Bhi04G001155 (gene) Wax gourd (B227) v1

Overview
NameBhi04G001155
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Description60S ribosomal protein L17
Locationchr4: 36502393 .. 36504550 (-)
RNA-Seq ExpressionBhi04G001155
SyntenyBhi04G001155
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGAAATAGGGTTGGTCTTCAGTCCACTTTTGACTTTTTTAGGGTTTTGTAGAGTTTGTCCCCTCTCTTCTTATAAACCTAATTCAAGCATTTCCCTTCCTCTGTTCACGGCCAAATCCAACCCTTTTCTTCACAGACCCAAGTTGCAGCCGTCGCCATGGTTCGTCTTCTCCTCTCTTCTCGATCTTCCCTTCCAAACGATTTCATCTCAGTTTTAAGCTAGCTTCTAATCTTCTTTTCCTGTTCTTGTTCATTGTTGCAGGTGAAGTATTCCAGGGAACCAGACAATCCCACCAAGTGTATTTTTCTTTTTCTACACTCTCTCCTTACGGATCCTGTTTGATTTCTACTCAAAGCTTTGCATTTGATTTGATCTGTTTATTGCCTACCCTTTTGAATTTTCTGACACTCAGTTTTGTTCTTCTTTTCAGCCTGCAAAGCCCGTGGCTCGGACCTCAGAGTCCACTTCAAGGTAGGTTTTATTCCACTTCGTTGCTCTGCAATCCTTCGGAATAACAATCAACTAGAACTACTATGGACTAGGGCTTGTACCAGTAGTATTCGAAGTTTGTTTTTTTTTTACAATCCAAAATTTCTCTTCAGGAGTGATAGTTGTGCTTGATGCACGTAATTACCTGTTTGCTTTGATGTGCTCCTTTGTCTTATTGAATGTCTGTTGAATATTTGCTTGATGCAATCCCATATTCTCTCTTCGGTGCAAGTAATTGATTGATTTAAGCAAGAGTATATTAGAGTTTCCGTTAATGATGTTATATCAAAAGGCTCGTCTCTCAAAACAATTGCAGTTGCCGTTATTTTGAATTTCCCAGGATTTAGATCTAATGCTGGTCTTTATCTTTTTAGCTACACATTAATTATACGTATAAGTGAGTTTCTTCCGTGAACAATTTATACTTCTGTGTAACCTGATGATAAAAGCAGGGCTCTGTTGCCTTCTGTGAACAGGGCTCTCGTAAACTTCAGGGAAATTATATGCATTGTTATTGGGTGAACCTCTGTAACCAATAATGTCTTGAAGGTTCAGTAAATAATGCTACATATTTAAGCCTGTATTTCGAATATATTTTAGTACCATGTGTTGTTGCTAAGGCTCACCATAACTTGAAGGTTTTTCATATTATAGAACACAAGGGAAACTGCACATGCTATCAGGAAGTTGCCACTGGCCAAGGCCAAGAGGTACCTAGAGGATGTCCTTGCCCACAAACAGGCCATTCCTTTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGAACAGGCATTCCAATGGCCAAGGACGCTGGCCTGTCAAATCTGCAAAGTTTATCCTAGATTTGCTTAAGAATGCTGAGAGCAATGCTGAAGTATGTGTTGCCTTTTCTGTCCCAACTCACTCCGAATTGTTGTTTTTGGTTTTTCCCGCCAGCTCATAATTATTTCTGCTCTTTTAGGTTAAGGGTCTAGATGTTGATTTGCTCCACGTATCTCACATCCAAGTAAACCAAGCTCAGAAACAAAGGCGTCGAACCTACCGTGCTCACGGACGAATCAACCGTATGTTCTGGCCACAAATTTACCTGTATTTATATGGTTGTCCAATCTTGAACTTATTGCCTGACCTTCAATTCCGTATTCTTTTCTGTCTGGTTGGCAGCTTACATGTCTTCTCCTTGCCACATTGAGCTGATTTTGTCCGAGAAAGAAGAGCCTGTTAAGAAGGAGGTAATATATCAGACTGCCTAATTATGCTTGTTCAGTTAAGAATGGATTGCTTTTAATGTATTTCTTATTTTTCCATAATTCATGATATCACAGCCCGAAACTCAGCTGGCGACTGGCAAACCTAAGAAAGGTCAAGCTATCCGTAGTGGCGCTTCCTCTTGAATGGCAAAAGTATAAATTCAGTTGTGGGTTTTTGCTGTGCCATTTCTTTTTTGAAGTGAGTTTAATTATTGATCACTATATAGAACGAGGGATTATTATTTAGATGTTTTGTGTGACCATGTTATATTTGGAACCTTTTCTAGTTCAATTTTCTTTTAAGTTGCAATCACATTCTGGCATTTTCTTTTTCTTAATGATATTTTGACCTCTTGGCATAGTTGTGATGATCACCATTAATTTCATTCTGCTAAATTAACACAGAA

