Bhi04G001667 (gene) Wax gourd (B227) v1

Overview
NameBhi04G001667
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionvoltage-gated hydrogen channel 1
Locationchr4: 56209804 .. 56210481 (+)
RNA-Seq ExpressionBhi04G001667
SyntenyBhi04G001667
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTATTCTCTCTAACTTCTTAAACTCGACATCTCCGTTGCAATCCGCTACCACCACCACCACCACCATCGAATCCTTAGAATCGTCTATCCACGATGTTGTGAAACTCTACGAAAGACGTAAAAAATGGCGATCTCTATTCGTCGCCCCAAATACAAATAGTATCGACACATTTTCGTCATGGAGAGTCCATTTAATCACCTTACTCGAATCCACTCCCGCTCATGTCATCACCATTGTTCTCCTCGTAATGGACCTTATCATCACCGTTCTCGAACTTTCGTCGTCGTTAATATCTTGTGGATCACACGGGAAAGAAGAAGAAAAAATGTTGTACTTCCATTGGGTGAGCATTGCCATCTTGAGCTTTCTCTCCGCAAAGACGACAGCTCTGATGGTGGGGTTGGGCTGCTCGTTCTTTAGACGGTCAGGTTGCGTCGTGGATGGTGTGGTAGCGGTCGTGGCGTTGGTTTTGGAGGTGGCGGCGGAGAGGAAAGGCGGCGGAGTGATAATGATGGCAAGCTTGTGGAGGCTTGTGAGGGTGGTGGAGAGTGCTTTTGAGCTAAGTGATGATGCCATTGAAGTGAAGATTGAAGAAATAGTTTGGGAGTTAGAGAGAATGAAAGAAGAAATAAGAAGACAGAAAGAGAAGGATGAACTGATGGAGATGCTTTAA

mRNA sequence

ATGGCTATTCTCTCTAACTTCTTAAACTCGACATCTCCGTTGCAATCCGCTACCACCACCACCACCACCATCGAATCCTTAGAATCGTCTATCCACGATGTTGTGAAACTCTACGAAAGACGTAAAAAATGGCGATCTCTATTCGTCGCCCCAAATACAAATAGTATCGACACATTTTCGTCATGGAGAGTCCATTTAATCACCTTACTCGAATCCACTCCCGCTCATGTCATCACCATTGTTCTCCTCGTAATGGACCTTATCATCACCGTTCTCGAACTTTCGTCGTCGTTAATATCTTGTGGATCACACGGGAAAGAAGAAGAAAAAATGTTGTACTTCCATTGGGTGAGCATTGCCATCTTGAGCTTTCTCTCCGCAAAGACGACAGCTCTGATGGTGGGGTTGGGCTGCTCGTTCTTTAGACGGTCAGGTTGCGTCGTGGATGGTGTGGTAGCGGTCGTGGCGTTGGTTTTGGAGGTGGCGGCGGAGAGGAAAGGCGGCGGAGTGATAATGATGGCAAGCTTGTGGAGGCTTGTGAGGGTGGTGGAGAGTGCTTTTGAGCTAAGTGATGATGCCATTGAAGTGAAGATTGAAGAAATAGTTTGGGAGTTAGAGAGAATGAAAGAAGAAATAAGAAGACAGAAAGAGAAGGATGAACTGATGGAGATGCTTTAA

Coding sequence (CDS)

ATGGCTATTCTCTCTAACTTCTTAAACTCGACATCTCCGTTGCAATCCGCTACCACCACCACCACCACCATCGAATCCTTAGAATCGTCTATCCACGATGTTGTGAAACTCTACGAAAGACGTAAAAAATGGCGATCTCTATTCGTCGCCCCAAATACAAATAGTATCGACACATTTTCGTCATGGAGAGTCCATTTAATCACCTTACTCGAATCCACTCCCGCTCATGTCATCACCATTGTTCTCCTCGTAATGGACCTTATCATCACCGTTCTCGAACTTTCGTCGTCGTTAATATCTTGTGGATCACACGGGAAAGAAGAAGAAAAAATGTTGTACTTCCATTGGGTGAGCATTGCCATCTTGAGCTTTCTCTCCGCAAAGACGACAGCTCTGATGGTGGGGTTGGGCTGCTCGTTCTTTAGACGGTCAGGTTGCGTCGTGGATGGTGTGGTAGCGGTCGTGGCGTTGGTTTTGGAGGTGGCGGCGGAGAGGAAAGGCGGCGGAGTGATAATGATGGCAAGCTTGTGGAGGCTTGTGAGGGTGGTGGAGAGTGCTTTTGAGCTAAGTGATGATGCCATTGAAGTGAAGATTGAAGAAATAGTTTGGGAGTTAGAGAGAATGAAAGAAGAAATAAGAAGACAGAAAGAGAAGGATGAACTGATGGAGATGCTTTAA

Protein sequence

MAILSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAPNTNSIDTFSSWRVHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISCGSHGKEEEKMLYFHWVSIAILSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLVRVVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKDELMEML
Homology
BLAST of Bhi04G001667 vs. TAIR 10
Match: AT1G10800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 92.0 bits (227), Expect = 6.4e-19
Identity = 50/99 (50.51%), Postives = 77/99 (77.78%), Query Frame = 0

Query: 131 ALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLVRVVESAFELS 190
           AL+V +G SFF++ GCV+DG +A+VAL+L+V  E+KG G I++ SLWR++RVVE+AFELS
Sbjct: 2   ALVVAMGKSFFKQPGCVMDGTLAIVALILQVLLEKKGTGFIVVVSLWRVLRVVETAFELS 61

Query: 191 DDAIEVKIEEIVWELERMKEE----IRRQKEKDELMEML 226
           D+AIEV+I+ I+ + + + +E    +    EKDE+++ML
Sbjct: 62  DEAIEVQIDGIISQFQALSKENRTLLETLAEKDEVIKML 100

BLAST of Bhi04G001667 vs. ExPASy TrEMBL
Match: A0A0A0KDR3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022330 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.7e-91
Identity = 190/225 (84.44%), Postives = 205/225 (91.11%), Query Frame = 0

Query: 1   MAILSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAPNTNSIDTFS 60
           MAILSNFLNS+SPLQS  TT TTIESLESSIHDVVKLYERR+KWR+LF +P  N+ D FS
Sbjct: 1   MAILSNFLNSSSPLQS-VTTATTIESLESSIHDVVKLYERRRKWRALFFSPIPNNFDAFS 60

Query: 61  SWRVHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISCGSHGKEEEKMLYFHWVSIA 120
           SWRVHLIT LESTPAH+ITI LLVMDLIITVLELSSSLISCGSHGK+EEK  YFHWVSI+
Sbjct: 61  SWRVHLITFLESTPAHIITIFLLVMDLIITVLELSSSLISCGSHGKDEEKASYFHWVSIS 120

Query: 121 ILSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLV 180
           ILSFLSAKT ALM+GLG SFFRR GCVVDGVVA+VALVLEV AERKGGGVIM+ASLWRLV
Sbjct: 121 ILSFLSAKTAALMLGLGRSFFRRPGCVVDGVVAIVALVLEVVAERKGGGVIMVASLWRLV 180

Query: 181 RVVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKDELMEML 226
           RVVESAFE+SDD IEVKIE IVWELE+MKEEIRR+KEKD + EML
Sbjct: 181 RVVESAFEISDDTIEVKIEGIVWELEKMKEEIRREKEKDTI-EML 223

BLAST of Bhi04G001667 vs. ExPASy TrEMBL
Match: A0A5A7TIF8 (Voltage-gated hydrogen channel 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold592G00070 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89
Identity = 181/225 (80.44%), Postives = 203/225 (90.22%), Query Frame = 0

