Bhi04G001720 (gene) Wax gourd (B227) v1

Overview
NameBhi04G001720
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr4: 58424724 .. 58425101 (-)
RNA-Seq ExpressionBhi04G001720
SyntenyBhi04G001720
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACACGTTGTTTCGGTTTTAGAAGAGTCTTCATGTGGGTTCAAAGCCATGGCCAAAAGCAAGGCATTGCTTAAAGGGAAAAGGGCAGTGGTGGCCATGATTCTTTTCTTGTCCTTCACTTTGTCCTACGGAGTAGTTCACGTCGTGTTGTGTAATTATATGTCTGTCATTGTTCGGTGGCTACCATTGGGAGTTGTGGGAAGGGTTATTGTGGGGATTATTTGGTTTTTGTCGTTTTTGTTGAATCATTTGATCAAGCTTGTGGCGAAAACTGTGCTGTATTTCGTCTGCAAATCGTATCACAAGGAGAAAGTCGACATGTCGGCTCTGTCAAATCATCTTCAAGGTAGTCTCCTTGCAGATTACCTTCCTTGA

mRNA sequence

ATGTCACACGTTGTTTCGGTTTTAGAAGAGTCTTCATGTGGGTTCAAAGCCATGGCCAAAAGCAAGGCATTGCTTAAAGGGAAAAGGGCAGTGGTGGCCATGATTCTTTTCTTGTCCTTCACTTTGTCCTACGGAGTAGTTCACGTCGTGTTGTGTAATTATATGTCTGTCATTGTTCGGTGGCTACCATTGGGAGTTGTGGGAAGGGTTATTGTGGGGATTATTTGGTTTTTGTCGTTTTTGTTGAATCATTTGATCAAGCTTGTGGCGAAAACTGTGCTGTATTTCGTCTGCAAATCGTATCACAAGGAGAAAGTCGACATGTCGGCTCTGTCAAATCATCTTCAAGGTAGTCTCCTTGCAGATTACCTTCCTTGA

Coding sequence (CDS)

ATGTCACACGTTGTTTCGGTTTTAGAAGAGTCTTCATGTGGGTTCAAAGCCATGGCCAAAAGCAAGGCATTGCTTAAAGGGAAAAGGGCAGTGGTGGCCATGATTCTTTTCTTGTCCTTCACTTTGTCCTACGGAGTAGTTCACGTCGTGTTGTGTAATTATATGTCTGTCATTGTTCGGTGGCTACCATTGGGAGTTGTGGGAAGGGTTATTGTGGGGATTATTTGGTTTTTGTCGTTTTTGTTGAATCATTTGATCAAGCTTGTGGCGAAAACTGTGCTGTATTTCGTCTGCAAATCGTATCACAAGGAGAAAGTCGACATGTCGGCTCTGTCAAATCATCTTCAAGGTAGTCTCCTTGCAGATTACCTTCCTTGA

Protein sequence

MSHVVSVLEESSCGFKAMAKSKALLKGKRAVVAMILFLSFTLSYGVVHVVLCNYMSVIVRWLPLGVVGRVIVGIIWFLSFLLNHLIKLVAKTVLYFVCKSYHKEKVDMSALSNHLQGSLLADYLP
Homology
BLAST of Bhi04G001720 vs. TAIR 10
Match: AT4G19950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44860.1); Has 338 Blast hits to 330 proteins in 72 species: Archae - 2; Bacteria - 94; Metazoa - 7; Fungi - 0; Plants - 232; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-08
Identity = 45/131 (34.35%), Postives = 74/131 (56.49%), Query Frame = 0

Query: 1   MSHVVSVLEESSCGFKAMAKSKALLKGKRAVVAMILFLSFTLSYGVVHVVLCNYM----- 60
           ++ VVSVL E   G  AM KS  LLKGK  +   ++F         +++V C ++     
Sbjct: 190 LASVVSVL-EPIYGLAAMKKSYELLKGKTLMACSMVF---------IYLVHCGFIAGVFG 249

Query: 61  SVIVR-WLPLGVVGRVIVGIIWFLSFLLNHLIKLVAKTVLYFVCKSYHKEKVDMSALSNH 120
           +V+VR     G+  R++ G       ++ +LI L+ ++V Y+VCKS+H +++D SAL +H
Sbjct: 250 AVVVRGGDDYGIFARIVAGGFLVGVLVIVNLIGLLVQSVFYYVCKSFHHQEIDKSALHDH 309

Query: 121 LQGSLLADYLP 126
           L G  L +Y+P
Sbjct: 310 L-GGYLGEYVP 309

BLAST of Bhi04G001720 vs. TAIR 10
Match: AT1G31130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 6.9e-07
Identity = 42/131 (32.06%), Postives = 69/131 (52.67%), Query Frame = 0

Query: 1   MSHVVSVLEESSCGFKAMAKSKALLKGKRAVVAMILFLSFTLSYGVVHVVLCNYMSVIVR 60
           +  V+SVL E   G  AM K+  LLKGK  +   ++F         V++ LC  + V+  
Sbjct: 190 LGSVISVL-EPVYGIAAMRKAYELLKGKTKMAMGLIF---------VYLFLCGLIGVVFG 249

Query: 61  WLPL------GVVGRVIVGIIWFLSFLLNHLIKLVAKTVLYFVCKSYHKEKVDMSALSNH 120
            + +      G   R +VG +     ++ +L+ L+ ++V Y+VCKSYH + +D +AL + 
Sbjct: 250 AVVVHGGGKYGTFTRTLVGGLLVGVLVMVNLVGLLVQSVFYYVCKSYHHQTIDKTALYDQ 309

Query: 121 LQGSLLADYLP 126
           L G  L DY+P
Sbjct: 310 L-GGYLGDYVP 309

BLAST of Bhi04G001720 vs. TAIR 10
Match: AT5G44860.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits to 227 proteins in 25 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 1.5e-06
Identity = 42/125 (33.60%), Postives = 68/125 (54.40%), Query Frame = 0

Query: 1   MSHVVSVLEESSCGFKAMAKSKALLKGKRAVVAMILFLSFTLSYGVVHVVLCNYMSVIVR 60
           ++ VVSVL E   G  AM KS  LL G+  +   ++F+   L  G+   V      V+  
Sbjct: 190 LASVVSVL-EPIYGIAAMKKSYELLNGRTNMACSMVFMYLALC-GITAGVFGGV--VVHG 249

Query: 61  WLPLGVVGRVIVGIIWFLSFLLNHLIKLVAKTVLYFVCKSYHKEKVDMSALSNHLQGSLL 120
               G+  +++VG       ++ +L+ L+ ++V Y+VCKS+H + +D SAL +HL G  L
Sbjct: 250 GDDFGLFTKIVVGGFLVGILVIVNLVGLLVQSVFYYVCKSFHHQPIDKSALHDHL-GGYL 309

Query: 121 ADYLP 126
            DY+P
Sbjct: 310 GDYVP 309

BLAST of Bhi04G001720 vs. ExPASy TrEMBL
Match: A0A6J1DJN3 (uncharacterized protein LOC111021150 OS=Momordica charantia OX=3673 GN=LOC111021150 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20
Identity = 67/124 (54.03%), Postives = 88/124 (70.97%), Query Frame = 0

Query: 1   MSHVVSVLEESSCGFKAMAKSKALLKGKRAVVAMILFLSFTLSYGVVHVVLCNYMSVIVR 60
           +S VVS LE   CGFKAMAKSKAL++G+  +V  +L L   L   VV  V   +  ++V+
Sbjct: 216 LSSVVSALELDCCGFKAMAKSKALVEGRMRMVLKLLAL-LNLPLVVVQFV---FYYLVVQ 275

Query: 61  WLPLGVVGRVIVGIIWFLSFLLNHLIKLVAKTVLYFVCKSYHKEKVDMSALSNHLQGSLL 120
               G VGR I+GI+W L FL+ +L+KLVA+TVLYFVCKSY+ E VD SALS+HLQG L+
Sbjct: 276 SATTGAVGRGILGIVWVLLFLVLYLVKLVAETVLYFVCKSYNHESVDKSALSDHLQGYLM 335

Query: 121 ADYL 125
           A+Y+
Sbjct: 336 AEYV 335

BLAST of Bhi04G001720 vs. ExPASy TrEMBL
Match: A0A2P2JPF2 (Uncharacterized protein MANES_02G173000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.8e-18
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 0

Query: 1   MSHVVSVLEESSCGFKAMAKSKALLKGKRAVVAMILFLSFTLSYGVVHVVLCNYMSVIVR 60
           +  VVSVLEE+S GFKAMAKSKAL++GK   +A+I+F    LS+  + ++   +  ++V 
Sbjct: 201 LGSVVSVLEEAS-GFKAMAKSKALIRGK-TWIAVIIFFKLNLSFVAIQII---FSRLVVH 260

Query: 61  WLPLGVVGRVIVGIIWFLSFLLNHLIKLVAKTVLYFVCKSYHKEKVDMSALSNHLQGSLL 120
            + L VV ++I G+I FL     +L  LV +TVLYFVCKSYH E +D SALSNHL+  LL
Sbjct: 261 GVSLAVVDKIIFGVICFLLLCKLYLFLLVIQTVLYFVCKSYHHENIDKSALSNHLEVYLL 320

