Bhi04G001121 (gene) Wax gourd (B227) v1

Overview


Name	Bhi04G001121
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr4: 35583197 .. 35585271 (+)
RNA-Seq Expression	Bhi04G001121
Synteny	Bhi04G001121

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCCCTTCTCATAAAATCCACAACTCCGAAACGCTAATTTTCATATGTGGAAGACATAGTACGATAAGCCATGGACGAGATTAGAGCTTCTTCAACGCCGCCGCAAGACGACGGCGCAGGGACGTTTTCCGGTCGGAAACAAGAAGCGTCGGTGATGGATGGCGTTAAGAAAGGGTGGAGGTTCTTTTGTGCATCTTCTCAAGAGACGCTGCGATATGTCAAAGCCTTTTTCGTTGGTTGGGTTAGTTCTTTTATATTCTTTTGGTTATTTGAACTCTCTGTAGTCTGTACTTGGTTAGTGCCAGTAATTTTAAATATATAATTTTTTTTTATTTAAAGAAGTCTCTGTAATTTTATTAATTCTTAGTTGATTTTTATGGTGAAATAATTATAATAATTTTCATATACAGAAATATAATATATAAATCTGTTTTCAAAATAATAAATAGCAGAAAAAGTAATAAAGACTAAAATTGAATGACTAAAATTCAAAAAAAAAACAAAATCTAATTAAAATGATATTTAAACCTATATAGCTCTATCTCCGTTCACTTATATAAGTCCTCTTCCGAATGATTTTTAATGTAGTGTTTTAATTTTTTTAATTAATTATTTATTTTCACTTAAAAGAATCTCGAAATAATTACAAAAATGAGCCTGAGTGAGAGAAAAGAGAAAGTGAGGAGGAATAAGAGAAGTGATAACGAGAGAGAGAAAAAATGTTTTGGAAAAAGAATCCATACCTTAAAAGGCCTCTTTTGATAAAAAGAATTTAAATTCTGTTTTATGTTTTTGATTGACACACCACACCCTTTCGATTCTGTTTTTGAAAAGTTGTTTTTGATTCTAGGATCTACACGATATAAATTTTAAAAATAATATTTTTATGTTTTAATTGAATCCAAAATTTATAACTTTATCCTAAGACAAAATAATAATTATAAAAAAAAAAATTAAGGTAAAACATTTTCATAAATAAATTAATAATAGTTTATTGTTAATCTAAATTCAATAAGTTTTTTTGTTAAAAAATTATTTAAGTTAGGATCAAAGATAGAAAGGTTTTGCTCTGAGAGAGCCTTTTCAACTTCTTTCTTTTCTCCTTGTATTCAATCAATGCAATAGTAGCTACAATCCTATTTTCTTGTATACACTCGTTGTCCCACGATATGGTTACATAATAATACAAAACAATAAAGAATATATCACTTGGTTTGGTTTGATTGGTGGACAGAAAACAAATTAAAAATAGTGACTCATTTCTATTTTCTTCGTGTCTTTTTCATTTTTATTTTCTTAAATAATAATTTGAATATGCTACCAAACACATATATAAAAACATAAAATACAACCATGTTCTTATTGAATCCTTCGTCTCCAAATTTCTAGATTCTCTGTCAAATAGATCGAGAGTGAAATCCTAATCTAGTGTGTACTTTGTAGTGATTCGGTTGGTTAATTTTACCCCAATAGGACATAAGACATAAGTAAAAGATAAAAAAAAAAAAAAAAAAAATTAAGTTGATGACCCACCTATAAAAGTATGAAAATCTTTTATAATTTATCACGTCAGGGATGATGATACCTATCGTAGTCTAATGCAATTGCATACCTTTGTGAATGATGGGTTATGAATCATATCTGGAAAAAAATAATAATAATGGTTTCTAACTTGCAATTAAGACGTCAATCCAAATAGAGGAAGGAGGTTATAACTTGTAAGAGAGGATGTTTGATTGGGCAGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGCGGCTGAAGCAGACTTAAAGACTGCCAAAATGCAGGTTCAAGCTACCGAGGCCGCAGAGAACACCAAGAGAGGAATATAATTAACAAATCAAAACTAATAATGACAAAAGATCTGAATCCTTTGTGTTTCAGCTTGTAACCATTAGCATATAAATATTTTGGAATGAATAATAATATCCTCTTTTTGGTTTTTGCCTTTCACAACACACGAGACCAAGAAAGATATCCCCAGAGGTTCGTTATTTCTCCTCTGTTTTTCTAAACTATAGTTCAAGCAGTAATCTTTAGAAGTTCGG

mRNA sequence

AATCCCTTCTCATAAAATCCACAACTCCGAAACGCTAATTTTCATATGTGGAAGACATAGTACGATAAGCCATGGACGAGATTAGAGCTTCTTCAACGCCGCCGCAAGACGACGGCGCAGGGACGTTTTCCGGTCGGAAACAAGAAGCGTCGGTGATGGATGGCGTTAAGAAAGGGTGGAGGTTCTTTTGTGCATCTTCTCAAGAGACGCTGCGATATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGCGGCTGAAGCAGACTTAAAGACTGCCAAAATGCAGGTTCAAGCTACCGAGGCCGCAGAGAACACCAAGAGAGGAATATAATTAACAAATCAAAACTAATAATGACAAAAGATCTGAATCCTTTGTGTTTCAGCTTGTAACCATTAGCATATAAATATTTTGGAATGAATAATAATATCCTCTTTTTGGTTTTTGCCTTTCACAACACACGAGACCAAGAAAGATATCCCCAGAGGTTCGTTATTTCTCCTCTGTTTTTCTAAACTATAGTTCAAGCAGTAATCTTTAGAAGTTCGG

Coding sequence (CDS)

ATGGACGAGATTAGAGCTTCTTCAACGCCGCCGCAAGACGACGGCGCAGGGACGTTTTCCGGTCGGAAACAAGAAGCGTCGGTGATGGATGGCGTTAAGAAAGGGTGGAGGTTCTTTTGTGCATCTTCTCAAGAGACGCTGCGATATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGCGGCTGAAGCAGACTTAAAGACTGCCAAAATGCAGGTTCAAGCTACCGAGGCCGCAGAGAACACCAAGAGAGGAATATAA

Protein sequence

MDEIRASSTPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGKKMTAKSEKEAAEADLKTAKMQVQATEAAENTKRGI

Homology

[Close]

BLAST of Bhi04G001121 vs. TAIR 10
Match: AT2G38465.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 2.9e-10
Identity = 36/73 (49.32%), Postives = 45/73 (61.64%), Query Frame = 0


Query: 20 SGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGKKMTAKSEKEAAEADLKTAKM 79
          + R+   S+ D VK        + QE   YVKAFFVG  K++TAK+EKEA EA L   KM
Sbjct: 6  TSRQPAKSLSDRVKTNCLSMAVTCQEGFSYVKAFFVGQTKRLTAKNEKEATEAHLTETKM 65

Query: 80 QVQATEAAENTKR 93
          QV AT+ AEN K+
Sbjct: 66 QVDATDEAENAKK 78

[Close]

BLAST of Bhi04G001121 vs. ExPASy TrEMBL
Match: A0A5A7VBV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004430 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.0e-31
Identity = 80/94 (85.11%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MDEIR-ASSTPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGK 60
          MDE R A+STPPQDDGA  FSGRKQEASVMD VKKG   F ASSQETL YVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KMTAKSEKEAAEADLKTAKMQVQATEAAENTKRG 94
          K+TAKSEKEAAEADLKTAKMQVQATEAAEN K G
Sbjct: 61 KITAKSEKEAAEADLKTAKMQVQATEAAENLKNG 94

[Close]

BLAST of Bhi04G001121 vs. ExPASy TrEMBL
Match: A0A1S3BC67 (uncharacterized protein LOC103488109 OS=Cucumis melo OX=3656 GN=LOC103488109 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.9e-31
Identity = 79/94 (84.04%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MDEIR-ASSTPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGK 60
          MDE R A+STPPQDDGA  FSGRKQEASVMD VKKG   F ASSQETL YVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KMTAKSEKEAAEADLKTAKMQVQATEAAENTKRG 94
          K+TAKSEKEAAEADL+TAKMQVQATEAAEN K G
Sbjct: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNG 94

[Close]

BLAST of Bhi04G001121 vs. ExPASy TrEMBL
Match: A0A6J1KRV8 (uncharacterized protein LOC111495934 OS=Cucurbita maxima OX=3661 GN=LOC111495934 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-30
Identity = 77/93 (82.80%), Postives = 81/93 (87.10%), Query Frame = 0


Query: 1  MDEIRASSTPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGKK 60
          MDEIRAS+ P QDDGAG FSG K+EASVMD VKKG     ASSQE LRYVKAFFVGWGKK
Sbjct: 1  MDEIRASTPPLQDDGAGRFSGWKEEASVMDRVKKGCMAVYASSQEALRYVKAFFVGWGKK 60

Query: 61 MTAKSEKEAAEADLKTAKMQVQATEAAENTKRG 94
          MTAKSEKEAAEADLK AKMQV+ATEAAENTK+G
Sbjct: 61 MTAKSEKEAAEADLKMAKMQVEATEAAENTKKG 93

[Close]

BLAST of Bhi04G001121 vs. ExPASy TrEMBL
Match: A0A6J1GHI8 (uncharacterized protein LOC111454014 OS=Cucurbita moschata OX=3662 GN=LOC111454014 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.5e-30
Identity = 77/97 (79.38%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 1  MDEIRASS----TPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVG 60
          MDEIRAS+     PPQD+GAG FSG K+EASVMD VKKG R   ASSQE LRYVKAFFVG
Sbjct: 1  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVG 60

Query: 61 WGKKMTAKSEKEAAEADLKTAKMQVQATEAAENTKRG 94
          WGKKMTAKSEKEAAEADLK AKMQV+ATEAAEN K+G
Sbjct: 61 WGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKG 97

[Close]

BLAST of Bhi04G001121 vs. ExPASy TrEMBL
Match: A0A6J1BRY6 (uncharacterized protein LOC111005010 OS=Momordica charantia OX=3673 GN=LOC111005010 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 3.0e-18
Identity = 53/63 (84.13%), Postives = 57/63 (90.48%), Query Frame = 0


Query: 29 MDGVKKGWRFFCASSQETLRYVKAFFVGWGKKMTAKSEKEAAEADLKTAKMQVQATEAAE 88
          MD +K G   F ASSQETLRYVKAFFVGWGKKMTAK+E+EAA+ADLKTAKMQVQATEAAE
Sbjct: 1  MDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAE 60

Query: 89 NTK 92
          NTK
Sbjct: 61 NTK 63

The following BLAST results are available for this feature:

BLAST of Bhi04G001121 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38465.1	2.9e-10	49.32	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

BLAST of Bhi04G001121 vs. TAIR 10


Match Name	E-value	Identity	Description

BLAST of Bhi04G001121 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VBV2	4.0e-31	85.11	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BC67	8.9e-31	84.04	uncharacterized protein LOC103488109 OS=Cucumis melo OX=3656 GN=LOC103488109 PE=...	[more]
A0A6J1KRV8	1.5e-30	82.80	uncharacterized protein LOC111495934 OS=Cucurbita maxima OX=3661 GN=LOC111495934...	[more]
A0A6J1GHI8	7.5e-30	79.38	uncharacterized protein LOC111454014 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1BRY6	3.0e-18	84.13	uncharacterized protein LOC111005010 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 60..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001121	Bhi04M001121	mRNA