Query: 1   MAILSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAPNTNSIDTFS 60
           MAILSNFLNS+S LQS  TT TTIESLE SIHD+ KLYERR+KWR+LF +P  N+ DTFS
Sbjct: 1   MAILSNFLNSSSTLQS-VTTATTIESLELSIHDIAKLYERRRKWRALFFSPIPNNFDTFS 60

Query: 61  SWRVHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISCGSHGKEEEKMLYFHWVSIA 120
           SWRVHLIT LESTPAH+IT+ LLVMDLIIT+LELSSSLISCGSHGK+EEK  YFHWVSI+
Sbjct: 61  SWRVHLITFLESTPAHIITVFLLVMDLIITLLELSSSLISCGSHGKDEEKASYFHWVSIS 120

Query: 121 ILSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLV 180
           IL+FLSAK+ A+M+GLG SFFRR GCVVDGVVA+VAL+LE  AERKGGGVIM+ASLWRLV
Sbjct: 121 ILTFLSAKSAAVMLGLGLSFFRRPGCVVDGVVAIVALILEAVAERKGGGVIMVASLWRLV 180

Query: 181 RVVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKDELMEML 226
           RVVESAFE+SDD IEVKIE IVWELERMKEEIRR+KEKD++ EML
Sbjct: 181 RVVESAFEISDDVIEVKIEGIVWELERMKEEIRREKEKDKITEML 224

BLAST of Bhi04G001667 vs. ExPASy TrEMBL
Match: A0A1S3CLN2 (voltage-gated hydrogen channel 1 OS=Cucumis melo OX=3656 GN=LOC103502240 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89
Identity = 181/225 (80.44%), Postives = 203/225 (90.22%), Query Frame = 0

Query: 1   MAILSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAPNTNSIDTFS 60
           MAILSNFLNS+S LQS  TT TTIESLE SIHD+ KLYERR+KWR+LF +P  N+ DTFS
Sbjct: 1   MAILSNFLNSSSTLQS-VTTATTIESLELSIHDIAKLYERRRKWRALFFSPIPNNFDTFS 60

Query: 61  SWRVHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISCGSHGKEEEKMLYFHWVSIA 120
           SWRVHLIT LESTPAH+IT+ LLVMDLIIT+LELSSSLISCGSHGK+EEK  YFHWVSI+
Sbjct: 61  SWRVHLITFLESTPAHIITVFLLVMDLIITLLELSSSLISCGSHGKDEEKASYFHWVSIS 120

Query: 121 ILSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLV 180
           IL+FLSAK+ A+M+GLG SFFRR GCVVDGVVA+VAL+LE  AERKGGGVIM+ASLWRLV
Sbjct: 121 ILTFLSAKSAAVMLGLGLSFFRRPGCVVDGVVAIVALILEAVAERKGGGVIMVASLWRLV 180

Query: 181 RVVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKDELMEML 226
           RVVESAFE+SDD IEVKIE IVWELERMKEEIRR+KEKD++ EML
Sbjct: 181 RVVESAFEISDDVIEVKIEGIVWELERMKEEIRREKEKDKITEML 224

BLAST of Bhi04G001667 vs. ExPASy TrEMBL
Match: A0A6J1JZ21 (voltage-gated hydrogen channel 1 OS=Cucurbita maxima OX=3661 GN=LOC111488710 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.1e-66
Identity = 146/224 (65.18%), Postives = 180/224 (80.36%), Query Frame = 0

Query: 4   LSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAPNTNSIDTFSSWR 63
           +++  +S +P +       +I++LE SI +V+KL +RR KW +LF  P  N+ +  SSWR
Sbjct: 1   MADLSSSPTPPEPPAAAAASIQALELSIQNVMKLNQRRIKWHTLFATPIPNTSNPLSSWR 60

Query: 64  VHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISCGS--HGKEEEKMLYFHWVSIAI 123
            HLIT LESTP+H+ITIVLL+MDLI+TVLELSSSLISC S    K EE+++ FHWVSIAI
Sbjct: 61  SHLITFLESTPSHLITIVLLLMDLIVTVLELSSSLISCNSPVSHKREEEVMGFHWVSIAI 120

Query: 124 LSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMASLWRLVR 183
           LS LS KT AL+VGLG SFFR+ GCVVDGVV  VAL LEVAA+R+GGGVIM+ SLWR+VR
Sbjct: 121 LSLLSTKTVALVVGLGLSFFRQPGCVVDGVVVAVALGLEVAAKRRGGGVIMVGSLWRIVR 180

Query: 184 VVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKDELMEML 226
           VVESAFELSDDAIE KIE IVWELE MKEEIRR+KEKDE+++++
Sbjct: 181 VVESAFELSDDAIEAKIEGIVWELEGMKEEIRREKEKDEVIDLV 224

BLAST of Bhi04G001667 vs. ExPASy TrEMBL
Match: A0A6J1D8I2 (uncharacterized protein LOC111018597 OS=Momordica charantia OX=3673 GN=LOC111018597 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 4.1e-66
Identity = 150/225 (66.67%), Postives = 181/225 (80.44%), Query Frame = 0

Query: 1   MAILSNFLNSTSPLQSATTTTTTIESLESSIHDVVKLYERRKKWRSLFVAP---NTNSID 60
           MA LSNF++ +SP Q A T + ++ESLE SI DV+KL E+R++WR+LF AP   N N +D
Sbjct: 1   MANLSNFVHRSSPPQPA-TGSPSLESLEFSIQDVIKLSEKRRRWRTLFAAPIQTNRNRLD 60

Query: 61  TFSSWRVHLITLLESTPAHVITIVLLVMDLIITVLELSSSLISC---GSHGKEEEKMLYF 120
           T + W+  L+  LESTPAHV+TI+LL+MDL ITVLELSSSLISC    +H K  +++LYF
Sbjct: 61  TSAPWQTQLVAFLESTPAHVVTIILLLMDLTITVLELSSSLISCSLSANHKKGAKEVLYF 120

Query: 121 HWVSIAILSFLSAKTTALMVGLGCSFFRRSGCVVDGVVAVVALVLEVAAERKGGGVIMMA 180
           HWV IAILS LSAKT AL VGLG  F R+ GC+VDGVVAVVALVLEV AERKGGGVI++A
Sbjct: 121 HWVGIAILSLLSAKTVALAVGLGGLFLRQPGCIVDGVVAVVALVLEVVAERKGGGVIIVA 180

Query: 181 SLWRLVRVVESAFELSDDAIEVKIEEIVWELERMKEEIRRQKEKD 220
           SLWRLVRVVES FELSDDAIE KIE IV ELER++EE RR+KE++
Sbjct: 181 SLWRLVRVVESVFELSDDAIEGKIEAIVLELERVEEETRREKEQE 224

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G10800.16.4e-1950.51unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KDR31.7e-9184.44Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G022330 PE=4 SV=1[more]
A0A5A7TIF81.2e-8980.44Voltage-gated hydrogen channel 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3CLN21.2e-8980.44voltage-gated hydrogen channel 1 OS=Cucumis melo OX=3656 GN=LOC103502240 PE=4 SV... [more]
A0A6J1JZ211.1e-6665.18voltage-gated hydrogen channel 1 OS=Cucurbita maxima OX=3661 GN=LOC111488710 PE=... [more]
A0A6J1D8I24.1e-6666.67uncharacterized protein LOC111018597 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 198..225
NoneNo IPR availablePANTHERPTHR46480:SF2F20B24.22coord: 17..218
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 64..189
e-value: 2.8E-8
score: 35.7
IPR031846Voltage-gated hydrogen channel 1PANTHERPTHR46480F20B24.22coord: 17..218

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001667Bhi04M001667mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0005887 integral component of plasma membrane
molecular_function GO:0030171 voltage-gated proton channel activity