mRNA sequence

CAGAAATAGGGTTGGTCTTCAGTCCACTTTTGACTTTTTTAGGGTTTTGTAGAGTTTGTCCCCTCTCTTCTTATAAACCTAATTCAAGCATTTCCCTTCCTCTGTTCACGGCCAAATCCAACCCTTTTCTTCACAGACCCAAGTTGCAGCCGTCGCCATGGTGAAGTATTCCAGGGAACCAGACAATCCCACCAAGTCCTGCAAAGCCCGTGGCTCGGACCTCAGAGTCCACTTCAAGAACACAAGGGAAACTGCACATGCTATCAGGAAGTTGCCACTGGCCAAGGCCAAGAGGTACCTAGAGGATGTCCTTGCCCACAAACAGGCCATTCCTTTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGAACAGGCATTCCAATGGCCAAGGACGCTGGCCTGTCAAATCTGCAAAGTTTATCCTAGATTTGCTTAAGAATGCTGAGAGCAATGCTGAAGTTAAGGGTCTAGATGTTGATTTGCTCCACGTATCTCACATCCAAGTAAACCAAGCTCAGAAACAAAGGCGTCGAACCTACCGTGCTCACGGACGAATCAACCCTTACATGTCTTCTCCTTGCCACATTGAGCTGATTTTGTCCGAGAAAGAAGAGCCTGTTAAGAAGGAGCCCGAAACTCAGCTGGCGACTGGCAAACCTAAGAAAGGTCAAGCTATCCGTAGTGGCGCTTCCTCTTGAATGGCAAAAGTATAAATTCAGTTGTGGGTTTTTGCTGTGCCATTTCTTTTTTGAAGTGAGTTTAATTATTGATCACTATATAGAACGAGGGATTATTATTTAGATGTTTTGTGTGACCATGTTATATTTGGAACCTTTTCTAGTTCAATTTTCTTTTAAGTTGCAATCACATTCTGGCATTTTCTTTTTCTTAATGATATTTTGACCTCTTGGCATAGTTGTGATGATCACCATTAATTTCATTCTGCTAAATTAACACAGAA

Coding sequence (CDS)

ATGGTGAAGTATTCCAGGGAACCAGACAATCCCACCAAGTCCTGCAAAGCCCGTGGCTCGGACCTCAGAGTCCACTTCAAGAACACAAGGGAAACTGCACATGCTATCAGGAAGTTGCCACTGGCCAAGGCCAAGAGGTACCTAGAGGATGTCCTTGCCCACAAACAGGCCATTCCTTTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGAACAGGCATTCCAATGGCCAAGGACGCTGGCCTGTCAAATCTGCAAAGTTTATCCTAGATTTGCTTAAGAATGCTGAGAGCAATGCTGAAGTTAAGGGTCTAGATGTTGATTTGCTCCACGTATCTCACATCCAAGTAAACCAAGCTCAGAAACAAAGGCGTCGAACCTACCGTGCTCACGGACGAATCAACCCTTACATGTCTTCTCCTTGCCACATTGAGCTGATTTTGTCCGAGAAAGAAGAGCCTGTTAAGAAGGAGCCCGAAACTCAGCTGGCGACTGGCAAACCTAAGAAAGGTCAAGCTATCCGTAGTGGCGCTTCCTCTTGA

Protein sequence

MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSGASS
Homology
[Close]
BLAST of Bhi04G001155 vs. TAIR 10
Match: AT1G67430.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 312.8 bits (800), Expect = 1.9e-85
Identity = 157/176 (89.20%), Postives = 163/176 (92.61%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA 177
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA  K KK  A
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKSAA 175

[Close]
BLAST of Bhi04G001155 vs. TAIR 10
Match: AT1G27400.1 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 312.0 bits (798), Expect = 3.2e-85
Identity = 156/174 (89.66%), Postives = 163/174 (93.68%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYS+EPDN TKSCKARG+DLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKG 175
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA  K KKG
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKG 173

[Close]
BLAST of Bhi04G001155 vs. TAIR 10
Match: AT1G67430.2 (Ribosomal protein L22p/L17e family protein )

HSP 1 Score: 211.5 bits (537), Expect = 5.9e-55
Identity = 118/176 (67.05%), Postives = 122/176 (69.32%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNA                 
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNA----------------- 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA 177
                                      ELILSEKEEPVKKEPETQLA  K KK  A
Sbjct: 121 ---------------------------ELILSEKEEPVKKEPETQLA-AKSKKSAA 131

[Close]
BLAST of Bhi04G001155 vs. ExPASy Swiss-Prot
Match: P51413 (60S ribosomal protein L17-2 OS=Arabidopsis thaliana OX=3702 GN=RPL17B PE=2 SV=2)

HSP 1 Score: 312.8 bits (800), Expect = 2.6e-84
Identity = 157/176 (89.20%), Postives = 163/176 (92.61%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA 177
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA  K KK  A
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKSAA 175

[Close]
BLAST of Bhi04G001155 vs. ExPASy Swiss-Prot
Match: Q93VI3 (60S ribosomal protein L17-1 OS=Arabidopsis thaliana OX=3702 GN=RPL17A PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 4.5e-84
Identity = 156/174 (89.66%), Postives = 163/174 (93.68%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYS+EPDN TKSCKARG+DLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKG 175
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA  K KKG
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKG 173

[Close]
BLAST of Bhi04G001155 vs. ExPASy Swiss-Prot
Match: O48557 (60S ribosomal protein L17 OS=Zea mays OX=4577 GN=RPL17 PE=2 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.3e-80
Identity = 148/170 (87.06%), Postives = 158/170 (92.94%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYS+EP NPTKS KA G DLRVHFKNTRETA A+RKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RR+CGGVGRTAQAK+RHSNGQGRWPVKSA+FILDLLKNAESNA+VKGLDVD L+VSHIQV
Sbjct: 61  RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGK 171
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKE +  +A  K
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 170

[Close]
BLAST of Bhi04G001155 vs. ExPASy Swiss-Prot
Match: P35266 (60S ribosomal protein L17-1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 290.8 bits (743), Expect = 1.1e-77
Identity = 142/167 (85.03%), Postives = 152/167 (91.02%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYS +P NPTKS KA G DLRVHFKNTRETA A+RK+PL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSTDPANPTKSAKAMGRDLRVHFKNTRETAFALRKMPLNKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RR+C GVGRTAQ KNR  NGQGRWP KSAKF+LDLLKNAESNAEVKGLDVD L++SHIQV
Sbjct: 61  RRYCRGVGRTAQVKNRQPNGQGRWPAKSAKFVLDLLKNAESNAEVKGLDVDALYISHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLA 168
           NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE E+ +A
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESHIA 167

[Close]
BLAST of Bhi04G001155 vs. ExPASy Swiss-Prot
Match: P35267 (60S ribosomal protein L17-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 5.3e-77
Identity = 141/170 (82.94%), Postives = 153/170 (90.00%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSR+P NPTKS KA G DLRVHFKNTRETA A+R++PL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSRDPSNPTKSAKACGKDLRVHFKNTRETAFALRRMPLGKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RR+C GVGRTAQ KNR  NGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L++SHIQV
Sbjct: 61  RRYCRGVGRTAQVKNRQPNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDNLYISHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGK 171
           NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE +  +A  K
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEADNVVAPRK 170