Query: 121 ADYLP 126
            +Y+P
Sbjct: 321 GEYVP 320

BLAST of Bhi04G001720 vs. ExPASy TrEMBL
Match: A0A6J1EKL5 (uncharacterized protein LOC111433439 OS=Cucurbita moschata OX=3662 GN=LOC111433439 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 3.0e-18
Identity = 63/125 (50.40%), Postives = 89/125 (71.20%), Query Frame = 0

Query: 1   MSHVVSVLEESSCGFKAMAKSKALLKGKRAVVAMILFLSFTLSYGVVHVVLCNYMSVIVR 60
           +S+VVSVLE+ S GFKAMAKS AL+KGK   +++++ L  +L  G V  +   +  ++VR
Sbjct: 115 LSNVVSVLED-SYGFKAMAKSYALVKGKLG-ISVVIILLLSLPLGTVRFM---FGHLVVR 174

Query: 61  WLPLGVVGRVIVGIIWFLSFLLNHLIKLVAKTVLYFVCKSYHKEKVDMSALSNHLQGSLL 120
              LGVV + ++GI+ FL F + +L+KLV +TVLYFVCKSYH E +D SALS+HL   LL
Sbjct: 175 AAALGVVSKGVLGILCFLLFFVFYLLKLVTETVLYFVCKSYHHENIDKSALSDHLGEYLL 234

Query: 121 ADYLP 126
            +Y+P
Sbjct: 235 GEYVP 234

BLAST of Bhi04G001720 vs. ExPASy TrEMBL
Match: A0A5A7V1U2 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00470 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17
Identity = 62/117 (52.99%), Postives = 80/117 (68.38%), Query Frame = 0

Query: 1   MSHVVSVLEESSCGFKAMAKSKALLKGKRAVVAMILFLSFTLSYGVVHVVLCNYMSVIVR 60
           +S VV+VLE+ SCGFKAMAKSK LLKGK  +V M L++   L  GV+ +V  +Y  +   
Sbjct: 162 LSSVVAVLEK-SCGFKAMAKSKGLLKGKMKMVIM-LWVLLDLPLGVIQLVFLHYFVIRST 221

Query: 61  WLPLGVVGRVIVGIIWFLSFLLNHLIKLVAKTVLYFVCKSYHKEKVDMSALSNHLQG 118
           W     VGR I+GI W L F++  L+KLV +TV+YFVCK +H E+VD  AL NHLQG
Sbjct: 222 W-----VGRSILGICWVLLFMVFLLVKLVLETVVYFVCKLHHGERVDKLALWNHLQG 271

BLAST of Bhi04G001720 vs. ExPASy TrEMBL
Match: A0A6J1INB6 (uncharacterized protein LOC111476796 OS=Cucurbita maxima OX=3661 GN=LOC111476796 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 2.6e-17
Identity = 65/125 (52.00%), Postives = 84/125 (67.20%), Query Frame = 0

Query: 1   MSHVVSVLEESSCGFKAMAKSKALLKGKRAVVAMILFLSFTLSYGVVHVVLCNYMSVIVR 60
           +S VVSVLEE SCGFKAMAKSKALLKGK  +VA I+ L    S  ++      ++ ++V 
Sbjct: 201 LSSVVSVLEE-SCGFKAMAKSKALLKGK-MLVATIMLLLINASLVIIQQA---FLKLVVH 260

Query: 61  WLPLGVVGRVIVGIIWFLSFLLNHLIKLVAKTVLYFVCKSYHKEKVDMSALSNHLQGSLL 120
            +  G+VGR I+GI+     L   L +LV +TVLYFVCK +H+E +D SALSNHLQ  LL
Sbjct: 261 GVWFGMVGRGILGIVCLFLLLSFFLWQLVLETVLYFVCKEHHQENIDKSALSNHLQVYLL 320

Query: 121 ADYLP 126
             Y+P
Sbjct: 321 NGYVP 320

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G19950.11.6e-0834.35unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G31130.16.9e-0732.06unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G44860.11.5e-0633.60unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DJN31.9e-2054.03uncharacterized protein LOC111021150 OS=Momordica charantia OX=3673 GN=LOC111021... [more]
A0A2P2JPF21.8e-1849.60Uncharacterized protein MANES_02G173000 OS=Rhizophora mucronata OX=61149 PE=4 SV... [more]
A0A6J1EKL53.0e-1850.40uncharacterized protein LOC111433439 OS=Cucurbita moschata OX=3662 GN=LOC1114334... [more]
A0A5A7V1U22.6e-1752.99Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A6J1INB62.6e-1752.00uncharacterized protein LOC111476796 OS=Cucurbita maxima OX=3661 GN=LOC111476796... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33133:SF51PROTEIN, PUTATIVE-RELATEDcoord: 2..123
NoneNo IPR availablePANTHERPTHR33133OS08G0107100 PROTEIN-RELATEDcoord: 2..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001720Bhi04M001720mRNA