Bhi04G001582 (gene) Wax gourd (B227) v1

Overview
NameBhi04G001582
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionRegulatory particle non-ATPase 10
Locationchr4: 51136603 .. 51136991 (-)
RNA-Seq ExpressionBhi04G001582
SyntenyBhi04G001582
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAGATCGATAACTGAACGATACCGACGACCTGATCTTGATTCAAAATGGCATCATTGTATGGAGAGATTGGAACGATGTTACGGACAAGAAAGAGAGACTAGATATAAGATCGTTGTGGCCTTGCGAGGTAGGTAGGTTCACGGTACGGAGAGTGATCTGCTGGTTTGGTAGACGGCGTAGACGTCGAGGCAGTCTTAATAGACTCCGGTCTTGTCATTAAGGTTCCGAGAGGAGACAGTGACTTGGTTACTAGAGAAGATACAGTTAGCGGCGGTGACATTGAAGAGGAAGACGGTGGCATGGATGATAAATTTGGGTTTTGTAGGTTGAAGAACATACCAAATTGGGAGGATCGTGAGGAGGATAAGGAAGAGGAAAATTAG

mRNA sequence

ATGTTGAGATCGATAACTGAACGATACCGACGACCTGATCTTGATTCAAAATGGCATCATTGTATGGAGAGATTGGAACGATGTTACGGACAAGAAAGAGAGACTAGATATAAGATCGTTGTGGCCTTGCGAGACGGCGTAGACGTCGAGGCAGTCTTAATAGACTCCGGTCTTGTCATTAAGGTTCCGAGAGGAGACAGTGACTTGGTTACTAGAGAAGATACAGTTAGCGGCGGTGACATTGAAGAGGAAGACGGTGGCATGGATGATAAATTTGGGTTTTGTAGGTTGAAGAACATACCAAATTGGGAGGATCGTGAGGAGGATAAGGAAGAGGAAAATTAG

Coding sequence (CDS)

ATGTTGAGATCGATAACTGAACGATACCGACGACCTGATCTTGATTCAAAATGGCATCATTGTATGGAGAGATTGGAACGATGTTACGGACAAGAAAGAGAGACTAGATATAAGATCGTTGTGGCCTTGCGAGACGGCGTAGACGTCGAGGCAGTCTTAATAGACTCCGGTCTTGTCATTAAGGTTCCGAGAGGAGACAGTGACTTGGTTACTAGAGAAGATACAGTTAGCGGCGGTGACATTGAAGAGGAAGACGGTGGCATGGATGATAAATTTGGGTTTTGTAGGTTGAAGAACATACCAAATTGGGAGGATCGTGAGGAGGATAAGGAAGAGGAAAATTAG

Protein sequence

MLRSITERYRRPDLDSKWHHCMERLERCYGQERETRYKIVVALRDGVDVEAVLIDSGLVIKVPRGDSDLVTREDTVSGGDIEEEDGGMDDKFGFCRLKNIPNWEDREEDKEEEN
Homology
[Close]
BLAST of Bhi04G001582 vs. ExPASy TrEMBL
Match: A0A5D3BXB8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21333G00010 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 7.8e-13
Identity = 47/71 (66.20%), Postives = 54/71 (76.06%), Query Frame = 0 

Query: 45  DGVDVEAVLIDSGLVIKVPRGDSDLVTREDTVSGGDIEEEDGG-MDDKFGFCRLKNIPNW 104
           +GVDVEAV+IDS LV+ V   D DL T  D VS GDIEE DGG +DD+FG CRLKN PN 
Sbjct: 77  NGVDVEAVVIDSDLVVGVAGRDGDLDTGGDEVSSGDIEEVDGGVLDDEFGLCRLKNGPNK 136

Query: 105 EDREEDKEEEN 115
           ED EED+EE+N
Sbjct: 137 EDCEEDEEEKN 147

[Close]
BLAST of Bhi04G001582 vs. ExPASy TrEMBL
Match: A0A0A0KKM0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454480 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.3e-12
Identity = 46/76 (60.53%), Postives = 58/76 (76.32%), Query Frame = 0 

Query: 40  VVALRDGVDVEAVLIDSGLVIKVPRGDSDLVTREDTVSGGDIEEEDGG-MDDKFGFCRLK 99
           ++ + +GVDVEAV+IDS LV++V   D DL T  D VSGG+IEE DGG +DD+FG C LK
Sbjct: 72  LLVMVNGVDVEAVVIDSDLVVRVTGIDGDLDTGGDEVSGGEIEEVDGGVLDDEFGLCGLK 131

Query: 100 NIPNWEDREEDKEEEN 115
           N PN ED EED+EE+N
Sbjct: 132 NGPNKEDCEEDEEEKN 147

[Close]
BLAST of Bhi04G001582 vs. ExPASy TrEMBL
Match: A0A5A7QLV4 (Regulatory particle non-ATPase 10 OS=Striga asiatica OX=4170 GN=STAS_22889 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.6e-05
Identity = 35/77 (45.45%), Postives = 53/77 (68.83%), Query Frame = 0 

Query: 39  IVVALRDGVDVEAVLIDSGLVIKVPRGDSDLVTREDTVSGGDIEEEDGG-MDDKFGFCRL 98
           +VV +R   D EAV++D    ++V RGD DL    D V GGD+E+EDGG ++D+ GF  L
Sbjct: 142 LVVVVR--ADGEAVVVDPDAGVRVVRGDGDLECGGDDVRGGDVEDEDGGVLEDESGFSGL 201

Query: 99  KNIPNWEDREEDKEEEN 115
           ++ P+ ED +E++EEE+
Sbjct: 202 EDGPHDEDDKEEQEEED 216

[Close]
BLAST of Bhi04G001582 vs. ExPASy TrEMBL
Match: A0A5J4ZLG7 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_015942 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.0e-05
Identity = 32/69 (46.38%), Postives = 47/69 (68.12%), Query Frame = 0 

Query: 47  VDVEAVLIDSGLVIKVPRGDSDLVTREDTVSGGDIEEEDGG-MDDKFGFCRLKNIPNWED 106
           VDVE V++D+ LV++VPR D DL    + + GGD+E EDGG + D+  F  L++ P+ ED
Sbjct: 562 VDVEFVVVDADLVVRVPRVDGDLDVGGEIIGGGDVEGEDGGVLKDEAWFPGLEDGPDDED 621

Query: 107 REEDKEEEN 115
            EE+ E +N
Sbjct: 622 EEEEDEVDN 630

The following BLAST results are available for this feature:
BLAST of Bhi04G001582 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G001582 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G001582 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BXB87.8e-1366.20Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KKM01.3e-1260.53Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454480 PE=4 SV=1[more]
A0A5A7QLV41.6e-0545.45Regulatory particle non-ATPase 10 OS=Striga asiatica OX=4170 GN=STAS_22889 PE=4 ... [more]
A0A5J4ZLG76.0e-0546.38Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_015942 PE=4 SV=1[more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001582Bhi04M001582mRNA