[Close]
BLAST of Bhi04G001155 vs. ExPASy TrEMBL
Match: A0A6J1BRY8 (60S ribosomal protein L17-2-like OS=Momordica charantia OX=3673 GN=LOC111005205 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 181 ASS 184
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of Bhi04G001155 vs. ExPASy TrEMBL
Match: A0A6J1HHD8 (60S ribosomal protein L17-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462939 PE=3 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 1.3e-97
Identity = 182/183 (99.45%), Postives = 183/183 (100.00%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 181 ASS 184
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of Bhi04G001155 vs. ExPASy TrEMBL
Match: A0A1S3BCV8 (60S ribosomal protein L17-2-like OS=Cucumis melo OX=3656 GN=LOC103488496 PE=3 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.1e-96
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETA AIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 181 ASS 184
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of Bhi04G001155 vs. ExPASy TrEMBL
Match: A0A6J1KDD3 (60S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111492225 PE=3 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 1.8e-96
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE VKKEPETQLATGKPKKGQA+RSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVKKEPETQLATGKPKKGQALRSG 180

Query: 181 ASS 184
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of Bhi04G001155 vs. ExPASy TrEMBL
Match: A0A6J1KKP7 (60S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111496586 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.5e-95
Identity = 179/183 (97.81%), Postives = 180/183 (98.36%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLVKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLL NAESNAEVKGLDVDLLHVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLVNAESNAEVKGLDVDLLHVSHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGK KKG+AIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKSKKGRAIRSG 180

Query: 181 ASS 184
           ASS
Sbjct: 181 ASS 183

The following BLAST results are available for this feature:
BLAST of Bhi04G001155 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G67430.11.9e-8589.20Ribosomal protein L22p/L17e family protein [more]
AT1G27400.13.2e-8589.66Ribosomal protein L22p/L17e family protein [more]
AT1G67430.25.9e-5567.05Ribosomal protein L22p/L17e family protein [more]
BLAST of Bhi04G001155 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P514132.6e-8489.2060S ribosomal protein L17-2 OS=Arabidopsis thaliana OX=3702 GN=RPL17B PE=2 SV=2[more]
Q93VI34.5e-8489.6660S ribosomal protein L17-1 OS=Arabidopsis thaliana OX=3702 GN=RPL17A PE=2 SV=1[more]
O485572.3e-8087.0660S ribosomal protein L17 OS=Zea mays OX=4577 GN=RPL17 PE=2 SV=1[more]
P352661.1e-7785.0360S ribosomal protein L17-1 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
P352675.3e-7782.9460S ribosomal protein L17-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
BLAST of Bhi04G001155 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BRY81.3e-9799.4560S ribosomal protein L17-2-like OS=Momordica charantia OX=3673 GN=LOC111005205 ... [more]
A0A6J1HHD81.3e-9799.4560S ribosomal protein L17-2-like OS=Cucurbita moschata OX=3662 GN=LOC111462939 P... [more]
A0A1S3BCV81.1e-9699.4560S ribosomal protein L17-2-like OS=Cucumis melo OX=3656 GN=LOC103488496 PE=3 SV... [more]
A0A6J1KDD31.8e-9698.3660S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111492225 PE=... [more]
A0A6J1KKP74.5e-9597.8160S ribosomal protein L17-2-like OS=Cucurbita maxima OX=3661 GN=LOC111496586 PE=... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001063Ribosomal protein L22/L17PFAMPF00237Ribosomal_L22coord: 17..152
e-value: 7.1E-39
score: 132.2
IPR001063Ribosomal protein L22/L17CDDcd00336Ribosomal_L22coord: 15..151
e-value: 1.75189E-36
score: 120.673
IPR036394Ribosomal protein L22/L17 superfamilyGENE3D3.90.470.10Ribosomal protein L22/L17coord: 1..182
e-value: 2.6E-76
score: 257.4
IPR036394Ribosomal protein L22/L17 superfamilySUPERFAMILY54843Ribosomal protein L22coord: 1..154
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealTIGRFAMTIGR01038TIGR01038coord: 4..154
e-value: 5.4E-61
score: 202.9
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealPANTHERPTHR1159360S RIBOSOMAL PROTEIN L17coord: 1..183
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealHAMAPMF_01331_ARibosomal_L22_Acoord: 2..154
score: 24.237747
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..167
NoneNo IPR availablePANTHERPTHR11593:SF3560S RIBOSOMAL PROTEIN L17-2-LIKEcoord: 1..183
IPR018260Ribosomal protein L22/L17, conserved sitePROSITEPS00464RIBOSOMAL_L22coord: 127..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M001155Bhi04M001155mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome