Bhi04G001686 (gene) Wax gourd (B227) v1

Overview
NameBhi04G001686
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr4: 57367493 .. 57367789 (+)
RNA-Seq ExpressionBhi04G001686
SyntenyBhi04G001686
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCTAGCCATAAGCTATGGCAGCTCCAGCTCGCAACCACAGGGGCTCAGCGGTCAGGTCCCCCCCATTCGAATTACGTTAGGAGGTCTTTCGCTTTTGCCAGATCTAGAGAGATACTACGAGTCCTCCGTCCCAGATTCCATCGCCGCGGCCATCTGGTTCACCGGTACTACCAAAAAGTCTCATGCTTACGTTACTGTTATTGATGGTTTGATTATCTTGGACCCCGGTCGTGCTTCTGGTTTCCATTCCCATCATCATATTGATGATAAATCCCCTCGTGCTCCGCCATAA

mRNA sequence

ATGGCTCTAGCCATAAGCTATGGCAGCTCCAGCTCGCAACCACAGGGGCTCAGCGGTCAGGTCCCCCCCATTCGAATTACGTTAGGAGGTCTTTCGCTTTTGCCAGATCTAGAGAGATACTACGAGTCCTCCGTCCCAGATTCCATCGCCGCGGCCATCTGGTTCACCGGTACTACCAAAAAGTCTCATGCTTACGTTACTGTTATTGATGGTTTGATTATCTTGGACCCCGGTCGTGCTTCTGGTTTCCATTCCCATCATCATATTGATGATAAATCCCCTCGTGCTCCGCCATAA

Coding sequence (CDS)

ATGGCTCTAGCCATAAGCTATGGCAGCTCCAGCTCGCAACCACAGGGGCTCAGCGGTCAGGTCCCCCCCATTCGAATTACGTTAGGAGGTCTTTCGCTTTTGCCAGATCTAGAGAGATACTACGAGTCCTCCGTCCCAGATTCCATCGCCGCGGCCATCTGGTTCACCGGTACTACCAAAAAGTCTCATGCTTACGTTACTGTTATTGATGGTTTGATTATCTTGGACCCCGGTCGTGCTTCTGGTTTCCATTCCCATCATCATATTGATGATAAATCCCCTCGTGCTCCGCCATAA

Protein sequence

MALAISYGSSSSQPQGLSGQVPPIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIILDPGRASGFHSHHHIDDKSPRAPP
Homology
[Close]
BLAST of Bhi04G001686 vs. ExPASy TrEMBL
Match: A0A6N2N869 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS478068 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 6.0e-38
Identity = 87/109 (79.82%), Postives = 92/109 (84.40%), Query Frame = 0 

Query: 1   MALAISYGSSSSQPQG--------LSGQVPPIRITLGGLSLLPDLERYYESSVPDSIAAA 60
           +A AISYGSSSSQP+         ++ +  PIRITLGGLSLLPDLERYYESSVPDSIAAA
Sbjct: 45  IARAISYGSSSSQPRDGGPPCEARVAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAAA 104

Query: 61  IWFTGTTKKSHAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP 99
           IWFTGTTKKSHAYVTVIDGLIIL   DPGRASGFHSHHHID KSPRAPP
Sbjct: 105 IWFTGTTKKSHAYVTVIDGLIILDHEDPGRASGFHSHHHIDGKSPRAPP 153

[Close]
BLAST of Bhi04G001686 vs. ExPASy TrEMBL
Match: A0A6N2KAQ9 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS49781 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 87/109 (79.82%), Postives = 91/109 (83.49%), Query Frame = 0 

Query: 1   MALAISYGSSSSQPQG--------LSGQVPPIRITLGGLSLLPDLERYYESSVPDSIAAA 60
           +A AISYGSSSSQP+          + +  PIRITLGGLSLLPDLERYYESSVPDSIAAA
Sbjct: 45  IARAISYGSSSSQPRDGARHARPEWAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAAA 104

Query: 61  IWFTGTTKKSHAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP 99
           IWFTGTTKKSHAYVTVIDGLIIL   DPGRASGFHSHHHID KSPRAPP
Sbjct: 105 IWFTGTTKKSHAYVTVIDGLIILDHEDPGRASGFHSHHHIDGKSPRAPP 153

[Close]
BLAST of Bhi04G001686 vs. ExPASy TrEMBL
Match: A0A6N2MV23 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS415107 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.3e-36
Identity = 86/110 (78.18%), Postives = 91/110 (82.73%), Query Frame = 0 

Query: 1   MALAISYGSSSS---------QPQGLSGQVPPIRITLGGLSLLPDLERYYESSVPDSIAA 60
           +A AISYGSSSS         +P+  + +  PIRITLGGLSLLPDLERYYESSVPDSIAA
Sbjct: 45  IARAISYGSSSSHHGTGARHARPE-WAQRSAPIRITLGGLSLLPDLERYYESSVPDSIAA 104

Query: 61  AIWFTGTTKKSHAYVTVIDGLIIL---DPGRASGFHSHHHIDDKSPRAPP 99
           AIWFTGTTKKSHAYVTVIDGLIIL   DPGRASGFHSHHHID KSPRAPP
Sbjct: 105 AIWFTGTTKKSHAYVTVIDGLIILDHEDPGRASGFHSHHHIDGKSPRAPP 153

[Close]
BLAST of Bhi04G001686 vs. ExPASy TrEMBL
Match: A0A6N2KU69 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS115143 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.3e-34
Identity = 75/79 (94.94%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 23  PIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIIL---DPGR 82
           PIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIIL   DPGR
Sbjct: 25  PIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIILDHEDPGR 84

Query: 83  ASGFHSHHHIDDKSPRAPP 99
           ASGFHSHHHID KSPRAPP
Sbjct: 85  ASGFHSHHHIDGKSPRAPP 103

[Close]
BLAST of Bhi04G001686 vs. ExPASy TrEMBL
Match: A0A6M2EB46 (Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.3e-34
Identity = 75/79 (94.94%), Postives = 75/79 (94.94%), Query Frame = 0 

Query: 23  PIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIIL---DPGR 82
           PIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIIL   DPGR
Sbjct: 25  PIRITLGGLSLLPDLERYYESSVPDSIAAAIWFTGTTKKSHAYVTVIDGLIILDHEDPGR 84

Query: 83  ASGFHSHHHIDDKSPRAPP 99
           ASGFHSHHHID KSPRAPP
Sbjct: 85  ASGFHSHHHIDGKSPRAPP 103

The following BLAST results are available for this feature:
BLAST of Bhi04G001686 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G001686 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G001686 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6N2N8696.0e-3879.82Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS478068 PE=4 SV=... [more]
A0A6N2KAQ91.3e-3779.82Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS49781 PE=4 SV=1[more]
A0A6N2MV237.3e-3678.18Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS415107 PE=4 SV=... [more]
A0A6N2KU695.3e-3494.94Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS115143 PE=4 SV=... [more]
A0A6M2EB465.3e-3494.94Uncharacterized protein OS=Populus davidiana OX=266767 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001686Bhi04M001686mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion