Bhi04G001253 (gene) Wax gourd (B227) v1

Overview
NameBhi04G001253
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr4: 39980824 .. 39981255 (+)
RNA-Seq ExpressionBhi04G001253
SyntenyBhi04G001253
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGCCACAGCCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGCCGTCGGTGGAATGCTTGCTTGGATTATGGTTACGAGTTTGAGGATCCTGTCATAGAGCTGAACCAAGAAGCAACGGTCATGACTACGCAACGAGTGAATGCCTGTGTTGTGAATGCCACCGAGTCGGAGAATGTCAATGATGAGATGTTCTTCAGCAGAGAGCAACAAGCTGCTATATGGCAGAAGAATATACTCATGGGGGGGAAATGCCAGCTACCAGATTTCTCGGGTGTCATATTATACGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTCCTTTACTCACCTGGAAGTGA

mRNA sequence

ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGCCACAGCCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGCCGTCGGTGGAATGCTTGCTTGGATTATGGTTACGAGTTTGAGGATCCTGTCATAGAGCTGAACCAAGAAGCAACGGTCATGACTACGCAACGAGTGAATGCCTGTGTTGTGAATGCCACCGAGTCGGAGAATGTCAATGATGAGATGTTCTTCAGCAGAGAGCAACAAGCTGCTATATGGCAGAAGAATATACTCATGGGGGGGAAATGCCAGCTACCAGATTTCTCGGGTGTCATATTATACGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTCCTTTACTCACCTGGAAGTGA

Coding sequence (CDS)

ATGGCAAGGCAACTGCAAATGATGCATCCTTCACAAGCCACAGCCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTGTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGCCGTCGGTGGAATGCTTGCTTGGATTATGGTTACGAGTTTGAGGATCCTGTCATAGAGCTGAACCAAGAAGCAACGGTCATGACTACGCAACGAGTGAATGCCTGTGTTGTGAATGCCACCGAGTCGGAGAATGTCAATGATGAGATGTTCTTCAGCAGAGAGCAACAAGCTGCTATATGGCAGAAGAATATACTCATGGGGGGGAAATGCCAGCTACCAGATTTCTCGGGTGTCATATTATACGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTCCTTTACTCACCTGGAAGTGA

Protein sequence

MARQLQMMHPSQATAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVMTTQRVNACVVNATESENVNDEMFFSREQQAAIWQKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRPLLTWK
Homology
BLAST of Bhi04G001253 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21
Identity = 58/135 (42.96%), Postives = 73/135 (54.07%), Query Frame = 0

Query: 10  PSQATAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVM 69
           P   T  + +  + L   +  L   ASH+++  RRW AC  YG    +PVI L  + T+M
Sbjct: 6   PPSRTKPLTIFKMGLASASVRLVNLASHSKRKLRRWAAC--YGSRDYEPVIYLQNDMTMM 65

Query: 70  TTQRVNACVVNATESENVNDEMFFSREQ-QAAIWQKNILMGGKCQLPDFSGVILYDPNGN 129
                           N +  M  S +Q +  +WQKNILMGGKCQLPDFSGVILYD +G 
Sbjct: 66  NN--------GGVYEYNGDPSMLLSGDQRRGPLWQKNILMGGKCQLPDFSGVILYDADGQ 125

Query: 130 AVTPAKTPRPLLTWK 144
            V PAK   PLLTWK
Sbjct: 126 VVPPAKNSLPLLTWK 130

BLAST of Bhi04G001253 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 4.2e-08
Identity = 25/55 (45.45%), Postives = 36/55 (65.45%), Query Frame = 0

Query: 85  ENVNDEMFFSREQQAAIWQKNILMGGKCQLPDFSGVILYDPNGNAV--TPAKTPR 138
           +N  +E   + E++  +WQ+ ILMGGKC+  DFSGVI YD NG  +   P ++PR
Sbjct: 91  KNPPEEKATAMEEEHGLWQREILMGGKCEPLDFSGVIYYDSNGRLLNEVPPRSPR 145

BLAST of Bhi04G001253 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.2 bits (121), Expect = 7.9e-07
Identity = 22/47 (46.81%), Postives = 33/47 (70.21%), Query Frame = 0

Query: 96  EQQAAIWQKNILMGGKCQLPDFSGVILYDPNGNAV--TPAKTPRPLL 141
           E++  +WQ+ ILMGGKC+  D+SGVI YD +G+ +   P ++PR  L
Sbjct: 128 EEEYGVWQREILMGGKCEPLDYSGVIYYDCSGHQLKQVPPRSPRASL 174

BLAST of Bhi04G001253 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 4.3e-05
Identity = 18/28 (64.29%), Postives = 23/28 (82.14%), Query Frame = 0

Query: 101 IWQKNILMGGKCQLPDFSGVILYDPNGN 129
           +WQ+ ILMG KC+LP FSG+ILYD  G+
Sbjct: 116 VWQRPILMGEKCELPRFSGLILYDECGH 143

BLAST of Bhi04G001253 vs. ExPASy TrEMBL
Match: A0A6J1JR28 (uncharacterized protein LOC111487577 OS=Cucurbita maxima OX=3661 GN=LOC111487577 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.4e-67
Identity = 128/144 (88.89%), Postives = 133/144 (92.36%), Query Frame = 0

Query: 1   MARQLQ-MMHPSQATAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQ MMH SQATAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV
Sbjct: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVMTTQRVNACVVNATESENVNDEMFFSREQQAAIWQKNILMGGKCQLPDFSG 120
           IELNQEATV+TTQRVN CVVNATE EN NDEMFFSREQ+A +W+KNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRATVWEKNILMGGKCQLPDFSG 120

Query: 121 VILYDPNGNAVTPAKTPRPLLTWK 144
           VILYD NGN VTPA+T  PLLTWK
Sbjct: 121 VILYDSNGNVVTPARTQFPLLTWK 144

BLAST of Bhi04G001253 vs. ExPASy TrEMBL
Match: A0A6J1H530 (uncharacterized protein LOC111460648 OS=Cucurbita moschata OX=3662 GN=LOC111460648 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66
Identity = 127/144 (88.19%), Postives = 132/144 (91.67%), Query Frame = 0

Query: 1   MARQLQ-MMHPSQATAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQ MMH SQATAQVGMAG SLLLCAFALFMCASHARKWR RWNACLDYGYEFEDPV
Sbjct: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRHRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVMTTQRVNACVVNATESENVNDEMFFSREQQAAIWQKNILMGGKCQLPDFSG 120
           IELNQEATV+TTQRVN CVVNA E EN NDEMFFSREQ+AA+W+KNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTQRVNTCVVNAPEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120

Query: 121 VILYDPNGNAVTPAKTPRPLLTWK 144
           VILYD NGN VTPA+T  PLLTWK
Sbjct: 121 VILYDSNGNVVTPARTQLPLLTWK 144

BLAST of Bhi04G001253 vs. ExPASy TrEMBL
Match: A0A0A0K8P1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052800 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.5e-66
Identity = 127/143 (88.81%), Postives = 132/143 (92.31%), Query Frame = 0

Query: 1   MARQLQMMHPSQATAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60
           MARQLQ++H SQ TAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI
Sbjct: 1   MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60

Query: 61  ELNQEATVMTTQRVNACVVNATESENVNDEMFFSREQQAAIWQKNILMGGKCQLPDFSGV 120
           ELNQEATV+TTQR     VN TE EN NDEMFFSREQQA++W KNILMGGKCQLPDFSGV
Sbjct: 61  ELNQEATVVTTQR-----VNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGV 120

Query: 121 ILYDPNGNAVTPAKTPRPLLTWK 144
           ILYDPNGNAVTPAKTPRPLLTWK
Sbjct: 121 ILYDPNGNAVTPAKTPRPLLTWK 138

BLAST of Bhi04G001253 vs. ExPASy TrEMBL
Match: A0A5A7SQ79 (Putative Nucleolar protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00920 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 124/143 (86.71%), Postives = 130/143 (90.91%), Query Frame = 0

Query: 1   MARQLQMMHPSQATAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60
           MARQLQ++H SQ T QVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI
Sbjct: 1   MARQLQIIHSSQGTTQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60

Query: 61  ELNQEATVMTTQRVNACVVNATESENVNDEMFFSREQQAAIWQKNILMGGKCQLPDFSGV 120
           ELNQEATV+TT +     VNATE EN N+EMFFSREQQA+IW KNILMGGKCQLPDFSGV
Sbjct: 61  ELNQEATVVTTGQ-----VNATEPENDNNEMFFSREQQASIWHKNILMGGKCQLPDFSGV 120

Query: 121 ILYDPNGNAVTPAKTPRPLLTWK 144
           ILYDPNGN VTPAKTPRPLLTWK
Sbjct: 121 ILYDPNGNVVTPAKTPRPLLTWK 138

BLAST of Bhi04G001253 vs. ExPASy TrEMBL
Match: A0A1S3C3W7 (uncharacterized protein LOC103496580 OS=Cucumis melo OX=3656 GN=LOC103496580 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.4e-64
Identity = 124/143 (86.71%), Postives = 130/143 (90.91%), Query Frame = 0

Query: 1   MARQLQMMHPSQATAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60
           MARQLQ++H SQ T QVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI
Sbjct: 1   MARQLQIIHSSQGTTQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60

Query: 61  ELNQEATVMTTQRVNACVVNATESENVNDEMFFSREQQAAIWQKNILMGGKCQLPDFSGV 120
           ELNQEATV+TT +     VNATE EN N+EMFFSREQQA+IW KNILMGGKCQLPDFSGV
Sbjct: 61  ELNQEATVVTTGQ-----VNATEPENDNNEMFFSREQQASIWHKNILMGGKCQLPDFSGV 120

Query: 121 ILYDPNGNAVTPAKTPRPLLTWK 144
           ILYDPNGN VTPAKTPRPLLTWK
Sbjct: 121 ILYDPNGNVVTPAKTPRPLLTWK 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G71740.11.1e-2142.96unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bac... [more]
AT1G49000.14.2e-0845.45unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G18560.17.9e-0746.81unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G14760.14.3e-0564.29unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1JR282.4e-6788.89uncharacterized protein LOC111487577 OS=Cucurbita maxima OX=3661 GN=LOC111487577... [more]
A0A6J1H5301.2e-6688.19uncharacterized protein LOC111460648 OS=Cucurbita moschata OX=3662 GN=LOC1114606... [more]
A0A0A0K8P11.5e-6688.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052800 PE=4 SV=1[more]
A0A5A7SQ791.4e-6486.71Putative Nucleolar protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1S3C3W71.4e-6486.71uncharacterized protein LOC103496580 OS=Cucumis melo OX=3656 GN=LOC103496580 PE=... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33237:SF4F14O23.12coord: 1..143
NoneNo IPR availablePANTHERPTHR33237F2P16.13 PROTEIN-RELATEDcoord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001253Bhi04M001253mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane