Bhi04G001839 (gene) Wax gourd (B227) v1

Overview


Name	Bhi04G001839
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Reticulon-like protein
Location	chr4: 61678239 .. 61680808 (-)
RNA-Seq Expression	Bhi04G001839
Synteny	Bhi04G001839

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAACTATAGCAATAAAATAACCATAAAACAACTGTAACGTTTCCATTAAAATAATAGTAGAAAACCCAAAAACCCCCCATCTAAAGAAGATGAAGAAGAAGAAAGTAAAATAAAATAAATAAAAAAGCGACTTTTTCAGCCTCTCAGGGCAGAACAAGAACGAGGGAAGGCTTTGAATTTGGAAATTAAAAAATTCTTCAATTGCGTGAAATCCGTTTCCAGCTTTATCTTCTGAATCCTCGATCATACAGAAACCCCAAGAATTTTCTAGCTTCAATTTTGACTCTAAACCTTCCTCTCCAGAATTCACTCTGACCGGAGCAATTCGGAACTGCAATGGTCGATATTTCCGATACCACCGCCGGCAACGTTGAAGGCGACGGGAAAGACGCACCCTGCACCTCATGTGACCGGCAAACTTTACTCCACCAGTCCATGGGCGGCGGTAAAGGTATTCAATTCTCCCTTCTCATAATTTCGTTGTCCCTCGATCAATTTCACGTTTCTGAATTAGATTCCTTCGTCTCCTTTTCGAGAATTGATGTTGAATCTGTTGATGCAACCGATGATTCTTGAGGGTTTTGATTGTTTATGGAACACAGGACAATATGAAGCTTGAATTTAAGTGTTTTCTGAAATGGGTTTGCCAGATTCGTTGATATTCTAATCATTTATCTGTTTCCCTCTTTTGCACTTGAATTACGGCTTTGACCCGTTGAAACTTGAAGTTTTTGTTACCTTTTTTTTTGGGAATCGGATTCTACATTTGATATTTTCCAGTTTATTACGAATTTCTTGAGTGGTTTTCATGTTTTTTCTTTGTGTCTTAGAAGGAAAAGTTTTTAAAACTGATGATGATATTCCCTCTCTGGTTTGATAATCAAGAATTTTGACTGTTTCTTCTTTTGCATAGCGGCTGATATTCTTCTGTGGAAACAGCGGCATGTTTCGTTCGGCATTGTTGTTGTTGCTACAGTATTTTGGCTTCTAATTGAGTACTCTGGATTGCCATTGTTGACAACATGTTCGGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGAGCAAACTATGCTGCATTCCGAAACAAGTATGGCTACAGCTGACTTATGTTTTGATTCATAATGAAGTTCTTGCATATCATAAACTTTGCAAAATACTTTTTGCTTATACTGTTTTGTTCTTTCCAGCAGATTATGTGTTTTCCCTGTTAGCTTTTCTTCATTTTTCTCTCTGTATGCAGGCAACTTCAAACATTACCGCAACTCGCTCTGTCGGAGGAGTTTGTCAATAACGTTGCAGCATCGCTTCGGGCAAAAATCAATAACACTTTACTTATGGCTCATGAAATCACACTTGGCAATGATTTCAAACTCTTTTTCAGGGTTAGTATTTGAAGCACCACTAAAGGCTTGCTTGAATGATCATATATGTGATTTACACTGACTCCCAAATCCTATTATCCTATATTATTGGATACTTGAATTAAATGGGCAAAACTGAAAAGTATTAATAGGCTTTTAAGTACTTTTCCTCTGTAAATAATAGATCAACCATTTGGATGTGGCAGTGAATGTTTACAGGACAGTTTCAAGAATGCATAAACTTAATATTCACTTCAAGAGCATAATGTTGGCTTGCTACTTCTTTGTTTTTGGCTGCTATAATATGAGTAACCTTGTAAGCACCTTTTGCAGATGGTGATCGGTTTGTGGCTTTTATCCGTCATGGGTAGCTACGTTTCTTTCTTCACCTTTGCATATATTGGTATGTACAAACATCCTAAAACACTTACAGTGACATATCTTTAGTTTGTATACGTTTCATCTGTTGGTGAATTACAGCAATCAACCACTTAGCTTTATTTTGATCCTCATCGATTATTAAACATTCATGGAATTTTGTTTGTTTCGTCCATTCACCATTTTCTTTTGTGTTTCCTCCTTACAAGAAATGAATACTATCTAAAATTTCCTTTTCCAAGTACTTCGCATTGCCATGACCATCATTTTCGTGCTTTTCACTCAGTTTACTGATCTAGCAAAAAAAAAAATGTTATTGCCCCCCTTTGTAACCGAGTCTTCTTAACCTGTGATGTCGATTTTTGTCATTTAACTCGATGACAGGAACAATCATCTCGATAACCATCCCCGCCTTGTACAGCAAATACGATGAACATGTTGACAGATACTGCGGAATGATCCGCCAACAATTTAGAAAGCATTATAGAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTAGTCTATCCAAGGATAAAGATCAGTGAAAAATCCTGTCTTTAATTTTTCTATAGTTGTACTACACCACAGGAAAATTGTAATACAGTTTCATCACAAATGAATGCCCTGTTAACTGGATTCTTGAAGGTTATTGCTTGGCCATGTATTGCATACCCAGGTTTAATGATTTCAAGTCAACCATTCTGGATCAGCTATCACATATTTTTGTTTTTAATTGCTAGAAGAAAATGTCATTCTTTTAATTGTTATTTAACTTTATATTTATGAATATTTTGGTTTGAAACTTGTAAATGGG

mRNA sequence

AAAAAAACTATAGCAATAAAATAACCATAAAACAACTGTAACGTTTCCATTAAAATAATAGTAGAAAACCCAAAAACCCCCCATCTAAAGAAGATGAAGAAGAAGAAAGTAAAATAAAATAAATAAAAAAGCGACTTTTTCAGCCTCTCAGGGCAGAACAAGAACGAGGGAAGGCTTTGAATTTGGAAATTAAAAAATTCTTCAATTGCGTGAAATCCGTTTCCAGCTTTATCTTCTGAATCCTCGATCATACAGAAACCCCAAGAATTTTCTAGCTTCAATTTTGACTCTAAACCTTCCTCTCCAGAATTCACTCTGACCGGAGCAATTCGGAACTGCAATGGTCGATATTTCCGATACCACCGCCGGCAACGTTGAAGGCGACGGGAAAGACGCACCCTGCACCTCATGTGACCGGCAAACTTTACTCCACCAGTCCATGGGCGGCGGTAAAGCGGCTGATATTCTTCTGTGGAAACAGCGGCATGTTTCGTTCGGCATTGTTGTTGTTGCTACAGTATTTTGGCTTCTAATTGAGTACTCTGGATTGCCATTGTTGACAACATGTTCGGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGAGCAAACTATGCTGCATTCCGAAACAAGCAACTTCAAACATTACCGCAACTCGCTCTGTCGGAGGAGTTTGTCAATAACGTTGCAGCATCGCTTCGGGCAAAAATCAATAACACTTTACTTATGGCTCATGAAATCACACTTGGCAATGATTTCAAACTCTTTTTCAGGATGGTGATCGGTTTGTGGCTTTTATCCGTCATGGGTAGCTACGTTTCTTTCTTCACCTTTGCATATATTGGAACAATCATCTCGATAACCATCCCCGCCTTGTACAGCAAATACGATGAACATGTTGACAGATACTGCGGAATGATCCGCCAACAATTTAGAAAGCATTATAGAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTAGTCTATCCAAGGATAAAGATCAGTGAAAAATCCTGTCTTTAATTTTTCTATAGTTGTACTACACCACAGGAAAATTGTAATACAGTTTCATCACAAATGAATGCCCTGTTAACTGGATTCTTGAAGGTTATTGCTTGGCCATGTATTGCATACCCAGGTTTAATGATTTCAAGTCAACCATTCTGGATCAGCTATCACATATTTTTGTTTTTAATTGCTAGAAGAAAATGTCATTCTTTTAATTGTTATTTAACTTTATATTTATGAATATTTTGGTTTGAAACTTGTAAATGGG

Coding sequence (CDS)

ATGGTCGATATTTCCGATACCACCGCCGGCAACGTTGAAGGCGACGGGAAAGACGCACCCTGCACCTCATGTGACCGGCAAACTTTACTCCACCAGTCCATGGGCGGCGGTAAAGCGGCTGATATTCTTCTGTGGAAACAGCGGCATGTTTCGTTCGGCATTGTTGTTGTTGCTACAGTATTTTGGCTTCTAATTGAGTACTCTGGATTGCCATTGTTGACAACATGTTCGGATGTCTTGCTGATTTTGGTTGTCCTATTGTTTCTTCGAGCAAACTATGCTGCATTCCGAAACAAGCAACTTCAAACATTACCGCAACTCGCTCTGTCGGAGGAGTTTGTCAATAACGTTGCAGCATCGCTTCGGGCAAAAATCAATAACACTTTACTTATGGCTCATGAAATCACACTTGGCAATGATTTCAAACTCTTTTTCAGGATGGTGATCGGTTTGTGGCTTTTATCCGTCATGGGTAGCTACGTTTCTTTCTTCACCTTTGCATATATTGGAACAATCATCTCGATAACCATCCCCGCCTTGTACAGCAAATACGATGAACATGTTGACAGATACTGCGGAATGATCCGCCAACAATTTAGAAAGCATTATAGAGTGATGGATGAGAGTGTTTTCAGCAGACTCCCTGGTAGTCTATCCAAGGATAAAGATCAGTGA

Protein sequence

MVDISDTTAGNVEGDGKDAPCTSCDRQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATVFWLLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAASLRAKINNTLLMAHEITLGNDFKLFFRMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPALYSKYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKDQ

Homology

[Close]

BLAST of Bhi04G001839 vs. TAIR 10
Match: AT3G10915.2 (Reticulon family protein )

HSP 1 Score: 248.4 bits (633), Expect = 5.3e-66
Identity = 123/221 (55.66%), Postives = 167/221 (75.57%), Query Frame = 0


Query: 3   DISDTTAGNVEGDGKDAPCTSCDRQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATVFW 62
           DI     G  EG G  +      RQ  +HQ MGGGKAAD+LLW++RH+S G+++++TV W
Sbjct: 6   DIDGDFDGRNEG-GSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAW 65

Query: 63  LLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAASLR 122
           L+ E+SGLP L+  SDVLLI++++ F+ A  +AFRN+QL +LP+L LSEE VN+ AAS R
Sbjct: 66  LIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFR 125

Query: 123 AKINNTLLMAHEITLGNDFKLFFRMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPALYS 182
            K+N+ L+MAH++T+GNDF+LFF++VI LWLLS +GSY+S  T  YIGTI+S+TIPALYS
Sbjct: 126 IKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYS 185

Query: 183 KYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKD 224
           KY   VD+ CG I ++   HY+++DE+V SRL  SLSKDKD
Sbjct: 186 KYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 225

[Close]

BLAST of Bhi04G001839 vs. TAIR 10
Match: AT3G10915.4 (Reticulon family protein )

HSP 1 Score: 243.8 bits (621), Expect = 1.3e-64
Identity = 123/222 (55.41%), Postives = 167/222 (75.23%), Query Frame = 0


Query: 3   DISDTTAGNVEGDGKDAPCTSCDRQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATVFW 62
           DI     G  EG G  +      RQ  +HQ MGGGKAAD+LLW++RH+S G+++++TV W
Sbjct: 6   DIDGDFDGRNEG-GSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAW 65

Query: 63  LLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAASLR 122
           L+ E+SGLP L+  SDVLLI++++ F+ A  +AFRN+QL +LP+L LSEE VN+ AAS R
Sbjct: 66  LIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFR 125

Query: 123 AKINNTLLMAHEITLGNDFKLFFR-MVIGLWLLSVMGSYVSFFTFAYIGTIISITIPALY 182
            K+N+ L+MAH++T+GNDF+LFF+ +VI LWLLS +GSY+S  T  YIGTI+S+TIPALY
Sbjct: 126 IKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALY 185

Query: 183 SKYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKD 224
           SKY   VD+ CG I ++   HY+++DE+V SRL  SLSKDKD
Sbjct: 186 SKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 226

[Close]

BLAST of Bhi04G001839 vs. TAIR 10
Match: AT3G10915.5 (Reticulon family protein )

HSP 1 Score: 231.1 bits (588), Expect = 8.7e-61
Identity = 123/244 (50.41%), Postives = 167/244 (68.44%), Query Frame = 0


Query: 3   DISDTTAGNVEGDGKDAPCTSCDRQTLLHQSMGGGK----------------------AA 62
           DI     G  EG G  +      RQ  +HQ MGGGK                      AA
Sbjct: 6   DIDGDFDGRNEG-GSSSDYRLLGRQITVHQFMGGGKGEFFFPEFHFGYSRKWKTWQFIAA 65

Query: 63  DILLWKQRHVSFGIVVVATVFWLLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQ 122
           D+LLW++RH+S G+++++TV WL+ E+SGLP L+  SDVLLI++++ F+ A  +AFRN+Q
Sbjct: 66  DLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQ 125

Query: 123 LQTLPQLALSEEFVNNVAASLRAKINNTLLMAHEITLGNDFKLFFR-MVIGLWLLSVMGS 182
           L +LP+L LSEE VN+ AAS R K+N+ L+MAH++T+GNDF+LFF+ +VI LWLLS +GS
Sbjct: 126 LHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKQVVICLWLLSAIGS 185

Query: 183 YVSFFTFAYIGTIISITIPALYSKYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSLS 224
           Y+S  T  YIGTI+S+TIPALYSKY   VD+ CG I ++   HY+++DE+V SRL  SLS
Sbjct: 186 YISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLS 245

[Close]

BLAST of Bhi04G001839 vs. TAIR 10
Match: AT3G10915.3 (Reticulon family protein )

HSP 1 Score: 228.8 bits (582), Expect = 4.3e-60
Identity = 108/185 (58.38%), Postives = 150/185 (81.08%), Query Frame = 0


Query: 39  AADILLWKQRHVSFGIVVVATVFWLLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRN 98
           AAD+LLW++RH+S G+++++TV WL+ E+SGLP L+  SDVLLI++++ F+ A  +AFRN
Sbjct: 8   AADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRN 67

Query: 99  KQLQTLPQLALSEEFVNNVAASLRAKINNTLLMAHEITLGNDFKLFFRMVIGLWLLSVMG 158
           +QL +LP+L LSEE VN+ AAS R K+N+ L+MAH++T+GNDF+LFF++VI LWLLS +G
Sbjct: 68  RQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIG 127

Query: 159 SYVSFFTFAYIGTIISITIPALYSKYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSL 218
           SY+S  T  YIGTI+S+TIPALYSKY   VD+ CG I ++   HY+++DE+V SRL  SL
Sbjct: 128 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSL 187

Query: 219 SKDKD 224
           SKDKD
Sbjct: 188 SKDKD 192

[Close]

BLAST of Bhi04G001839 vs. TAIR 10
Match: AT3G10915.6 (Reticulon family protein )

HSP 1 Score: 228.8 bits (582), Expect = 4.3e-60
Identity = 108/185 (58.38%), Postives = 150/185 (81.08%), Query Frame = 0


Query: 39  AADILLWKQRHVSFGIVVVATVFWLLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRN 98
           AAD+LLW++RH+S G+++++TV WL+ E+SGLP L+  SDVLLI++++ F+ A  +AFRN
Sbjct: 9   AADLLLWRRRHLSLGVIIISTVAWLIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRN 68

Query: 99  KQLQTLPQLALSEEFVNNVAASLRAKINNTLLMAHEITLGNDFKLFFRMVIGLWLLSVMG 158
           +QL +LP+L LSEE VN+ AAS R K+N+ L+MAH++T+GNDF+LFF++VI LWLLS +G
Sbjct: 69  RQLHSLPELVLSEEMVNSAAASFRIKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIG 128

Query: 159 SYVSFFTFAYIGTIISITIPALYSKYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSL 218
           SY+S  T  YIGTI+S+TIPALYSKY   VD+ CG I ++   HY+++DE+V SRL  SL
Sbjct: 129 SYISLCTLLYIGTILSVTIPALYSKYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSL 188

Query: 219 SKDKD 224
           SKDKD
Sbjct: 189 SKDKD 193

[Close]

BLAST of Bhi04G001839 vs. ExPASy Swiss-Prot
Match: Q8GYH6 (Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 7.4e-65
Identity = 123/221 (55.66%), Postives = 167/221 (75.57%), Query Frame = 0


Query: 3   DISDTTAGNVEGDGKDAPCTSCDRQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATVFW 62
           DI     G  EG G  +      RQ  +HQ MGGGKAAD+LLW++RH+S G+++++TV W
Sbjct: 6   DIDGDFDGRNEG-GSSSDYRLLGRQITVHQFMGGGKAADLLLWRRRHLSLGVIIISTVAW 65

Query: 63  LLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAASLR 122
           L+ E+SGLP L+  SDVLLI++++ F+ A  +AFRN+QL +LP+L LSEE VN+ AAS R
Sbjct: 66  LIFEFSGLPFLSVSSDVLLIVIMISFVHARVSAFRNRQLHSLPELVLSEEMVNSAAASFR 125

Query: 123 AKINNTLLMAHEITLGNDFKLFFRMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPALYS 182
            K+N+ L+MAH++T+GNDF+LFF++VI LWLLS +GSY+S  T  YIGTI+S+TIPALYS
Sbjct: 126 IKLNHLLVMAHDVTVGNDFRLFFKVVICLWLLSAIGSYISLCTLLYIGTILSVTIPALYS 185

Query: 183 KYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKD 224
           KY   VD+ CG I ++   HY+++DE+V SRL  SLSKDKD
Sbjct: 186 KYQSKVDKCCGTIHRRLSHHYKIVDENVISRLSWSLSKDKD 225

[Close]

BLAST of Bhi04G001839 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.4e-32
Identity = 74/197 (37.56%), Postives = 113/197 (57.36%), Query Frame = 0


Query: 26  RQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATVFWLLIEYSGLPLLTTCSDVLLILVV 85
           R+  +H+ +GGGK ADI +WK + +S G+   ATV W+L E     LLT    V+++ + 
Sbjct: 72  RERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALA 131

Query: 86  LLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAASLRAKINNTLLMAHEITLGNDFKLFF 145
           +LFL +N   F +K    +P++ + EE +  +A+ LR +IN  +    EI  G D K F 
Sbjct: 132 VLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFL 191

Query: 146 RMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPALYSKYDEHVDRYCGMIRQQFRKHYRV 205
             + GLW+LS++G   SF T AYI  ++  T+P  Y KY++ VD Y      + +K Y V
Sbjct: 192 SAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAV 251

Query: 206 MDESVFSRLPGSLSKDK 223
           +D  VFS++P    KDK
Sbjct: 252 LDAKVFSKIPRGPLKDK 268

[Close]

BLAST of Bhi04G001839 vs. ExPASy Swiss-Prot
Match: Q6DBN4 (Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.0e-30
Identity = 68/197 (34.52%), Postives = 113/197 (57.36%), Query Frame = 0


Query: 26  RQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATVFWLLIEYSGLPLLTTCSDVLLILVV 85
           R+  +H+ +GGG  AD+ LW+ + +S  ++ VAT  W+L E      L+    +L+  + 
Sbjct: 55  REKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALA 114

Query: 86  LLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAASLRAKINNTLLMAHEITLGNDFKLFF 145
            LFL +N  AF NK    +P++ + EE    + ++LR ++N   ++   I LG D K F 
Sbjct: 115 ALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFL 174

Query: 146 RMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPALYSKYDEHVDRYCGMIRQQFRKHYRV 205
            +V GLW++SV+G++ +F T  YI  ++  T+P LY K+++ VD       ++ +KHY V
Sbjct: 175 MVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMV 234

Query: 206 MDESVFSRLPGSLSKDK 223
            DE V S+LP +  K K
Sbjct: 235 FDEKVLSKLPVASLKAK 251

[Close]

BLAST of Bhi04G001839 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 2.3e-29
Identity = 70/197 (35.53%), Postives = 112/197 (56.85%), Query Frame = 0


Query: 26  RQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATVFWLLIEYSGLPLLTTCSDVLLILVV 85
           R+  +H+ +GGGK ADI +WK + +S G++  AT  W++ E     LLT    V+++++ 
Sbjct: 76  REQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLA 135

Query: 86  LLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAASLRAKINNTLLMAHEITLGNDFKLFF 145
           +LFL +N   F NK    +P++ + EE +  +A+ LR +IN       EI  G D K F 
Sbjct: 136 VLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFL 195

Query: 146 RMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPALYSKYDEHVDRYCGMIRQQFRKHYRV 205
             + GLW+LS++G   +F T AYI  ++  T+P  Y KY++ VD        + +K Y V
Sbjct: 196 IAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAV 255

Query: 206 MDESVFSRLPGSLSKDK 223
           +DE V S++P    K+K
Sbjct: 256 LDEKVLSKIPLGPLKNK 272

[Close]

BLAST of Bhi04G001839 vs. ExPASy Swiss-Prot
Match: Q9FFS0 (Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.5e-28
Identity = 72/203 (35.47%), Postives = 113/203 (55.67%), Query Frame = 0


Query: 26  RQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATVFWLLIEYSGLPLLTTCSDVLLILVV 85
           R+  +H+ +GGGK ADI LW+ + VS G++   T  W+L E     LL       +  + 
Sbjct: 55  REKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALA 114

Query: 86  LLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAASLRAKINNTLLMAHEITLGNDFKLFF 145
            LFL +N   F +K    +P++ + E+ +  + + LR +IN  L +   I  G D K F 
Sbjct: 115 ALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFI 174

Query: 146 RMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPALYSKYDEHVDRYCGMIRQQFRKHYRV 205
            ++ GLW+LS++GS  +F T  Y  T++  TIP LY KY++ VD Y     ++ +K Y V
Sbjct: 175 LVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAV 234

Query: 206 MDE----SVFSRLP-GSLSKDKD 224
           +DE     V S++P G+L+K KD
Sbjct: 235 LDEKVLRKVISKIPRGALNKKKD 257

[Close]

BLAST of Bhi04G001839 vs. ExPASy TrEMBL
Match: A0A5A7U9N4 (Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001790 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.8e-112
Identity = 210/224 (93.75%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MVDISDTTAGNVEGDGKDAPCTSCDRQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATV 60
           MVD+SDT AGNVE DGKD PCTSCDRQTLLHQSMGGGKAADILLWKQ HVSFGI+VV+TV
Sbjct: 1   MVDLSDTAAGNVEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSFGIIVVSTV 60

Query: 61  FWLLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAAS 120
           FWLLIE+SGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQL LSEEFVNNVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 LRAKINNTLLMAHEITLGNDFKLFFRMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPAL 180
           LRAKINNTLLMAH+ITLGNDFKLFFRMVIGLWLLSV+GSYVSFFTFAYIGTIISITIPAL
Sbjct: 121 LRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGTIISITIPAL 180

Query: 181 YSKYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKDQ 225
           YSKYD+HVDRYCGMIRQQFRKHYRVMDESVFSRLPG+LSKDK+Q
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGNLSKDKNQ 224

[Close]

BLAST of Bhi04G001839 vs. ExPASy TrEMBL
Match: A0A1S3C5B5 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496616 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.8e-112
Identity = 210/224 (93.75%), Postives = 219/224 (97.77%), Query Frame = 0


