|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCTATTCTCTCTAACTTCTTAAACTCGACATCTCCGTTGCAATCCGCTACCACCACCACCACCACCATCGAATCCTTAGAATCGTCTATCCACGATGTTGTGAAACTCTACGAAAGACGTAAAAAATGGCGATCTCTATTCGTCGCCCCAAATACAAATAGTATCGACACATTTTCGTCATGGAGAGTCCATTTAATCACCTTACTCGAATCCACTCCCGCTCATGTCATCACCATTGTTCTCCTCGTAATGGACCTTATCATCACCGTTCTCGAACTTTCGTCGTCGTTAATATCTTGTGGATCACACGGGAAAGAAGAAGAAAAAATGTTGTACTTCCATTGGGTGAGCATTGCCATCTTGAGCTTTCTCTCCGCAAAGACGACAGCTCTGATGGTGGGGTTGGGCTGCTCGTTCTTTAGACGGTCAGGTTGCGTCGTGGATGGTGTGGTAGCGGTCGTGGCGTTGGTTTTGGAGGTGGCGGCGGAGAGGAAAGGCGGCGGAGTGATAATGATGGCAAGCTTGTGGAGGCTTGTGAGGGTGGTGGAGAGTGCTTTTGAGCTAAGTGATGATGCCATTGAAGTGAAGATTGAAGAAATAGTTTGGGAGTTAGAGAGAATGAAAGAAGAAATAAGAAGACAGAAAGAGAAGGATGAACTGATGGAGATGCTTTAA mRNA sequence ATGGCTATTCTCTCTAACTTCTTAAACTCGACATCTCCGTTGCAATCCGCTACCACCACCACCACCACCATCGAATCCTTAGAATCGTCTATCCACGATGTTGTGAAACTCTACGAAAGACGTAAAAAATGGCGATCTCTATTCGTCGCCCCAAATACAAATAGTATCGACACATTTTCGTCATGGAGAGTCCATTTAATCACCTTACTCGAATCCACTCCCGCTCATGTCATCACCATTGTTCTCCTCGTAATGGACCTTATCATCACCGTTCTCGAACTTTCGTCGTCGTTAATATCTTGTGGATCACACGGGAAAGAAGAAGAAAAAATGTTGTACTTCCATTGGGTGAGCATTGCCATCTTGAGCTTTCTCTCCGCAAAGACGACAGCTCTGATGGTGGGGTTGGGCTGCTCGTTCTTTAGACGGTCAGGTTGCGTCGTGGATGGTGTGGTAGCGGTCGTGGCGTTGGTTTTGGAGGTGGCGGCGGAGAGGAAAGGCGGCGGAGTGATAATGATGGCAAGCTTGTGGAGGCTTGTGAGGGTGGTGGAGAGTGCTTTTGAGCTAAGTGATGATGCCATTGAAGTGAAGATTGAAGAAATAGTTTGGGAGTTAGAGAGAATGAAAGAAGAAATAAGAAGACAGAAAGAGAAGGATGAACTGATGGAGATGCTTTAA Coding sequence (CDS) ATGGCTATTCTCTCTAACTTCTTAAACTCGACATCTCCGTTGCAATCCGCTACCACCACCACCACCACCATCGAATCCTTAGAATCGTCTATCCACGATGTTGTGAAACTCTACGAAAGACGTAAAAAATGGCGATCTCTATTCGTCGCCCCAAATACAAATAGTATCGACACATTTTCGTCATGGAGAGTCCATTTAATCACCTTACTCGAATCCACTCCCGCTCATGTCATCACCATTGTTCTCCTCGTAATGGACCTTATCATCACCGTTCTCGAACTTTCGTCGTCGTTAATATCTTGTGGATCACACGGGAAAGAAGAAGAAAAAATGTTGTACTTCCATTGGGTGAGCATTGCCATCTTGAGCTTTCTCTCCGCAAAGACGACAGCTCTGATGGTGGGGTTGGGCTGCTCGTTCTTTAGACGGTCAGGTTGCGTCGTGGATGGTGTGGTAGCGGTCGTGGCGTTGGTTTTGGAGGTGGCGGCGGAGAGGAAAGGCGGCGGAGTGATAATGATGGCAAGCTTGTGGAGGCTTGTGAGGGTGGTGGAGAGTGCTTTTGAGCTAAGTGATGATGCCATTGAAGTGAAGATTGAAGAAATAGTTTGGGAGTTAGAGAGAATGAAAGAAGAAATAAGAAGACAGAAAGAGAAGGATGAACTGATGGAGATGCTTTAA Protein sequence MAILSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAPNTNSIDTFSSWRVHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISCGSHGKEEEKMLYFHWVSIAILSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLVRVVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKDELMEML
Homology
BLAST of Bhi04G001667 vs. TAIR 10
Match: AT1G10800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 92.0 bits (227), Expect = 6.4e-19 Identity = 50/99 (50.51%), Postives = 77/99 (77.78%), Query Frame = 0 Query: 131 ALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLVRVVESAFELS 190 AL+V +G SFF++ GCV+DG +A+VAL+L+V E+KG G I++ SLWR++RVVE+AFELS Sbjct: 2 ALVVAMGKSFFKQPGCVMDGTLAIVALILQVLLEKKGTGFIVVVSLWRVLRVVETAFELS 61
Query: 191 DDAIEVKIEEIVWELERMKEE----IRRQKEKDELMEML 226 D+AIEV+I+ I+ + + + +E + EKDE+++ML Sbjct: 62 DEAIEVQIDGIISQFQALSKENRTLLETLAEKDEVIKML 100
BLAST of Bhi04G001667 vs. ExPASy TrEMBL
Match: A0A0A0KDR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022330 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.7e-91 Identity = 190/225 (84.44%), Postives = 205/225 (91.11%), Query Frame = 0 Query: 1 MAILSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAPNTNSIDTFS 60 MAILSNFLNS+SPLQS TT TTIESLESSIHDVVKLYERR+KWR+LF +P N+ D FS Sbjct: 1 MAILSNFLNSSSPLQS-VTTATTIESLESSIHDVVKLYERRRKWRALFFSPIPNNFDAFS 60
Query: 61 SWRVHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISCGSHGKEEEKMLYFHWVSIA 120 SWRVHLIT LESTPAH+ITI LLVMDLIITVLELSSSLISCGSHGK+EEK YFHWVSI+ Sbjct: 61 SWRVHLITFLESTPAHIITIFLLVMDLIITVLELSSSLISCGSHGKDEEKASYFHWVSIS 120
Query: 121 ILSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLV 180 ILSFLSAKT ALM+GLG SFFRR GCVVDGVVA+VALVLEV AERKGGGVIM+ASLWRLV Sbjct: 121 ILSFLSAKTAALMLGLGRSFFRRPGCVVDGVVAIVALVLEVVAERKGGGVIMVASLWRLV 180
Query: 181 RVVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKDELMEML 226 RVVESAFE+SDD IEVKIE IVWELE+MKEEIRR+KEKD + EML Sbjct: 181 RVVESAFEISDDTIEVKIEGIVWELEKMKEEIRREKEKDTI-EML 223
BLAST of Bhi04G001667 vs. ExPASy TrEMBL
Match: A0A5A7TIF8 (Voltage-gated hydrogen channel 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00070 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89 Identity = 181/225 (80.44%), Postives = 203/225 (90.22%), Query Frame = 0 Query: 1 MAILSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAPNTNSIDTFS 60 MAILSNFLNS+S LQS TT TTIESLE SIHD+ KLYERR+KWR+LF +P N+ DTFS Sbjct: 1 MAILSNFLNSSSTLQS-VTTATTIESLELSIHDIAKLYERRRKWRALFFSPIPNNFDTFS 60
Query: 61 SWRVHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISCGSHGKEEEKMLYFHWVSIA 120 SWRVHLIT LESTPAH+IT+ LLVMDLIIT+LELSSSLISCGSHGK+EEK YFHWVSI+ Sbjct: 61 SWRVHLITFLESTPAHIITVFLLVMDLIITLLELSSSLISCGSHGKDEEKASYFHWVSIS 120
Query: 121 ILSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLV 180 IL+FLSAK+ A+M+GLG SFFRR GCVVDGVVA+VAL+LE AERKGGGVIM+ASLWRLV Sbjct: 121 ILTFLSAKSAAVMLGLGLSFFRRPGCVVDGVVAIVALILEAVAERKGGGVIMVASLWRLV 180
Query: 181 RVVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKDELMEML 226 RVVESAFE+SDD IEVKIE IVWELERMKEEIRR+KEKD++ EML Sbjct: 181 RVVESAFEISDDVIEVKIEGIVWELERMKEEIRREKEKDKITEML 224
BLAST of Bhi04G001667 vs. ExPASy TrEMBL
Match: A0A1S3CLN2 (voltage-gated hydrogen channel 1 OS=Cucumis melo OX=3656 GN=LOC103502240 PE=4 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89 Identity = 181/225 (80.44%), Postives = 203/225 (90.22%), Query Frame = 0 Query: 1 MAILSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAPNTNSIDTFS 60 MAILSNFLNS+S LQS TT TTIESLE SIHD+ KLYERR+KWR+LF +P N+ DTFS Sbjct: 1 MAILSNFLNSSSTLQS-VTTATTIESLELSIHDIAKLYERRRKWRALFFSPIPNNFDTFS 60
Query: 61 SWRVHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISCGSHGKEEEKMLYFHWVSIA 120 SWRVHLIT LESTPAH+IT+ LLVMDLIIT+LELSSSLISCGSHGK+EEK YFHWVSI+ Sbjct: 61 SWRVHLITFLESTPAHIITVFLLVMDLIITLLELSSSLISCGSHGKDEEKASYFHWVSIS 120
Query: 121 ILSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLV 180 IL+FLSAK+ A+M+GLG SFFRR GCVVDGVVA+VAL+LE AERKGGGVIM+ASLWRLV Sbjct: 121 ILTFLSAKSAAVMLGLGLSFFRRPGCVVDGVVAIVALILEAVAERKGGGVIMVASLWRLV 180
Query: 181 RVVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKDELMEML 226 RVVESAFE+SDD IEVKIE IVWELERMKEEIRR+KEKD++ EML Sbjct: 181 RVVESAFEISDDVIEVKIEGIVWELERMKEEIRREKEKDKITEML 224
BLAST of Bhi04G001667 vs. ExPASy TrEMBL
Match: A0A6J1JZ21 (voltage-gated hydrogen channel 1 OS=Cucurbita maxima OX=3661 GN=LOC111488710 PE=4 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 1.1e-66 Identity = 146/224 (65.18%), Postives = 180/224 (80.36%), Query Frame = 0 Query: 4 LSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAPNTNSIDTFSSWR 63 +++ +S +P + +I++LE SI +V+KL +RR KW +LF P N+ + SSWR Sbjct: 1 MADLSSSPTPPEPPAAAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWR 60
Query: 64 VHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISCGS--HGKEEEKMLYFHWVSIAI 123 HLIT LESTP+H+ITIVLL+MDLI+TVLELSSSLISC S K EE+++ FHWVSIAI Sbjct: 61 SHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAI 120
Query: 124 LSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLVR 183 LS LS KT AL+VGLG SFFR+ GCVVDGVV VAL LEVAA+R+GGGVIM+ SLWR+VR Sbjct: 121 LSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVR 180
Query: 184 VVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKDELMEML 226 VVESAFELSDDAIE KIE IVWELE MKEEIRR+KEKDE+++++ Sbjct: 181 VVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDLV 224
BLAST of Bhi04G001667 vs. ExPASy TrEMBL
Match: A0A6J1D8I2 (uncharacterized protein LOC111018597 OS=Momordica charantia OX=3673 GN=LOC111018597 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 4.1e-66 Identity = 150/225 (66.67%), Postives = 181/225 (80.44%), Query Frame = 0 Query: 1 MAILSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAP---NTNSID 60 MA LSNF++ +SP Q A T + ++ESLE SI DV+KL E+R++WR+LF AP N N +D Sbjct: 1 MANLSNFVHRSSPPQPA-TGSPSLESLEFSIQDVIKLSEKRRRWRTLFAAPIQTNRNRLD 60
Query: 61 TFSSWRVHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISC---GSHGKEEEKMLYF 120 T + W+ L+ LESTPAHV+TI+LL+MDL ITVLELSSSLISC +H K +++LYF Sbjct: 61 TSAPWQTQLVAFLESTPAHVVTIILLLMDLTITVLELSSSLISCSLSANHKKGAKEVLYF 120
Query: 121 HWVSIAILSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMA 180 HWV IAILS LSAKT AL VGLG F R+ GC+VDGVVAVVALVLEV AERKGGGVI++A Sbjct: 121 HWVGIAILSLLSAKTVALAVGLGGLFLRQPGCIVDGVVAVVALVLEVVAERKGGGVIIVA 180
Query: 181 SLWRLVRVVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKD 220 SLWRLVRVVES FELSDDAIE KIE IV ELER++EE RR+KE++ Sbjct: 181 SLWRLVRVVESVFELSDDAIEGKIEAIVLELERVEEETRREKEQE 224
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
AT1G10800.1 | 6.4e-19 | 50.51 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KDR3 | 1.7e-91 | 84.44 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022330 PE=4 SV=1 | [more] |
A0A5A7TIF8 | 1.2e-89 | 80.44 | Voltage-gated hydrogen channel 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
A0A1S3CLN2 | 1.2e-89 | 80.44 | voltage-gated hydrogen channel 1 OS=Cucumis melo OX=3656 GN=LOC103502240 PE=4 SV... | [more] |
A0A6J1JZ21 | 1.1e-66 | 65.18 | voltage-gated hydrogen channel 1 OS=Cucurbita maxima OX=3661 GN=LOC111488710 PE=... | [more] |
A0A6J1D8I2 | 4.1e-66 | 66.67 | uncharacterized protein LOC111018597 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 198..225 |
None | No IPR available | PANTHER | PTHR46480:SF2 | F20B24.22 | coord: 17..218 |
IPR027359 | Voltage-dependent channel domain superfamily | GENE3D | 1.20.120.350 | | coord: 64..189 e-value: 2.8E-8 score: 35.7 |
IPR031846 | Voltage-gated hydrogen channel 1 | PANTHER | PTHR46480 | F20B24.22 | coord: 17..218 |
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:1902600 |
proton transmembrane transport |
cellular_component |
GO:0005887 |
integral component of plasma membrane |
molecular_function |
GO:0030171 |
voltage-gated proton channel activity |
|