTTCAGATCCCAAGGTTTTATTTTCTGTTTTTGTTTTGTTTGCTTGGTTATGTTGGTCTAGAATATTTTCTTTTTGTTAATTTGTTCTTCAATCGATGTTCAACCACCCTAACTGAAAACGTAATCCTAAGAATATATACCTTACAAACTAGAGAGAAAAACAGATTGAATTAATAAATAAAAAGGAACAAAATATATCATTCTTATCAACAAAATAGAAAATTGATCATGAGTTTGAGTTTGATTGAACTATCGATGCTTATGAACTAGCATAGGTAGACGATTGCATATGAATTGGCTAGGTATAAATAAATAAATAAATAAATAAACTCTTATGGGGTAGAATTAGAAACAGGATTTGACCTATTCAGGGGTTCCAAACAGGGGGCAAACCTCAGGAACCTATTTTAATGTTGCAGGTTTTCTCTCTTCTTGCTTCTGGGTCTTCCTTTATTATTATTGTTATTCTTATTACTACTATTATTTGCCTATCTTCTCAATCTCTTCTGACTTGGGAAATTACTTTTCTAAGAGGTAGGGCTAAGGTTTATATTCAGGAAACCCAAAGATGCAGCAACCACCGCAAATGATGCCCATGATGCCTTCATTTCCTCCCACCAATATCACCACCGAGCAGATTCAAAAGGTACCCTCTTTCTCTTTCGTCTTTACTTCTTACTCAAACGCCTATTTTTTTTTGCATATGGTATTGAAGTGACTGCTCTCTTCGGTGGTGTGTTTGATTTTATAGAACTTTGTTTATGGCCTTGGATATGAATTTGAAAGAAACATGCCCATTTGTTCTTGATAAATTAATAGCTTCAACATGAATGGCTCCTAGAATGACTAAATGTTTGCTGATGGAAAGAACCAAATAAAGAAGGCCCCTGGGAATTAATGTGATTCATAGAAAAGAAATGATGAATTGATGTATTTAATTAAGAATTGAAAATGACAAGGTAGTATTCTGTTGGAAACATGGTTCGAGGACTAATGTGCTGGACTGCTAGTTGCAAATTTGATATTGGAGCTGGGAGATGCCGTGGTTGATTAAAATTTTGGAGATTTTTCCTTTTGTTTTAATTGTGGATTGGAGAGCTTTTCTTCATATTTGCTTCCTCTGTCGCGTAAGGTTTGAACTTTGTTTTATGTTCTTTTTATCTCTGGATATTTGAAGTCTAGAAGTTTATCGAAATAAACTAATATGAATTTAGATTTAGTAAATGCTTCATAATGGATCCTTGTTTAGACATTTGAGTTAAAGTTATCAACAATGAATAGTTTCTACTGCATGCAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAAAATCTGGGGAAACTAGCTGAATGTGCTCAGTAAGTTACCCCTCTCTCTACACATTGTTGTGTATGGGGTTGATTCTTGAAACGTAACATCCCAACCCCATGGAGTCCACAAAGTTGTTGCATTGATTTTTATCTAATTGCCTGTGGTCCTCATAATGTATAGTCCTAACTCCCAATAATGTAGGTTTTTTACGATGTGGATAAGTCTAGAGAGAAGGTTGGGAGTTGGCGAGGTTTAATGCTTCCGTTTGAGAGTTTTTCACTAAACCGTTTTGTAATTATAACATCAATCTTGTTCTTTTGGACTAGAATCCTTTATGTAGTGCAGTGAGTGTTGGATGTCCACTTTTTCAATGAAAGATCAGTTTCTTAACACCCCCCCCAAAAAAAAAAAAAAAAAAAGAAACTATTGATTTACCATGCATGTTATTTGAAAGTGAGGATGGTGTATCTTGGAGTTTAAGAGCTGGAGGCGTCTATGGGTGCAGGTTGAATCTCGCTACCAATGCTTGTTTTATTATTAGAGACCTGGATTTATTATGCATTTCTGTTCTTAAATAAAATCAAGTAGGTATTTCAGAATTGATACAATGTAGTATGTTTGTGAATATTTGGAGTCAAGGGTTACATCATCTACATCCTTTTTTGTGTATATGTGCTCATGTGATTTTATGGACCCATGAAGTGTTACATTTCCTAAAACTATTTTTCATATGTGGCTTTCACTTTTCCCAATAGGATGTATTTTACTCAAGGTCAATTTCATCCCTATGTACTTTTAGTGTGCATAAGATTGTACTTGAGTTAATGCGGTTCTTTAAATAGGTACCAAGCTCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCGCAGCCACAGGCACCAGCTATGCCTCCACAGGTTGGTTAATAACTAGGCCGCAGTTTCTTTTAATTTCATGACGTATTATAGTCTGTCTTACCTATGTTAGAATGGTCAGATGGCCCCACATCCTGCCATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAGGCAGCTATTATGGCTCAGCAATCGGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTCGGCAACCCCCATCAATTACAAGATCCACAGCAGCAACTACACCAACAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGTGGGGCTAACAATGGCATGCATCACCCACATCATACTGAGAGTACCCTTGTGGGTGCTACTGCTGGAGGCCCTCCTCGAGGTTCAGGGCAAACTGATGGTCGTGGAGGTGGCAAACAGGACTCTGCTGATGTGGGAGGTGCAGGTGCTGATGGTCAGGGGAGCTCAGCTGGTGGTCGGGGCGGTGGTGGTGATGGTGAGGAAGCTAAGTAACATAGCCTTATGGCTGGTTCCACATCCATGTGTGGCTTGTTAATAGTAGGTGCTTGGTACGGTAGAGCTTCCATGCTGTGGTGATATTAGTAGATTGAGTAAAGAAACCAAAGTTCTCTCAATTGTTTTAGTTTAAGCAGAATATCTAGGTAAGTTGTGTATGTGTTGTAAGAGTCTTGGTATGCAGTTAAATTCCATGCTTGACAATATTAGGCAGACGGAGTTTGAAGAGAGTTAGTAGTAGACTGGTCTCGATCGATCAGTACTTTCACTTTTATCTCATTTTGTAAACAACTTGCGAAAGATCAGTAGGATTAGTTATAATATAATTCTACTGAATGGTTTCTAGCAGTCGGTTCTATAACTGACCTCAAACTTTTGAATGCAAAGGAAAATTACCAACAATGTTGCATTTGCACAAGGTGTATGGTCTGTTTGAAATTTCTGTGTCAGAACTTTGTTTGGACTAGTTGCTTATGGCCAGGTCTTCAGGCAAACCAAAGCTAAATGACTGAGGTTAAATCCACAAGTTGAAATAGTAATCTTTTATAGCCTTAGGTTCTAATATGAGATTAGTCGAGGTGCGCG

mRNA sequence

TTTTCCATCAAATTTCAGTGTGAACGTAAAAATGAAACCTAACCAATATTTTTTTTCTCCTGAAATTAAAAAAAAAAAAAAAAACGAAACCTTCATGAAATTTTCTATTTTCTATGTCCTCTTTGGCTCTTTCTTGCATTTCCTTCTTCTCCGTACGCAGCACTGATTAAATTATTTTTCTTTTAAATTGTTTTTTAACATCACAACTTTCCTTTTTTTCTAAACCCTATTTCACGTTCAGCCACCCCCTTCCTCCCATTATCAGCCCCGCCGCTCGCCGCCCGTCGCACCCCACACGCCGTCTCAGCAGCTGCCGCTGTCTCAGCCTTCCCACGAAATCGCAGCCGCTCCCTCCCTCTCACACTCTCTCGACTCCGAGCAATCAGAGTTACTTATCACCGTTTATTATTTGTCACATACACATTGGTTCACCGCGCTAGTGAGATCGCGCCGCCGCTACTTCTTTTTCAGATCCCAAGAGGTAGGGCTAAGGTTTATATTCAGGAAACCCAAAGATGCAGCAACCACCGCAAATGATGCCCATGATGCCTTCATTTCCTCCCACCAATATCACCACCGAGCAGATTCAAAAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAAAATCTGGGGAAACTAGCTGAATGTGCTCAGTACCAAGCTCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCGCAGCCACAGGCACCAGCTATGCCTCCACAGATGGCCCCACATCCTGCCATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAGGCAGCTATTATGGCTCAGCAATCGGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTCGGCAACCCCCATCAATTACAAGATCCACAGCAGCAACTACACCAACAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGTGGGGCTAACAATGGCATGCATCACCCACATCATACTGAGAGTACCCTTGTGGGTGCTACTGCTGGAGGCCCTCCTCGAGGTTCAGGGCAAACTGATGGTCGTGGAGGTGGCAAACAGGACTCTGCTGATGTGGGAGGTGCAGGTGCTGATGGTCAGGGGAGCTCAGCTGGTGGTCGGGGCGGTGGTGGTGATGGTGAGGAAGCTAAGTAACATAGCCTTATGGCTGGTTCCACATCCATGTGTGGCTTGTTAATAGTAGGTGCTTGGTACGGTAGAGCTTCCATGCTGTGGTGATATTAGTAGATTGAGTAAAGAAACCAAAGTTCTCTCAATTGTTTTAGTTTAAGCAGAATATCTAGGTAAGTTGTGTATGTGTTGTAAGAGTCTTGGTATGCAGTTAAATTCCATGCTTGACAATATTAGGCAGACGGAGTTTGAAGAGAGTTAGTAGTAGACTGGTCTCGATCGATCAGTACTTTCACTTTTATCTCATTTTGTAAACAACTTGCGAAAGATCAGTAGGATTAGTTATAATATAATTCTACTGAATGGTTTCTAGCAGTCGGTTCTATAACTGACCTCAAACTTTTGAATGCAAAGGAAAATTACCAACAATGTTGCATTTGCACAAGGTGTATGGTCTGTTTGAAATTTCTGTGTCAGAACTTTGTTTGGACTAGTTGCTTATGGCCAGGTCTTCAGGCAAACCAAAGCTAAATGACTGAGGTTAAATCCACAAGTTGAAATAGTAATCTTTTATAGCCTTAGGTTCTAATATGAGATTAGTCGAGGTGCGCG

Coding sequence (CDS)

ATGCAGCAACCACCGCAAATGATGCCCATGATGCCTTCATTTCCTCCCACCAATATCACCACCGAGCAGATTCAAAAGTATCTTGATGAGAACAAAAAGTTGATATTGGCCATACTGGACAACCAAAATCTGGGGAAACTAGCTGAATGTGCTCAGTACCAAGCTCAACTTCAGAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCGCAGCCACAGGCACCAGCTATGCCTCCACAGATGGCCCCACATCCTGCCATGCAGCAAGGGGGTTATTATATGCAGCACCCTCAGGCAGCTATTATGGCTCAGCAATCGGGACTTTTCCCTCCAAAAGTTCCATTGCAGTTCGGCAACCCCCATCAATTACAAGATCCACAGCAGCAACTACACCAACAACACCAGCAAGCAATGCAAGGGCAAATGGGACTAAGACCTATTGGTGGGGCTAACAATGGCATGCATCACCCACATCATACTGAGAGTACCCTTGTGGGTGCTACTGCTGGAGGCCCTCCTCGAGGTTCAGGGCAAACTGATGGTCGTGGAGGTGGCAAACAGGACTCTGCTGATGTGGGAGGTGCAGGTGCTGATGGTCAGGGGAGCTCAGCTGGTGGTCGGGGCGGTGGTGGTGATGGTGAGGAAGCTAAGTAA

Protein sequence

MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGGPPRGSGQTDGRGGGKQDSADVGGAGADGQGSSAGGRGGGGDGEEAK

Homology

[Close]

BLAST of Bhi04G001933 vs. TAIR 10
Match: AT4G00850.1 (GRF1-interacting factor 3 )

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-54
Identity = 144/232 (62.07%), Postives = 161/232 (69.40%), Query Frame = 0


Query: 1   MQQPPQMMPM-MPSFPPT-NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQ 60
           MQQ PQM+PM +PSFPPT NITTEQIQKYLDENKKLI+AIL+NQNLGKLAECAQYQA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 61  KNLMYLAAIADAQPQAP-------AMPPQ-MAPHPAMQQ--GGYYMQHPQAAIMAQQ--S 120
           KNLMYLAAIADAQPQ P       AM PQ MAP+P+  Q    Y+MQ  QA  MAQQ   
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 121 GLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIG-GANNGMHHPHHTESTLV 180
           G+FPP+ PLQFG+PHQ  DPQQQL   HQQAMQG MG+RP+G   NNG+ H  H   T +
Sbjct: 121 GIFPPRGPLQFGSPHQFLDPQQQL---HQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 180

Query: 181 GATAGGPPRGSGQTDGRGGGKQDSADVGGAGADGQGSSAGGRGGGGDGEEAK 218
            A   GP       D  GGGK D  ++  +GADGQG SA   GGG    E K
Sbjct: 181 AANNAGP------NDASGGGKPDGTNMSQSGADGQGGSAARHGGGDAKTEGK 223

[Close]

BLAST of Bhi04G001933 vs. TAIR 10
Match: AT1G01160.1 (GRF1-interacting factor 2 )

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-48
Identity = 128/214 (59.81%), Postives = 141/214 (65.89%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 61
           QQ PQM PM+PS PP  NITTEQIQKYLDENKKLI+AI++NQNLGKLAECAQYQA LQKN
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKN 63

Query: 62  LMYLAAIADAQPQAP--------AMPPQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPP 121
           LMYLAAIADAQP  P        A+  QMA PH  MQ   Y+MQHPQA+     +G+F P
Sbjct: 64  LMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQAS----PAGIFAP 123

Query: 122 KVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGG 181
           + PLQFG+P Q QDPQQQ  Q HQQAMQG MG+RP+G  NNGM H               
Sbjct: 124 RGPLQFGSPLQFQDPQQQ-QQIHQQAMQGHMGIRPMGMTNNGMQHAMQQ----------- 183

Query: 182 PPRGSGQTDGRGGGKQDSADVGGAGADGQGSSAG 206
           P  G G   G  GGKQD       GADGQG   G
Sbjct: 184 PETGLGGNVGLRGGKQD-------GADGQGKDDG 194

[Close]

BLAST of Bhi04G001933 vs. TAIR 10
Match: AT1G01160.2 (GRF1-interacting factor 2 )

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-43
Identity = 128/248 (51.61%), Postives = 141/248 (56.85%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITTEQIQK---------------------------------- 61
           QQ PQM PM+PS PP  NITTEQIQK                                  
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKMLGGSGNFESGFQEWTLKLDACLMLLFCTFSWLD 63

Query: 62  YLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAP--------AMP 121
           YLDENKKLI+AI++NQNLGKLAECAQYQA LQKNLMYLAAIADAQP  P        A+ 
Sbjct: 64  YLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTPGPSPSTAVA 123

Query: 122 PQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQQA 181
            QMA PH  MQ   Y+MQHPQA+     +G+F P+ PLQFG+P Q QDPQQQ  Q HQQA
Sbjct: 124 AQMATPHSGMQPPSYFMQHPQAS----PAGIFAPRGPLQFGSPLQFQDPQQQ-QQIHQQA 183

Query: 182 MQGQMGLRPIGGANNGMHHPHHTESTLVGATAGGPPRGSGQTDGRGGGKQDSADVGGAGA 206
           MQG MG+RP+G  NNGM H               P  G G   G  GGKQD       GA
Sbjct: 184 MQGHMGIRPMGMTNNGMQHAMQQ-----------PETGLGGNVGLRGGKQD-------GA 228

[Close]

BLAST of Bhi04G001933 vs. TAIR 10
Match: AT5G28640.1 (SSXT family protein )

HSP 1 Score: 98.6 bits (244), Expect = 6.6e-21
Identity = 82/211 (38.86%), Postives = 114/211 (54.03%), Query Frame = 0


Query: 6   QMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLA 65
           QM PMM  + P+N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ QA+LQ+NLMYLA
Sbjct: 7   QMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLA 66

Query: 66  AIADAQPQAPAMPPQMAPHPA----MQQGGYYMQHPQAAIMAQ--QSGLFPPKVPLQFGN 125
           AIAD+QPQ P++  Q           + G +Y+Q  QA    Q  Q  L   +  + +  
Sbjct: 67  AIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQ 126

Query: 126 PHQLQDPQQQLHQQHQQAMQGQMGLRPI--GGANNGMHHPHHTESTLVGATAGGPPRGSG 185
             Q Q P   L  QHQQ    Q+G+     GG ++G+H        L G   G    G G
Sbjct: 127 QQQQQQPYATL--QHQQLHHSQLGMSSSSGGGGSSGLH-------ILQGEAGGFHDFGRG 186

Query: 186 QTDGRGGGKQDSADVGGAGADGQGSSAGGRG 209
           + +   GG          G +G+G S+G  G
Sbjct: 187 KPEMGSGG----------GGEGRGGSSGDGG 198

[Close]

BLAST of Bhi04G001933 vs. ExPASy Swiss-Prot
Match: Q93VH6 (GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.7e-53
Identity = 144/232 (62.07%), Postives = 161/232 (69.40%), Query Frame = 0


Query: 1   MQQPPQMMPM-MPSFPPT-NITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQ 60
           MQQ PQM+PM +PSFPPT NITTEQIQKYLDENKKLI+AIL+NQNLGKLAECAQYQA LQ
Sbjct: 1   MQQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQ 60

Query: 61  KNLMYLAAIADAQPQAP-------AMPPQ-MAPHPAMQQ--GGYYMQHPQAAIMAQQ--S 120
           KNLMYLAAIADAQPQ P       AM PQ MAP+P+  Q    Y+MQ  QA  MAQQ   
Sbjct: 61  KNLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQPPPSYFMQQHQAVGMAQQIPP 120

Query: 121 GLFPPKVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIG-GANNGMHHPHHTESTLV 180
           G+FPP+ PLQFG+PHQ  DPQQQL   HQQAMQG MG+RP+G   NNG+ H  H   T +
Sbjct: 121 GIFPPRGPLQFGSPHQFLDPQQQL---HQQAMQGHMGIRPMGLNNNNGLQHQMHHHETAL 180

Query: 181 GATAGGPPRGSGQTDGRGGGKQDSADVGGAGADGQGSSAGGRGGGGDGEEAK 218
            A   GP       D  GGGK D  ++  +GADGQG SA   GGG    E K
Sbjct: 181 AANNAGP------NDASGGGKPDGTNMSQSGADGQGGSAARHGGGDAKTEGK 223

[Close]

BLAST of Bhi04G001933 vs. ExPASy Swiss-Prot
Match: Q9MAL9 (GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.8e-47
Identity = 128/214 (59.81%), Postives = 141/214 (65.89%), Query Frame = 0


Query: 2   QQPPQMMPMMPSFPP-TNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 61
           QQ PQM PM+PS PP  NITTEQIQKYLDENKKLI+AI++NQNLGKLAECAQYQA LQKN
Sbjct: 4   QQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQKN 63

Query: 62  LMYLAAIADAQPQAP--------AMPPQMA-PHPAMQQGGYYMQHPQAAIMAQQSGLFPP 121
           LMYLAAIADAQP  P        A+  QMA PH  MQ   Y+MQHPQA+     +G+F P
Sbjct: 64  LMYLAAIADAQPPPPTPGPSPSTAVAAQMATPHSGMQPPSYFMQHPQAS----PAGIFAP 123

Query: 122 KVPLQFGNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGG 181
           + PLQFG+P Q QDPQQQ  Q HQQAMQG MG+RP+G  NNGM H               
Sbjct: 124 RGPLQFGSPLQFQDPQQQ-QQIHQQAMQGHMGIRPMGMTNNGMQHAMQQ----------- 183

Query: 182 PPRGSGQTDGRGGGKQDSADVGGAGADGQGSSAG 206
           P  G G   G  GGKQD       GADGQG   G
Sbjct: 184 PETGLGGNVGLRGGKQD-------GADGQGKDDG 194

[Close]

BLAST of Bhi04G001933 vs. ExPASy Swiss-Prot
Match: Q8L8A5 (GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.2e-20
Identity = 82/211 (38.86%), Postives = 114/211 (54.03%), Query Frame = 0


Query: 6   QMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLA 65
           QM PMM  + P+N+T++ IQ+YLDENK LIL I+++QN GKL+ECA+ QA+LQ+NLMYLA
Sbjct: 7   QMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLA 66

Query: 66  AIADAQPQAPAMPPQMAPHPA----MQQGGYYMQHPQAAIMAQ--QSGLFPPKVPLQFGN 125
           AIAD+QPQ P++  Q           + G +Y+Q  QA    Q  Q  L   +  + +  
Sbjct: 67  AIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQQQQMTQQSLMAARSSMLYAQ 126

Query: 126 PHQLQDPQQQLHQQHQQAMQGQMGLRPI--GGANNGMHHPHHTESTLVGATAGGPPRGSG 185
             Q Q P   L  QHQQ    Q+G+     GG ++G+H        L G   G    G G
Sbjct: 127 QQQQQQPYATL--QHQQLHHSQLGMSSSSGGGGSSGLH-------ILQGEAGGFHDFGRG 186

Query: 186 QTDGRGGGKQDSADVGGAGADGQGSSAGGRG 209
           + +   GG          G +G+G S+G  G
Sbjct: 187 KPEMGSGG----------GGEGRGGSSGDGG 198

[Close]

BLAST of Bhi04G001933 vs. ExPASy Swiss-Prot
Match: Q6AVI1 (GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.6e-19
Identity = 85/204 (41.67%), Postives = 110/204 (53.92%), Query Frame = 0


Query: 16  PTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQAP 75
           PT +TT+ IQ+YLDENK+LILAILDNQN GK+ ECA+ QA+LQ NLMYLAAIAD+QP   
Sbjct: 20  PTTVTTDLIQQYLDENKQLILAILDNQNNGKVEECARNQAKLQHNLMYLAAIADSQPPQT 79

Query: 76  AMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNPHQLQDPQQQLHQQHQ 135
           A   Q   +  MQ G  YM    A +MA QS L   +  + +  P     P QQ  QQ  
Sbjct: 80  AAMSQYPSNLMMQSGARYMPQQSAQMMAPQS-LMAARSSMMYAQP--ALSPLQQQQQQQA 139

Query: 136 QAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGGPPRGSGQTD-------GRGGGKQD 195
            A  GQ+G+   GG  +G    H   S  +G   GG   G+   +       GRGGG   
Sbjct: 140 AAAHGQLGMGS-GGTTSGFSILHGEAS--MGGGGGGGGAGNSMMNAGVFSDFGRGGGGGG 199

Query: 196 SADVGGAGADGQGSSAGGRGGGGD 213
                    D +G+++G + G G+
Sbjct: 200 KEGSTSLSVDVRGANSGAQSGDGE 217

[Close]

BLAST of Bhi04G001933 vs. ExPASy Swiss-Prot
Match: A5HEH4 (GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-13
Identity = 92/230 (40.00%), Postives = 112/230 (48.70%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQ    MM    S  P  +TT+ IQ+YLDENK+LILAILDNQN GK  EC ++QA+LQ N
Sbjct: 7   MQMNQNMMGGYTS--PAAVTTDLIQQYLDENKQLILAILDNQNNGKAEECERHQAKLQHN 66

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIAD+QP   A   Q   +  MQ G  YM  PQ+  M     L   +  + + +P
Sbjct: 67  LMYLAAIADSQPPQTAPLSQYPSNLMMQPGPRYMP-PQSGQMMNPQSLMAARSSMMYAHP 126

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGGPPRGSGQTD 180
                P QQ     QQA  GQ+G+ P GG   G        S L G  + G   G G   
Sbjct: 127 S--LSPLQQ-----QQAAHGQLGMAP-GGGGGGTTSGF---SILHGEASMG---GGGAGA 186

Query: 181 GRGGGKQDSADVGGAGADGQGSSAGG-------RGG------GGDGEEAK 218
           G G    ++    G G  G G+  G        RGG       GDGE  K
Sbjct: 187 GAGNNMMNAGMFSGFGRSGSGAKEGSTSLSVDVRGGTSSGAQSGDGEYLK 219

[Close]

BLAST of Bhi04G001933 vs. ExPASy TrEMBL
Match: A0A0A0K7M8 (SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008810 PE=3 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.2e-107
Identity = 211/217 (97.24%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGGPPRGSGQTD 180
           HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTL GA+AGGPPR SGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGGASAGGPPRSSGQTD 180

Query: 181 GRGGGKQDSADVGGAGADGQGSSAGGRGGGGDGEEAK 218
           GRG GKQDSADVGGAG DGQGS+AGGRGGGGDGEEAK
Sbjct: 181 GRGSGKQDSADVGGAGTDGQGSAAGGRGGGGDGEEAK 217

[Close]

BLAST of Bhi04G001933 vs. ExPASy TrEMBL
Match: A0A1S4DTX1 (GRF1-interacting factor 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=3 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 209/217 (96.31%), Postives = 212/217 (97.70%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGGPPRGSGQTD 180
           HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTL  A+AGGPPR SGQTD
Sbjct: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSGQTD 180

Query: 181 GRGGGKQDSADVGGAGADGQGSSAGGRGGGGDGEEAK 218
           GRG GKQDSADVGGAG DGQG++AGGRGGGGDGEEAK
Sbjct: 181 GRGSGKQDSADVGGAGTDGQGNAAGGRGGGGDGEEAK 217

[Close]

BLAST of Bhi04G001933 vs. ExPASy TrEMBL
Match: A0A6J1JX83 (GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489667 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 4.3e-105
Identity = 207/217 (95.39%), Postives = 211/217 (97.24%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGGPPRGSGQTD 180
           HQLQD QQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE+TL GA+AGGP R SGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEATLGGASAGGPARSSGQTD 180

Query: 181 GRGGGKQDSADVGGAGADGQGSSAGGRGGGGDGEEAK 218
           GRGGGKQDSADVGG GAD QG+SAGGRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGTGADAQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of Bhi04G001933 vs. ExPASy TrEMBL
Match: A0A6J1FN71 (GRF1-interacting factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445449 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.7e-105
Identity = 207/217 (95.39%), Postives = 210/217 (96.77%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQFGNP 120
           LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAA+MAQQSGLFPPKVPLQFGNP
Sbjct: 61  LMYLAAIADAQPQAPAMPPQMAPHPAMQQGGYYMQHPQAAMMAQQSGLFPPKVPLQFGNP 120

Query: 121 HQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGGPPRGSGQTD 180
           HQLQD QQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTE TL GA+AGGP R SGQTD
Sbjct: 121 HQLQDQQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTEGTLGGASAGGPARSSGQTD 180

Query: 181 GRGGGKQDSADVGGAGADGQGSSAGGRGGGGDGEEAK 218
           GRGGGKQDSADVGG GAD QG+SAGGRGGGGDGEEAK
Sbjct: 181 GRGGGKQDSADVGGTGADAQGNSAGGRGGGGDGEEAK 217

[Close]

BLAST of Bhi04G001933 vs. ExPASy TrEMBL
Match: A0A1S4DTY1 (GRF1-interacting factor 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=3 SV=1)

HSP 1 Score: 390.2 bits (1001), Expect = 5.7e-105
Identity = 209/220 (95.00%), Postives = 212/220 (96.36%), Query Frame = 0


Query: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60
           MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN
Sbjct: 1   MQQPPQMMPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKN 60

Query: 61  LMYLAAIADAQPQAPAMPP---QMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF 120
           LMYLAAIADAQPQAPAMPP   QMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF
Sbjct: 61  LMYLAAIADAQPQAPAMPPQNGQMAPHPAMQQGGYYMQHPQAAIMAQQSGLFPPKVPLQF 120

Query: 121 GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLVGATAGGPPRGSG 180
           GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTL  A+AGGPPR SG
Sbjct: 121 GNPHQLQDPQQQLHQQHQQAMQGQMGLRPIGGANNGMHHPHHTESTLGSASAGGPPRSSG 180

Query: 181 QTDGRGGGKQDSADVGGAGADGQGSSAGGRGGGGDGEEAK 218
           QTDGRG GKQDSADVGGAG DGQG++AGGRGGGGDGEEAK
Sbjct: 181 QTDGRGSGKQDSADVGGAGTDGQGNAAGGRGGGGDGEEAK 220

The following BLAST results are available for this feature:

BLAST of Bhi04G001933 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00850.1	1.2e-54	62.07	GRF1-interacting factor 3	[more]
AT1G01160.1	1.3e-48	59.81	GRF1-interacting factor 2	[more]
AT1G01160.2	2.1e-43	51.61	GRF1-interacting factor 2	[more]
AT5G28640.1	6.6e-21	38.86	SSXT family protein	[more]

BLAST of Bhi04G001933 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VH6	1.7e-53	62.07	GRF1-interacting factor 3 OS=Arabidopsis thaliana OX=3702 GN=GIF3 PE=1 SV=1	[more]
Q9MAL9	1.8e-47	59.81	GRF1-interacting factor 2 OS=Arabidopsis thaliana OX=3702 GN=GIF2 PE=1 SV=1	[more]
Q8L8A5	9.2e-20	38.86	GRF1-interacting factor 1 OS=Arabidopsis thaliana OX=3702 GN=GIF1 PE=1 SV=1	[more]
Q6AVI1	4.6e-19	41.67	GRF-interacting factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GIF1 PE=1 S...	[more]
A5HEH4	1.7e-13	40.00	GRF-interacting factor 1 OS=Zea mays OX=4577 GN=GIF1 PE=1 SV=1	[more]

BLAST of Bhi04G001933 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7M8	1.2e-107	97.24	SSXT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008810 PE=3 S...	[more]
A0A1S4DTX1	1.3e-106	96.31	GRF1-interacting factor 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=...	[more]
A0A6J1JX83	4.3e-105	95.39	GRF1-interacting factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111489667 PE=3 ...	[more]
A0A6J1FN71	5.7e-105	95.39	GRF1-interacting factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111445449 PE=...	[more]
A0A1S4DTY1	5.7e-105	95.00	GRF1-interacting factor 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485532 PE=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007726	SS18, N-terminal	PFAM	PF05030	SSXT	coord: 18..73 e-value: 3.3E-22 score: 77.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 120..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..217
None	No IPR available	PANTHER	PTHR23107:SF26	BNAA09G51550D PROTEIN	coord: 1..188
IPR044779	SS18 family	PANTHER	PTHR23107	SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN	coord: 1..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001933	Bhi04M001933	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008283	cell population proliferation
biological_process	GO:0048366	leaf development
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003713	transcription coactivator activity