Query: 1   MVDISDTTAGNVEGDGKDAPCTSCDRQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATV 60
           MVD+SDT AGNVE DGKD PCTSCDRQTLLHQSMGGGKAADILLWKQ HVSFGI+VV+TV
Sbjct: 1   MVDLSDTAAGNVEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSFGIIVVSTV 60

Query: 61  FWLLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAAS 120
           FWLLIE+SGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQL LSEEFVNNVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 LRAKINNTLLMAHEITLGNDFKLFFRMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPAL 180
           LRAKINNTLLMAH+ITLGNDFKLFFRMVIGLWLLSV+GSYVSFFTFAYIGTIISITIPAL
Sbjct: 121 LRAKINNTLLMAHDITLGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYIGTIISITIPAL 180

Query: 181 YSKYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKDQ 225
           YSKYD+HVDRYCGMIRQQFRKHYRVMDESVFSRLPG+LSKDK+Q
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGNLSKDKNQ 224

[Close]

BLAST of Bhi04G001839 vs. ExPASy TrEMBL
Match: A0A0A0KBS2 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G014530 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.9e-109
Identity = 203/224 (90.62%), Postives = 216/224 (96.43%), Query Frame = 0


Query: 1   MVDISDTTAGNVEGDGKDAPCTSCDRQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATV 60
           MVD+S+T AG+ E DGKD PCTSCDRQTLLHQSMGGGKAADILLWKQ HVS G++VV+TV
Sbjct: 1   MVDLSETAAGSAEADGKDIPCTSCDRQTLLHQSMGGGKAADILLWKQWHVSIGVLVVSTV 60

Query: 61  FWLLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAAS 120
           FWLLIE+SGLPLLTTCSDVLLILVVLLFLRAN+AAFRNKQLQTLPQL LSEEFVNNVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLILVVLLFLRANFAAFRNKQLQTLPQLVLSEEFVNNVAAS 120

Query: 121 LRAKINNTLLMAHEITLGNDFKLFFRMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPAL 180
           LRAKINNTLLMAH+IT+GNDFKLFFRMVIGLWLLSV+GSYVSFFTFAY+GTIISITIPAL
Sbjct: 121 LRAKINNTLLMAHDITVGNDFKLFFRMVIGLWLLSVVGSYVSFFTFAYVGTIISITIPAL 180

Query: 181 YSKYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKDQ 225
           YSKYD+HVDRYCGMIRQQFRKHYRVMDESVFSRLPG LSKDKDQ
Sbjct: 181 YSKYDKHVDRYCGMIRQQFRKHYRVMDESVFSRLPGGLSKDKDQ 224

[Close]

BLAST of Bhi04G001839 vs. ExPASy TrEMBL
Match: A0A6J1K105 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489673 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.0e-101
Identity = 196/224 (87.50%), Postives = 208/224 (92.86%), Query Frame = 0


Query: 1   MVDISDTTAGNVEGDGKDAPCTSCDRQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATV 60
           MVD  D +AGNV+GDGKD  CTSCDR   LHQSMGGGKAADILLWKQRHVSFGIVVVATV
Sbjct: 1   MVDNCD-SAGNVDGDGKDIACTSCDRPASLHQSMGGGKAADILLWKQRHVSFGIVVVATV 60

Query: 61  FWLLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAAS 120
           FWLLIE+SGLPLLTTCSDVLL+LVVLLFLRAN+AAFR KQLQTLPQL LSEEFV+NVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRKKQLQTLPQLVLSEEFVDNVAAS 120

Query: 121 LRAKINNTLLMAHEITLGNDFKLFFRMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPAL 180
            RAKINN LL+AH+ITLGNDFKLFFRMVI LWLLSV+GSY+SFFTFAYIGTIISIT+PAL
Sbjct: 121 FRAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLGSYLSFFTFAYIGTIISITVPAL 180

Query: 181 YSKYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKDQ 225
           YSKYD+HVDR CGMIRQQFRKHYRVMDE VFSRLPGSLSKDK Q
Sbjct: 181 YSKYDKHVDRCCGMIRQQFRKHYRVMDERVFSRLPGSLSKDKHQ 223

[Close]

BLAST of Bhi04G001839 vs. ExPASy TrEMBL
Match: A0A6J1FJV2 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444692 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.3e-101
Identity = 197/224 (87.95%), Postives = 208/224 (92.86%), Query Frame = 0


Query: 1   MVDISDTTAGNVEGDGKDAPCTSCDRQTLLHQSMGGGKAADILLWKQRHVSFGIVVVATV 60
           MVD  D +AGNV+ DGKD  CTSCDR   LHQSMGGGKAADILLWKQRHVSFGIVVVATV
Sbjct: 1   MVDNCD-SAGNVDADGKDIACTSCDRPPSLHQSMGGGKAADILLWKQRHVSFGIVVVATV 60

Query: 61  FWLLIEYSGLPLLTTCSDVLLILVVLLFLRANYAAFRNKQLQTLPQLALSEEFVNNVAAS 120
           FWLLIE+SGLPLLTTCSDVLL+LVVLLFLRAN+AAFR KQLQTLPQL LSEEFV+NVAAS
Sbjct: 61  FWLLIEHSGLPLLTTCSDVLLVLVVLLFLRANFAAFRKKQLQTLPQLVLSEEFVDNVAAS 120

Query: 121 LRAKINNTLLMAHEITLGNDFKLFFRMVIGLWLLSVMGSYVSFFTFAYIGTIISITIPAL 180
            RAKINN LL+AH+ITLGNDFKLFFRMVI LWLLSV+GSY+SFFTFAYIGTIISITIPAL
Sbjct: 121 FRAKINNALLVAHDITLGNDFKLFFRMVICLWLLSVLGSYLSFFTFAYIGTIISITIPAL 180

Query: 181 YSKYDEHVDRYCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKDQ 225
           YSKYD+HVDR CGMIRQQFRKHYRVMDESVFSRLPGSLSKDK Q
Sbjct: 181 YSKYDKHVDRCCGMIRQQFRKHYRVMDESVFSRLPGSLSKDKHQ 223

The following BLAST results are available for this feature:

BLAST of Bhi04G001839 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10915.2	5.3e-66	55.66	Reticulon family protein	[more]
AT3G10915.4	1.3e-64	55.41	Reticulon family protein	[more]
AT3G10915.5	8.7e-61	50.41	Reticulon family protein	[more]
AT3G10915.3	4.3e-60	58.38	Reticulon family protein	[more]
AT3G10915.6	4.3e-60	58.38	Reticulon family protein	[more]

BLAST of Bhi04G001839 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYH6	7.4e-65	55.66	Reticulon-like protein B16 OS=Arabidopsis thaliana OX=3702 GN=RTNLB16 PE=2 SV=1	[more]
Q9SUT9	6.4e-32	37.56	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
Q6DBN4	6.0e-30	34.52	Reticulon-like protein B6 OS=Arabidopsis thaliana OX=3702 GN=RTNLB6 PE=1 SV=1	[more]
Q9SUR3	2.3e-29	35.53	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
Q9FFS0	1.5e-28	35.47	Reticulon-like protein B4 OS=Arabidopsis thaliana OX=3702 GN=RTNLB4 PE=1 SV=1	[more]

BLAST of Bhi04G001839 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U9N4	3.8e-112	93.75	Reticulon-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4...	[more]
A0A1S3C5B5	3.8e-112	93.75	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103496616 PE=4 SV=1	[more]
A0A0A0KBS2	3.9e-109	90.63	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G014530 PE=4 SV=1	[more]
A0A6J1K105	1.0e-101	87.50	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489673 PE=4 SV=1	[more]
A0A6J1FJV2	1.3e-101	87.95	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111444692 PE=4 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 40..193 e-value: 2.4E-44 score: 151.1
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 39..224 score: 30.336859
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 18..223
None	No IPR available	PANTHER	PTHR10994:SF67	RETICULON-LIKE PROTEIN B16	coord: 18..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001839	Bhi04M001839	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane