Bhi04G001067 (gene) Wax gourd (B227) v1

Overview


Name	Bhi04G001067
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	S4 RNA-binding domain-containing protein
Location	chr4: 33496772 .. 33516186 (-)
RNA-Seq Expression	Bhi04G001067
Synteny	Bhi04G001067

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCATTAGCATCTTCTTCACTCTCATTTCTCTCAAAACCTTCCTTCATCCTCAACCCCATTCGCGCCATTCCTCGCATTTCATGTTCGCTTTCCTCCAATTCCACTCCCAACGCCTCATCTTCGTCTTCATCTTCATTGGAGTTCAACATCACCTTCGCTCCCCCTAAACCGAAGCCTAAATCCGAAGTTGAAGGTCCTTTTCAGTTCATCGATCGAAACACTGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGCAACCTCAAACTCCAATCACATCCTCCTACACGGTTCCTTCATTCCATGTCGGAGGATGAAACCAAGCCCAAGAAGAAGAAGGTTTCTGCTGATAAACGGCCAACCGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGATTTTACAATGAGAATATTAGGGACGCGTCGCAACGTCTCAGTAAAGTTCTTGCTGCCGCTGGAGGTTTGTGCTTCTCTAACTAAAATGCTAATCCTGGCTTATAGTAGCTCGGCATGTCTTGTCACACAGCATTCTTTTGTGATTGTTATGTGCTCTTTACTTGTCGGTGTTTGGTTCTTGGCGTGGTAGTTAGTCGTCTTTATTTGGGTTATTTTCGAAAAATATTTAGTTATTTCGACAATGGGTTTTGGCAATAGGACGGAAGCATCCCTTTCTAGTTTAGTTAGTATTAGAATTTGTAAGTATAGTTGTGCAAATCGATGCTAAAGGTGATTTTACTTGGCATGAACTTCAAGTTGTTTATTACACGTGGATAGAATGGAGAGACTGAACAATCTGAGCGGTTTCTACACCAGTGTTATGTGATATACGAGCTTAAATATAGTCTCCTTCAACAACTATACTTCAAGAAGAAATAATCAAAACAGCACAGTGGACCCAGATTAACAAAGGCACTCAATCGGGTAGAGAAAAAGTTGATAGGGGTTCAAGCTCTTCCATCTCAACATGTGGTTCCATCTTAAAACCAATTGGCAATGTGAGGAGTAGGCAGTAGCCCATCTATCTTATTAAGAATGTGAGATTCCTTGACTTTTTCCGTGTGGGATCCTCAACATGCCCTTCAAGATGATGCCTCTTTTGGGTTCACAATTCTTGGTCAGATCCCAATTCCTTTTTATTGGATCAAATACCTGTTTGGGATATCATATTAGATAATAAGAGGGTCCATCTCAAAACCAATTGGCAAAAAGAGGAGTAGTTCATATATCTTATTAAGAACGTGAGGTCCCTTGATTTTTCCAAGGTGGGATTCTCAACATGCAACCTTCTTTTATTCTTGTTCTAGCAACATCTTCTTATTTGTGGCTTTCTTTTTTTCTCTTCTATTTTTGCTGTTTGGTATTCTGTGCTCTGTTATTTGCTGTCTGTTTGGTTTAAGTGTTATTCTTCCCTTTGAGCTCCATTCTCTTTGTAAAACCACAAATAACAGAGTATGTAAGTTGACATGTATTGTAAAAATACGTTTTAGTAAGTCATGAATTCACGATAATAGAATCGATTTTTTATAAAATTAAATGTTGGAACATTTGGCCTGAGAGAAACTGGAAGAGGTAGAGATATCTTGTGGGGGTCTGGACTACAACTTGGTTAAATGCTATTTGCTACCCTTTGGGCATTTGGTTCCAAAGGGTTATTCTATCTATCCTCTATCCATTCACCCCAACAACTGGATCCTTGTTTACAGTGGTAGGCACTTAAGTTGGAATCTTTCCATAATACCATGCTGTTTCTAGCTAGCCTCTCAACCCTTGTTAGGAGGAGGGTTGCGGATGAAAATTCAGTTGTATACAATTTGGTCGAGCTTGTAAGAACAGATTTTTATTTATTTTTATTTTTTATTTTTTGAAAAGGAAATAAAGATTTCATTAATATATGAAAAAAGACTATTGCTCCTAAATACAAGATCTCCAAATAGAAGACAAAAATAGGAGACAAACATATACACAATTAACGAAGAGTATAGGCAAAAGGAAGAAAACCTTCGACAAACTTAGAGAGAGACTCATCTTAAACTAAGAGACAAACCGAACCAAGACAAACCATGCCAAAGACAGAGAAACAACAAACCAAATAAACTGACACAAAAGATAAAAAAAAAAACTCTGAAAAAGCCCTTATGAGAGGGAGACAAGACCACAAAGCAAATGACACTTAAAACGTAACTCAAACACCTCGGACAATTCATAAAAAATACAAATAACTTTTAACAAACAAGGTGAACACCCTTAAACTGCAGCTCCTGGAGAACTAGAAGGAATTGCCTGGAACTGAAGACCACAAGCCTTAACCAAAGAAGCGAATCTGTCATGAATGAAAGAAAAATACATTGGAGAAGCTGCAGCAAAATGCTCTGAATAAATTATAATTGTTAGTTTCTTTGATCTAAAAGTTAAACTTCTAAAGCAATGTACTTGATCGTTCTTTTTCTATTGTTTAGCATTGGTCATGGAGAGTTCTGTTTTGTCTTCTTCTGCAGTGTTCTGTTTACATTGGTTACCAATGTCCCCATAAGATCTCATAGTTGGTATTGTACTCCTCTTTTGTTTGTCAGTGGCATCAAGACGGAGCAGTGAAGAGCTTATTTTTGAAGGTCGTGTGACTGTTAATGGTTCTGTTTGCAATACTCCTCAGGTTAGTTTTCATGACATTTGGGTTGGATAGATTTTGTCTTAACTATGAAGGAATAAATGATTTCACCTTTCTTCAGACTCGGGTGGATCCTGCAAGAGATGTTATTTACGTGAATGGAAATAGGCTTCCTAAGAAACTACCACAAAAAGTTTATCTAGCTCTGAATAAGCCAAAAGGGTAGGTCACTTATTCTCTAAGATCGATTTCCCTTTCCTACCTCAAGCTTCTCTTGGGAATTTGGCTTTTATGTGCTTCCGTTGCTAATCTTATAAAATGCCATGGCAGGTATATTTGTTCGTCTGGAAAAAAGGAGTCGAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGTATGTCAAACTCAAACCTACTAATCATATTGTTTTCAAGCAAAAGATTTGAAAGGAATGATAATCTTATGATCATTTTGATGCATGAAATATTGTTTGCAAGTTATTGAACTGACACTTTATATTTGCAGGATAAAACATATCCAGGACAACCCAAACCACGGCTGTTCACAGTTGGCAGACTTGATGTTGCAACAACTGGGTTGATTCTCGTGACAAATGATGGTATGCTATACAAAATTCTCATGGTTGCCTCCTTATTTAGGATTACTGTACAAAAGTTGGAGTTGAAAGGATAGATCTTGAACCATTTGCAAAATTATCGTTGATATTCTTTCAGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAGTAAGTGATTTAAATTTATTTCCTTACTCTTGCTGATGGCATTTAAAGTTACCTACAAAGGTAATTTCTGGCATTATTTTCTTCATGGAGTAATTTAGAGATCAACAGATTTATAAAAATCATTGAGACCATAAACATCATAACAGGAATGATTGTGGGCTATCTGTGGCGTATTTATTGAATGAAAATTGCTGGAACCTTTACCTACTGACCATTCAGGGATGAGAAATATAATAGAACTTGGTTATATATTCACTACAGCCAAGGAAGCCGAGGCTCCTTCCCTTACAAGCTCTCTGAGCTACACTCAAGTCTAAGCAAAAAGATGAAAATCTCTCTCCCCCCCCCCCCAAAAAAAAAAAAAAAAAATACTCCTTGTAACAACTAAATATTTCCTCTCGGCCCCACAACAAATTCACCACTCACCCATAACTAACTAATTTCCCTCTCTCCATTATTTACATTTAATTCTCCCCATCTCTTTCTTTTTCTCATATATCTTTTAATAATCGGGGGTCTATTACTACCCGCCCCCTCGAAAAACTACCTTGTCCTCAAGGTGAAAATCAGGAAATTGCTCAGCAATTGGCAATCCATTTTCCTACATGGCGTCCTCAGATGTCATGCCATCCCATTGAATTAAAACTTCAAAGTCGGTGGGTGAAACCACAGTGGTTCCAATTTTTCGAACATCCAATACTGCGGTGGGCTGCGGTTACCAAGTCCCGTTCTTCTGCCAGATCGGGGGGGCTGCAATCCTTGTTAACATAGAACCAATCGCCCTACGCAGCTGAGAAACATGAAAATCTGGGTGAATATTTACGTTTGCTGGCAGGCAGAGCAAACTTATACGCCACAGGTCTGACTCAATCAATAATCTGAAAAGGGCCAATGAAACGAGGAGCAAGTTTTGGATGTTTATAGATAAACAGAGTGCTATGCCTGTAAGGTTGGAGTTTAACATATACCCAATCCAAGATTGCAACTCCACTTCCCTTCGTCTGACATCCGTGAAAGCCTTCATACGTTGTTGTGTTCTCTCTAGTGTAGCTTTTAAATCCTTCAACATATCATCTCTTTCCTTTAAAAGGGTATCGACCTCACCTACCACAACAACTCCCTTTTCACAAGATATAAGTGGTGGAACCGGTCGGCCATATACCACCTCGTACGGATATTTCTTTAATGATGTGTGCTAAGAGGTGTTGTAGTTATATTCTGCCCATGCTAGCCACTTTGACCACTTGGTCGGTGTCTCCATAGTAAAACATCGTAAGTAAGTCTCCATGCCTCGATTCACCACTTCCGTTTGACCATCCATTTGAGGATGATATGAAGTACTTCATTTCAGTTGAGTACTCATTGGCTTGAATGATTCTTCCCAAAATAAGCTTGTGAATACCTTATCTCCATCCGATACAATACTTCGTGGCACACTGTGTAGTCTTACAATTTTGTGGAGGAACACTGTTGCCACTGTGGTTGCTGTGAATGGATGCTTTAAAACAATAAAGTGGGCATACTTGGATAACTGATCCACCACTACCAAAATTACGTTGTATCCTTCGGATTTCGATGGCCCATCAATGAAGTCCATAGGGATGTCATCCCAAATCATTTCTGGAACAGGGAGTGGTTGTAATAAACCCGCTGGCGCTAATGACAGATACTTGGCCTGCTGGCATATAGAACAGTCACCCACGAACGATCGTATACCAAATTTCATACCTTTCTAGAAGAACTCTTTTGTAAGGCGCTGATACATTTTGAAGGTTCTGTTTTGACCTCCCATCAGGTTGTTATGGAATTCCTGAAGTAATAGAGGGATTGTGGGTGATGTGGAAGGTAGAACCATTCTCTGTTTATAGAGTAGCAAATCTCCCTTCATGGAATATCCTTTCGGAGCTAAGTCCCTAGCCTGGATGACTTGTCGGATTTGCCTCAATTCCTCATCTTGATCAATTTGATCACCGAATATCGCTGAATTTAGTCTGTCCACACAATTCAAAGCGCTTAGTTCCATTGTTGCTGGTACACGAGTGTAACGACCCGACTTTCTAAAATGGGAATCGGACCATTACTATATGCACGCATAAATCTCAAGACGGAATTTTCACAGAATTTGACTAAATCCAAAGAACAAAACAAATCTTTATTATACAAACTATAAATAAATAAATAAATAAATAATAATAATAATAATAACTAAAATATAATAGAATAAAATAAAATCTTTGTTCGAGGTACCCCTAGCTTTAATTTAAAATAAATTAAATAAAAAGAAATAAAAAAAATCGAGTGAAATATTCAAAGAATTTAAAGGTTTAATTACAAAGCTAAAACTTGCAAACATAAGAAAAACATGTGTGGAAGCGTTGTCAAGTCCTAAGGCCCAGCCATGGATTCTTCTTGTCATTCGCCATCCTAACCTTTCCTTTACCTAAAGAAAAAAAAAGGAAAATGGTGAATATAGAAATACTCGGTAAGTGACCCACTAGGAGTATAGGTTAGTATCCCTATCAAGACAAGGGTATGCATCCCAACATAGGCTTAATGGGCGAACACAAAAGCACGCTTTCATAGGAAGTGACTCTGAAGAGACACAATAACATAATCGTGGGTGACGATCCCATAAGGACGCCGAAACATACTCAGAGGATGAATACATTCCGATAGGGGTGCTAACCATCACCATCAATCCAACATGCAACATACATCGTCCATAATCATAACAAGCCATAACATATTATACTAATCATAGTAGCATAACTCATGAGTTTCCTGAATAGTCTCAACAATCGTATAACAATCAACCATGGCAGAATATTTCATCACAACAGAAACATGCCTATAGTGCATTCACAGTCCTAAAATCAACTTGGAGTTTAAGGGTGAACCGGTAGTAAAACACTTTCCTGACTTTAGGCCTAAACGTTGTTATTCAAGCGAGCCAACCCTTCTAGTTTCCACACACTTTGAATCAAATCCCCACATGTGGTTTATTCCAAAAACCACTCCAAAACTTCAATTGAGCAACCGAACTTGAAAGTAGGCCACAACTAATAATTATAAACTAAAATTACAGCATCCTTTACACTCCAATCAACCAAAAACTCAAATCCTTACAGAAATCTTGTTGAAATCAGTCCCGTACTCACTGGACAACACCCTAAAACCTTCCAAAACTCCAATCTAACCCTTCACACACCAAGAACAAGATTTTTTAAGCCAAAAACTTGTTGGGTAATCAAGAACCAAACCCAAAAAATTAACCAAATGCCAAGAACTTACCCCCAAACGACAAGTTAAGGGACGACACGAGGCAAAGCCGGTGGCAGTAGATGAACGGCGATGGAGCAACACAATCGGACGACTCCAATGACGTTTCAATGATCGGCGGCGACTGGGAGTTGAGGATGGTGGACGAGAATGATCGGAGGAGAGACGATGGGACGCGACCGACTGGAGGAGGGACGACAGTGAGCGGTGGCTGGGAGATGAGGACGGCGGACGGCTCCTACCCGGCGAACGACTGAGACGAACGGCGCGCTAAATGTTTGGGGGGGGGGTCTCATGTGGCTTCAAGGGAGAAGAAGCACGCTTCCTAAGGCAACCTTAACTTGGAAATATATATATAATATATATATATATATATATATATTAAAACCCTAATTCTTTTCCTAAATATAAAATCCCCTTTCACTTCTCAAATTCTGAACTCAAATTAAAACCCAAAAAGAATATTTTATTAATCAAGGAAGTCTTTTTCAAATCTTCTCCAAATTAATTTCAATAAAAAAATTCAAATAAAAACCAACCCTTCAATTAAATTAAAACCACCCTTAGTTCCTTGTCATACTAATTAACAATTGAATTATTTAAACATAATAACTCAATTTCCTCTCAATCTTCACATAATAACACAAGACAATTAGATAAAATTTCCCTGAAAATTTGGGTTGTTACAACGAGAAAGGCCATCAGTAGCCGAATTTTCCAAACCTTTCCTATATTCAATCACAAAACCATACCCAATCGGTTTAGCCACCGATTTTTGGTATTCTCCAGCGATAATGCGTTGCTCCAATAAAAACTTGAAACTTTTATGACCTATTCTCACTACGAATCGTTGCCCCAATAAATACAACCTCCACTTCTGCATCGCCAAAACTATTGCGATTAATTCTTGCTCATATACTGCCTTCAAACGGTGGGTTAAGGGTAAGCATGGCTGAAGTACGCTAGGGACGACCTTACTGTATCAGTACAACCTCTACTCCCACTCTCGGGCATATGTTTCAACCATGAATGGTTGCTTGAAGTCCCGCAACCCCAAAATAGGGAGTTTTTTCATTGCCTTCTTTAATGTCTCGAAGGCCATTTTAGCTTCCTCACTCTTGGAACTTGTCCTTCTTGAGTTGCCGTGTGAGTGGAAAAGCAATCGAGCCATAATTAGTCACGAACTTGTAGTAATAACTCATCTGTCCAAGAAAACCCTGTAGGTGTTTAACGGTGGTTGGTACTGGCCACTGTTTCGTACCTTCGATTTTCAAAGGGTTAGCTGCTACTCCATTTGCTGATATCAAATGACCTAGGTATTCAATTGTTGATGCTGCAAACGTACATTTTTTTAAATTGGGGGACAAGTGATTTATGTGATCATGAGCAGAGGTGCTATGCACCAATATGTCGTCAAAGAAACCAAAACAAATTTACGCAAATAGGGGCGCATGATGTCATTCATTACCGATTGAAATGTTATTGGAGTATTGCGCAACCTGAAAGGCATCACCAAAAACTCGTAATGTCCCTCGTGGGTTCTAAAAGCTATTTTGTGGATATCCTTTGCTGCTACCCTGATTGGAGATCAATCTTAGAGAATATGGTTGCTCCCGCCAATTCATCATGGAGGTCATCAAAGATCGGAATTGGGAAGTGATCTGGGACCGTTGCTTGATTAAGAGCTCGATAATCTACGCAAAACCTCCGACTATCATCTTTTTTCTTCACTAATAGTACCGGGCTGGAAAAGGGACTGGTGCTTGGCTGTATAACCCCTGCATTCAACATCTCTTCCACCAAATGTTGAATCTCGTCCTTCTAGAACTGAGGGTAGCGATACGGACACATGTTTACTGGCCCTTCCCCGGGTTTCAGCTCAATGGAGTGATCATAGTGTCGTATAGGTGGCAAACCCCCACTAGCTTAAAGACTTCTTGATATTTTTGTAGGGCCACCTGGATTTCCGAATTTGGAGAGGTCTGATCATGACTGAGGTGAGCATCATTCCTTTGAGCTGCTACTGCATTTAATTCTAGCAAGATCCCTTGGCCTTCCTCCTTCACGAACTTCATCATGGATTGCAGGGAGACTTAGGACTTCATTAAGCTTTTGTCCCCTTTGAGGTTGTACCTTCCCTTCACTGATTTGGAAGTCCATTTCAGATGTACTCCAATCACATTCGACATGACCCAACGAACCAATGAACACCTAAAATAACATGTGCATTGCTCAACGACAAAGGGAAAAAATCATTAATAATAGCCAAATTTGGAAGGTTAAGAACTACAACTTTGCAAACGCCCTTTGTTTGAATTGAATTCCCTGTTCCCAACATAATTCCATAGCTTGAGGTTGGAGCTCGCGGTAGTTTGAGGGTATCTACCAGTTTTTCGTCGATGAAGTTGTGGGAAGCTTCACTATCGATTAACACTAGAGATATCCACAGGGTGGGGCGGGGACGGGGAAGCCCTCCCCGTCCCCGTCCACGCCCCCTATTCCCCATGGGGATTTCGCGGGGATCAGGTTCCCCGCGGGAAAATTTCCCTACCATCATTTTTTTCTAACAATTTTTTTTTTTTAAAATTTCAATTAAATATATATTTTCAGTAATTCTTTAAACATATCCAATACAACTTTCACTTAAATAAAATATTATCAATTTTGGTAATAAAAACAATAATACACATTCAATTTAAAAAGATATAACTAAAATGCTAAATTTTCATTATTTTTATAAATTAAAATTCAACAATTAGAACATTCTATCTTAAATATTACAACATCTAAGGAAGTAAAGTAATAAAATCTTAAACTTAAATAATTAAAACCTCTATAATTATCCTAACAAAGTCTACAATATTAATATTATATATATATTATAAATTTATAATTTATATACAAAAGTCGGGGCGGGGCGGGATGGGGACACGAGGTGGGATCAGGGAAAATATTCCCCGTCCCCGACCCCGACCCCGAATTGCAAACGGGGAAAAAAATTTCCCACTCCCTCCCCCATTCCCCATGTATTCGAGGATTCCCCGCCCCGTTCGGGGCGGGTCCTTGCGGGGCCCCGACTCCATGGGTTTTTTGGACATCTTTAATTAACACCACCACCTCTCTATCTCCCATTGTGCCCATAAACTTCACCATTTTGGATGAGTCAATCCCTGCCAGGGAGTTGAGAGACAGTTCATCGACTTTCTCAGCTTCGAGGTCTTCTTTAGCGGCTGGGTTCTCTTCCTCCTTGCCATTATAAATCAATAGATTCAACTTTTTTCTTTACAACGATGACATGGTGTGTATCTTTCGTCACATTGGTAGCATAATCCTTTGTCTCGACGGCTTTGCATCTCATTGTCCGACAGCCACTTGAACGAACTGGCAGTGAACGTTTTCCCATTCACATCGCGTAGGGTCACCGAAGTCAATGAACTAGTCGTACTTTGACTAGGGTTAAGGGAGATAGTTTGGGCTGCTGGAGTACTTGGGCTTGTTTGACCCGAAATCGAATTGGTGCCCGATGAGGTAGCAGATCCGCTTGCCTTAGTCAATGGGCTTGGGCTTCCTCCCCCCTTCTTTCTACGGGCTTCTTCAATATCCTCAATCAATTGGGCCATTCGCATCTTCTCCTTGATGCCCACCAATTTGAACATTCTCATCTCCACTTGGATATCCTCCTTCAGCCCACTCCCGAACTTGTTCTCTAGCGTTTCATTAGATAGATCTTTCAACGGTCCAAATAGTTGTTCAAATCGGCGCGATATGCCCCCATCGTCCCTTCTTGTTTCAGGGTGAGTAATTGGGCTCGTCGATCTTCCTCTTTCGCCGGTAAAAAACGAAACAACATCTGCTTTTTGAACTTCGCCCAGGTGTCCATCGACGTTTGTTCCTCTTCTCGTTGGTGCCATTCCAACACCTCCCCTTCCAAACACAACACCGCCGCTTCGATCTTATCCTTTTCCGACAATCGATTGACAATAAAGTATCGTTCCACTTGATGGAACCGGTCCAACGAATCATCTCCTACCTCTCCTTTGAAAATTGGTATCTCAAGTTTTCTTAAACGCATATCGAATGACGGTACTTCTCTCTTTTCTCTTTCAGACGTACTTCCCTTCCGTTTTGCCTCTTCAACTGTTGGTTGTTTGCCTTTTTCCATCACTGTTTGCTCAGACGACGCTGATTTCCCCCCATCATCCATCGTACCTCCTTGCCTTGACCACACCTCAAGTGCCATCAACATTTTCTGTTCTATGGTCTTCCCCATCACCTCAAATCAAGTTGCCATTGGCGTTTTCTATCAGTTGTTGCATCTCTGCAAACCGTTGGTCCATCCAAGCTTCCATACCCTAGTAATGTGAGTTGTTCTTCAACCACAGATATTCGAGCCTCCATTTTCTTAACCATCCCCAAGGATTGACAGCTCTGATACCAAAATGATAGAACTGGGTTATATATTCACTGTTTAGACCAAAATAACCAAGGAAGCTGAGACTCCCTCCCTTACAAGCTCTCTGAACTACACTCAAGTCTAAGCAACAAGATGATGAAAATTCCCTACATTTGCCCCCTTAAATACTCCTTGTAACAACCGAATCTTTCCTCTCGGCCCCACAACATAACTAACTAATTTCGCTCTCTCCATTATTTACATTTAATTCTCCTCCTGTAACGACCCAAATTTCTAGTATGATCCTAGGACGTTACTCTATGCATGCATAGGCTTGGCAATACATTTCTCGAAGAATAAGTAAATAAAAGAGATAAAAAAAAAAATTATTTCCTTAAATAATGCTCGAATAAATGAAAAGAGAAATCCTAAAAATACCGTTCGGGGTACCCCTAACCCAATTTTAAAAATAAATAACAATTAAATAAATCAATAAATGAAATCAAGGAATACTTCATAAGATTTTAGAATGCCTGACTCTTAAACCAGACACTAGTACATGAAACCTAAGTGCGGAAGCAATTATTCGTCCAAATGGTCGGGTCACGGATCTCTCTTGTCATTCGCCGATCTATCTCTATCTTTACCTGAAAAACATGAAAGGAAAAGGATCAGTATAAAAGTATACTCAGTAAGCGACCCACTACTGGGCCCATTCAGTGATCTGTTAGCCTTTCCATTGGGACACAAGTGCACAAGGGCATCGTAGGCGTAGCATAGGCATAGGCATAAGGTGCGAACCCGAAGACACGCTTTCATAAGTAGTGACCCCGGAGGGCACAATCATAAACATAAGTGGTGGTCCCAAAAGGATACCGTACATAAGCATAGGGTGTAGGCCCGAAGGCTCACAACATGCAATGTGCATAGCCCAATGGAAACACTAACAGTCACTGTAATCTTATACAGACATAAGCATTCATCCAACATCATAAATCATGCTAAGACTACATAATCGTTCACCATTCATCCATCCATATGCAGACATATAAAAAATATAACATTCCAATTAGAACTAGAGGTACGCATGCTTAAGATCGAGGGCAAACCGTTAGTAAATCGCTTACCTTGGGTTTAGGCCCACGGAAAAGAAAACGAATAGCTGAAACTCCCCCTAAATTAGCAAAGGCTTGAGTCAAAGCCCCTGACCACCAACTAACACAGTTCAATTTGTGGGGCGAATCCCCAAAATCCAAACAAATTAATTCAGCAATCCTCACACAACTTACCCCCAAAACTTGCCAAAAAATAACCAATGAAGGCTTTGGCTGCTGCTACAACACCTTAGAACTTCCACTTCAGTCTCCTAATTCAATATTGGACCAAATGTCAAGCCAAGATTTCACTAAATAGCCAAGATCTTTCAAGAAACCTGAAAAGAACTGACCAAAACAACTAAGTTCTTACCCTACAGTACGCGAACAGAGGCCACACGAGCAGGTCGACGTTGTACGAACAACCACTGCCGCGAGTGTCGACGGCCTTGACGACGACGGTAGGATGCATTTGAGGTCAGCTGCGGATGGCGTGGCTCGCGCCTTCACGGCGATAGCGGACCTGGTTAAGGTCGACGAAGGCAGTTGGCGCAAGTCTGGAACGACAAGTTGAAGCAGGGACACGTGGCGTTGGCCGCGGCGGCTGGACGAACACCGCTTCAGGTCGACGACAAATGGCAACGCCTTCTGGTGCACGATCAACGGTGGCTACGGCTAGGCGGCGGGCTCCTCACGCGGCTGAGAGAAGAAAACCGGCTGGGAGAAGAAGCTTGGAGAGGGCGGCGTCGGCTGGGAGAAGGAGAAGAAGATTTTCCTTTTTCTTTTTTTTTCCCTTTTTTTTTCCTATTGCACGCTTCCGAGGTCCCCCTTTCTAAAATAACCAAACCCTTAACCCTAATTCTTTTAGGAAAAGGCAAAACAAAACAAAAAGAAATAAATATAAACAAAAAAAAAATAAATATCACAACCCCCAATTTCCCTTTTCTTTTTTTGAAAAGGAAACAATTCATTAAATTATGAGAAATGTGAGCTAAGGCCCAAAGTATAAGAGGGTTATACAATGAGCGGAATAACAACCAAAGACCAATCGGATCAGCAAGCGCACCCGGGTATCTCAACTAGGTTGACACCTCCTTAGCGCCCTCATCACATCCAAAAATAAACTAAAACTAAACTAGAAAAATAAGAATAGAACAAAACACTACAATCACAAATAAAGGCCAAACACAGGGGAAAAACAAAACAATATAGTCTGAAAAACCAAAGAAAACAGTAGACTACTAAAGAAGCTAAAATCCACCGCTTGGAAGGGAGACAAACGCTCTCCAGTTGAGATTGAAATCTGATAAACTGTAGCTATTAAAAGGCTTGGAGAGGATACACCAAGAAGAGGCAAGCCGTTGGGCGGATTCGAAGCGATCTTGGCAACCAAGAGACTTATCATGAAACACCCTTTGATTTCTTTCAAACCAAATGTCTGCCAAAAGAGCTTTGACCGCATTAAGCCACAGTATACGGCTGGATTTGTGGAGATTTGTTCCAACTAAAAGCTGCAGCAAGTTTCCCTTAAAATCATTGCTCATAACCCATGAAATATTGAAGAAGGACAACAATTTTTCCCAACACCAAGCTGATTAGGAACATGCAAAGAAAAGGTGGAGGGAATCTTCAAACGAATGAAGGCACAAAGGGCAGATTGAGGGGGAAATATAGCTGGATGTCAACTTCCTTTGTAAAACCGTGGCTACATTCAGCTGTCCATAAAGCATTATCCAGACAAGAATATTAATCCTTCGAGGGCTACAAGTCTTCCACAAGGCCGAGAAAAGAGATTTGTCCAAAGGGGAGGAGGGAGAAAGGTGTAATTTAAGGGAATTGACTGTGAAAAGACCCGAGGCTGAAATGGACCACTCCCTTTTGTCAAAATCCTCTGAAACTCTTCTTGCTGCAAGAACCCCAAGCAGTTCTTGAAAAGAAATCATCTCCTCATCTTTAAGCAAACGATGGAAGGTAATCGACCAAGCGGCCAGTCGGATGTCCCAATGGTCAGCAACCGAACCATTTGGAAACAAGGTGATTCTGAAGAGACTTGGAAATAAAATATTTAATTGCCTAAACTTTGGCCTTGAATTTAAAAGAAACGATTAATTCCACGAATTAATTTAAATCTTACCTAGATTTCGGGACATTACACCTCCTCTCTTTCTTTTTCTTATATATCTTTTAATAATCGGGGGTCTATCAAAATATTGTACTGATTCTTTTTTAGTTATTTTTTCCCTATAAAAATTTGAATTCAAGCATTTTCTTTTTATATTGTGCTTCCTAGTGCATATAGCTTTTAAAGTTTTGAATGTTGGATTTCTGAAAAATGAAAATGCAACATTTGCCCTTTATAATTGTAGATACATTGCAGCGATAGATGGTGCTGTTAGTAAGCAGAACCTGATAGCAATCAGTGAGGGAACAATAATTGATGGCATCCATTGCACACCGGATTCTGTGGAGTTACTACCACGACAGCCAGATATATCAAGGCCTCGTCTGCGTATCGTGGTGCTGTGTCCATCCATATTATAGTTTTTAAATATCTATCCACTTTGAGCGCATTCAACATTCATTACTTCTTGTTTGATCTAATTGGTCATGGAGTAATGATTGTACATACCAACAAAGTCTGTTGCTTTGTACCTTGAATGTTGATGATCTGAGTTTTACTTTATTATTGTTGATGCTATACAGCAGTCTGGAGGAAAATGTATTAGTGCCTTTTTTCTGCGTGCAGCGCTTGTCATGCATTAGCTCCCGACTAACTTACTGTGCTTCTGCAGGTACACGAAGGAAGGAACCATGAAGTTCGGGAACTTGTAAAAGCTGCTGGTCTAGAGGTTAGCATCTGACCTTCCTTAAGACACTTGTCCATTACTGTGATACTTTCCCACCATAGCCATATAAGATACAATTAAGTAATACTATTTCACTTTTTTCATAATACTTTCTTAATAATGATAACAATGAGAAGAAGAAGATGACGAAAAAACAATTTCATTGATGGTAGAAAGGGGGAAGCCCACTCCAAAGGAGTTGAAAAGAGGCTTTCTAATTGGAAATAAGGCCTTAATATTTTGATCAAGTCTATTCTGCCCTTGTCTTTTATTCATATAGCTTTTCAATTTTTCAGTACACTAAGCTTTATTTATTTATTATTTAAATAAGAAACCTGTAGATTTATTATTAGATAAAAGGAAACAATGGGGGCAGGGGGAGGAGGAATCCCCCACTCAGAGAAGGCTAATTACGGGAAAAAAATTCTTCCAATTGTGAAGGATCAGTGAAATTGGATAGTTACAAAGGAATTTTTGGTTGTATGGCACCACCGGAAAGCAAGGAGCTGTATATTACTACAAAAAATGCTATAACTAGAGGACTTGTCTTAAAAAATCCTGTTGTTTCTTTCCAGCCAACACCCCTGCATGAGTGTTCTTGAAGCAAAACCCCATCAGACTTTGGCTTCCATGTCTTTCAGTACATTAACAAATTAAAATTTATGTCTGATAGTGCTCGAATGATTTTTTCCATTTTGGGGAGGAATGAAGTATATTGTGGCTGGATGGCACTATAGGTTTTGCCTGGGAAATTTGGCTATAATATGGAGAAATTGGAAGGTTTTGCTTGGGAAATTTGGCCATAACAGGAAGGCTTTTGGGCACAAGTTTATGGAGAAATTGGAGGTGGAAAGTCTTGTGAACTCAATACCTTCGTTTGGGCTTCTGATTATTATTCATATATGATTATTGAAAACATAGATTTGGGTTTCATTAAATACCTGAACCTATTGGTACATTTTCAAACAACTCACTATTGCGTGATATATACCACCTGATTTGGAAGGGTCATCACCCTAAGAAGATAAAGTTTGTCATATCGTTATATGGGAGCTCTCTAAAAAAGCTATCAACACGGGACAAGCTTCAAAGAAGAATGCCTTACATGGCATTGTCGTCTCATTGGTGCTCTGTTTGCAAACAACAATTAGAACCACAGAGTCATCTTATAGTATCTTGTAAGTTTTCTAGGACCTTTTGGAACCATCTCTTTTCAACTTCTAATTGGCACACGGCTCTTCTGAAAGACCCTGAAACTCTCCTGAGTCCTATTCCATGTCCTTGGAGGCCAGCCTTTCCAAAAGGAAAGAAGCTTCTTCGAGAGAATTTTATTAGAGCATTCTGCTGGAACATTTGGCAAGAAAGGAATAGAAGAATCTTCTATGAAAAGGAACTCTTTTATTATAGATTTTTTTATGCTACAGTTAATACTCTTGTGACTTGGTGTAAATGCTCTCCCTTATTCCATCACTATACGTTTTTCTAGTCTCCCTTCAAATTAGAAATGTCTTTTGTAATCTCTCAATTGGGGCTTCCCCTTCTTTTGTAATCTCATACCATCAATGAAATTGTTTCTTATTCAAAAAAAGTTTCATTTTCTTTTTGGAGGGCATTGTTGTATCTTTTATGTCCTCGTTGGTATCTCTCTATTGTAGGCCTTTATTTTCTATGACCATGTTACTTCATGGAACATTTGTTTTGAACCTATAAATGTGAACATATATTTAATTACCTGTTGCGATTTTTTTTCTTCTTTACTTTTTGTCCCATTCATTCATTCATGATAGCCACATTAAATACTCGGACATGAGGAAACTGGGAATATGACATCAAGGGAGATACCTTTTTAATGCCATTTCAACTACTTGTTCTTGTTTGAGTTTGTCTGCAAGTTCCATTTGCATGTGTAATTTCTGGAATTTATTGAAACAGATCTATTCATTAAAGCGTGTAAGGATCGGTGGCTTCAGACTTCCATCAGATTTGGGGTAATTTCTTGTTATGATCACCTTTGATCTGTTTCTTTTATTTGTTGAACTTGTTATCGTTTGGGAATGGGCACAGAATCGGATTAGTTGATTCAATTGCAATTCGTTTTCTTTTTCACATAACAGAAACCAAGTAACAAAGGTAAATAATTTATTATGTTGCATGTAAGTATTCGGAAATGTTGGTGAATATAGTACGTGCCAGTATATTATAATTATGGTGATGTTATTAGATGTCAGAAGACTAACCAAATAAAAACGTATCTTTCAACTGAACAACGAAGATCTTAAAAGTTTATTCTTGAAGATAAATTGAAATAAAACAATTTTAATCTTGAAAATAAAATTTATCACAAATGATAATCAGGTGGATAAGGTTCATTCTCTGTCCTCAAATCTATCTCCAACAATTTCCTTTTTAACTTCGGTCAGAACCCTCAAGATTGTGCAACAAACTTCCCTTTTTCTCCCCTTCTTTTACAGTTTTTCGAGGTGAACCTAGAAAATGCTTCGAAGTTTTAGCTGGAACTTATTTGTGAACATGAGAATTCAGATAATGGGATGCCATGTAGGTTTATCGAAAATTTTCCGAATTGTTTCAGGCTTGGAAGTTACACTGAACTGAAACAAAGTGATCTAAAGGCAATTGGTTGGAAAAGTTGAGTTTCTGATGACTACAGAGCCGTCCATATTTGTTGAAGCTTGAATGTGGTAGGAGTGATTTCAGACATACCACATGCATGGAAGCACAGTACTACTTTCTAACTGCTGGGGCAGTATATGAACATTTGAAGAAGTTGGATACTGTTTATTCCAGCTCACGCTTCACACCATGGCCATTGATTATTTACAATTATGCTTGGGTTTGAAGATTTCAGTCAACATTGAAGGTGCAGGTCGTCAACCATCAAAATTTTATAGATAATATGAATGAAGTGCGATGCCATTCTATTATAGAATTACTTTCATCCCATTGTGTATTAAACTGAACAGTAAAGGAACATACAGGTAGTTGCAATGGCGCTTGTTAACGAGACCTTGTGTTTCTCTCTCCACATTGAAAGCGAGTGTGGGAGGGTATTCTAACACTGTGCCTTAATCCTGTATTCATTACTCATATATGACTTCACATTTAATTATATTCTTTTCTCAACTTCCTTTAGTCATCTTCTCTAGCTTACAACTTCTTCCAGCAGATGCAGAGGATCAACATTGCGCACAGATGAGGCTTCTGTATGAAGCTTCTTTTAGCAAGGAAACATCTTATATGGGTTGCAAGTTCAACATGCTCTGCCTTTGAAAGCTTGTATGTTGGTAGGTAAGAGCCTCTATTGACAATATCCTTTCATTTTGTTGTTTTAATCTCTTGCATCTATCCCCATAGAATACAACAATTAGTACGAATTTTCCCCGTGGCTAAATGGATCTACTTGTCATCCAATGAGTCGTCTGACTAGTTTTATGTTCAATATACCATGCTTCATTTGATTGAAACAAAGATTTGTAGTATTTGGATCATGTTAAACTAGAAAATTGAAAGAAGGGTGATTGAAAACAATACTTTTTTTTTTTTTTTGTGGGTGGGGGGGATAAGGACTCGAACTAGATGAACAGTATGGAAAAACTGCCTATAATTGTTCTACTCAGTCCTCCAATTCAACTTTATCAAGATCCATGTCCTATCTGAAATAACTTGAGATCTGGGAACATGGATTTTGTTCTAATTTCACAACTCCAAGAGCATAAACTAGCCTAGATCTTAGCCTTGCTAGCTTAACTTTCTATCGAGTCCTGCAAGCTTCAATTTTATTAAGATCTATGTAGTATCTGAAATAACTTGAGATCTGGGAACATGGTTTTTGTCCAAATTCCAGCTTGCACCGACTACAAAACTGCCATCTCTTGTCAGCAAAATGAAGCAACAAAAAACAAACGGACAGCAGAGCCTCTCTTGTTGTACAGTACCACCGGAATCGTCCTTTGGACTGACAAAATGGATATTATACAATGGGATTTTGGCACAACCATCAACTCAAACTCCCAGAGGTACGAGGTTTGGTAATTCATTTTAACCCTCTCCGGGTTTTAACTTTTTTGGTGAGACTAAAAAGTTGGGAGATTTTCAAAAATAGAAAAATAAGAAATCTTATCAGTGGTAGAAATTAATAGAAGTTTATTAGTGTTTATTAGTGTATCAGTGTTTTTTTACTACTTTTATAAATAGTTTGACATTTTTTCTATCTATAAAAATTTTCCAAAAATGTTATGTAGCAAAATGAATGGCTATGGTAATCAGTTTGATGATATTGACTATAGGTCTGCTTGATAATCCTTTTCTGAATTATAACAACACGTGAGGGAAACAATTGAGTTATTCTCAAGATGTAGGTCCGCTTGATCTAA

mRNA sequence

ATGGTTTCATTAGCATCTTCTTCACTCTCATTTCTCTCAAAACCTTCCTTCATCCTCAACCCCATTCGCGCCATTCCTCGCATTTCATGTTCGCTTTCCTCCAATTCCACTCCCAACGCCTCATCTTCGTCTTCATCTTCATTGGAGTTCAACATCACCTTCGCTCCCCCTAAACCGAAGCCTAAATCCGAAGTTGAAGGTCCTTTTCAGTTCATCGATCGAAACACTGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGCAACCTCAAACTCCAATCACATCCTCCTACACGGTTCCTTCATTCCATGTCGGAGGATGAAACCAAGCCCAAGAAGAAGAAGGTTTCTGCTGATAAACGGCCAACCGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGATTTTACAATGAGAATATTAGGGACGCGTCGCAACGTCTCAGTAAAGTTCTTGCTGCCGCTGGAGTGGCATCAAGACGGAGCAGTGAAGAGCTTATTTTTGAAGGTCGTGTGACTGTTAATGGTTCTGTTTGCAATACTCCTCAGACTCGGGTGGATCCTGCAAGAGATGTTATTTACGTGAATGGAAATAGGCTTCCTAAGAAACTACCACAAAAAGTTTATCTAGCTCTGAATAAGCCAAAAGGGTATATTTGTTCGTCTGGAAAAAAGGAGTCGAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGATAAAACATATCCAGGACAACCCAAACCACGGCTGTTCACAGTTGGCAGACTTGATGTTGCAACAACTGGGTTGATTCTCGTGACAAATGATGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAATACATTGCAGCGATAGATGGTGCTGTTAGTAAGCAGAACCTGATAGCAATCAGTGAGGGAACAATAATTGATGGCATCCATTGCACACCGGATTCTGTGGAGTTACTACCACGACAGCCAGATATATCAAGGCCTCGTCTGCGTATCGTGGTACACGAAGGAAGGAACCATGAAGTTCGGGAACTTGTAAAAGCTGCTGGTCTAGAGATCTATTCATTAAAGCGTGTAAGGATCGGTGGCTTCAGACTTCCATCAGATTTGGGAAACCAAGTAACAAAGTACGTGCCAGTATATTATAATTATGGTGATGTTATTAGATTTTTTCGAGCTTGTATGTTGGTAGCTTGCACCGACTACAAAACTGCCATCTCTTGTCAGCAAAATGAAGCAACAAAAAACAAACGGACAGCAGAGCCTCTCTTGTTGTACAGTACCACCGGAATCGTCCTTTGGACTGACAAAATGGATATTATACAATGGGATTTTGGCACAACCATCAACTCAAACTCCCAGAGGTACGAGGTCCGCTTGATCTAA

Coding sequence (CDS)

ATGGTTTCATTAGCATCTTCTTCACTCTCATTTCTCTCAAAACCTTCCTTCATCCTCAACCCCATTCGCGCCATTCCTCGCATTTCATGTTCGCTTTCCTCCAATTCCACTCCCAACGCCTCATCTTCGTCTTCATCTTCATTGGAGTTCAACATCACCTTCGCTCCCCCTAAACCGAAGCCTAAATCCGAAGTTGAAGGTCCTTTTCAGTTCATCGATCGAAACACTGGCGGTCAGCTCTTCATTCCGTGGATAGTTCGCGGCGAAGATGGCAACCTCAAACTCCAATCACATCCTCCTACACGGTTCCTTCATTCCATGTCGGAGGATGAAACCAAGCCCAAGAAGAAGAAGGTTTCTGCTGATAAACGGCCAACCGAACCCCCTAAGCATTCGAAGGCTGCGCGAAGATTTTACAATGAGAATATTAGGGACGCGTCGCAACGTCTCAGTAAAGTTCTTGCTGCCGCTGGAGTGGCATCAAGACGGAGCAGTGAAGAGCTTATTTTTGAAGGTCGTGTGACTGTTAATGGTTCTGTTTGCAATACTCCTCAGACTCGGGTGGATCCTGCAAGAGATGTTATTTACGTGAATGGAAATAGGCTTCCTAAGAAACTACCACAAAAAGTTTATCTAGCTCTGAATAAGCCAAAAGGGTATATTTGTTCGTCTGGAAAAAAGGAGTCGAAGTCTGTGATAAGTCTATTTGATGATTATTTGAAGAGTTGGGATAAAACATATCCAGGACAACCCAAACCACGGCTGTTCACAGTTGGCAGACTTGATGTTGCAACAACTGGGTTGATTCTCGTGACAAATGATGGAGATTTTGCTCAAAGTATCTCACATCCTTCATCTGGTTTATCGAAGGAATACATTGCAGCGATAGATGGTGCTGTTAGTAAGCAGAACCTGATAGCAATCAGTGAGGGAACAATAATTGATGGCATCCATTGCACACCGGATTCTGTGGAGTTACTACCACGACAGCCAGATATATCAAGGCCTCGTCTGCGTATCGTGGTACACGAAGGAAGGAACCATGAAGTTCGGGAACTTGTAAAAGCTGCTGGTCTAGAGATCTATTCATTAAAGCGTGTAAGGATCGGTGGCTTCAGACTTCCATCAGATTTGGGAAACCAAGTAACAAAGTACGTGCCAGTATATTATAATTATGGTGATGTTATTAGATTTTTTCGAGCTTGTATGTTGGTAGCTTGCACCGACTACAAAACTGCCATCTCTTGTCAGCAAAATGAAGCAACAAAAAACAAACGGACAGCAGAGCCTCTCTTGTTGTACAGTACCACCGGAATCGTCCTTTGGACTGACAAAATGGATATTATACAATGGGATTTTGGCACAACCATCAACTCAAACTCCCAGAGGTACGAGGTCCGCTTGATCTAA

Protein sequence

MVSLASSSLSFLSKPSFILNPIRAIPRISCSLSSNSTPNASSSSSSSLEFNITFAPPKPKPKSEVEGPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVSADKRPTEPPKHSKAARRFYNENIRDASQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDPARDVIYVNGNRLPKKLPQKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLILVTNDGDFAQSISHPSSGLSKEYIAAIDGAVSKQNLIAISEGTIIDGIHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRLPSDLGNQVTKYVPVYYNYGDVIRFFRACMLVACTDYKTAISCQQNEATKNKRTAEPLLLYSTTGIVLWTDKMDIIQWDFGTTINSNSQRYEVRLI

Homology

[Close]

BLAST of Bhi04G001067 vs. TAIR 10
Match: AT2G39140.1 (pseudouridine synthase family protein )

HSP 1 Score: 478.8 bits (1231), Expect = 5.0e-135
Identity = 261/406 (64.29%), Postives = 302/406 (74.38%), Query Frame = 0


Query: 1   MVSLASSS-----LSFLSKPSFILNP-IRAIPRISCSLSSNSTPNASSSSSSSLEFNITF 60
           M S+A+SS      SFL   +F L+P    I  + CS+        SSSSS  +EF+I+F
Sbjct: 1   MASVAASSSISFAASFLKIKAFPLSPRFFPIRTLRCSV--------SSSSSEPIEFDISF 60

Query: 61  APPKPKPKSEVEGPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDET-- 120
           APPKPKP S   G        T  QLFIPWIVR +DG LKLQS PP R +H+++ D T  
Sbjct: 61  APPKPKPSSTHGGV-------TPQQLFIPWIVRSDDGTLKLQSQPPARLIHNLAIDATTQ 120

Query: 121 KPKKKKVSADKRPTE-------------------PPKHSKAARRFYNENIRDASQRLSKV 180
            PKKK  S  K+P                      PK SKAARRFYNEN ++  QRLSKV
Sbjct: 121 NPKKKDKSKKKQPQATSSSSATTTASSPASHSEVKPKLSKAARRFYNENFKEQPQRLSKV 180

Query: 181 LAAAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDPARDVIYVNGNRLPKKLPQKVYLA 240
           LAAAGVASRR+SEELIF+G+VTVNG +CNTPQTRVDP+RD+IYVNGNR+PKKLP KVY A
Sbjct: 181 LAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFA 240

Query: 241 LNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLILVTN 300
           LNKPKGYICSSG+KE KS ISLFD+YL SWDK  PG PKPRLFTVGRLDVATTGLI+VTN
Sbjct: 241 LNKPKGYICSSGEKEIKSAISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTN 300

Query: 301 DGDFAQSISHPSSGLSKEYIAAIDGAVSKQNLIAISEGTIIDGIHCTPDSVELLPRQPDI 360
           DGDFAQ +SHPSS L KEYI  + G + K++L+AISEGT+++G+HC PDSVEL+P+Q DI
Sbjct: 301 DGDFAQKLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTMVEGVHCVPDSVELMPKQHDI 360

Query: 361 SRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRLPSDLG 380
            R RLRIVVHEGRNHEVRELVK AGLE++SLKRVRIGGFRLPSDLG
Sbjct: 361 PRARLRIVVHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLG 391

[Close]

BLAST of Bhi04G001067 vs. TAIR 10
Match: AT3G43340.1 (Pseudouridine synthase family protein )

HSP 1 Score: 118.2 bits (295), Expect = 1.7e-26
Identity = 57/74 (77.03%), Postives = 64/74 (86.49%), Query Frame = 0


Query: 306 IAISEGTIIDGIHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLK 365
           +AISEGT+++GIHC PD VEL+P+Q DI R  LRIVVHEGRNHEVRELVK  GLE+ SLK
Sbjct: 1   MAISEGTMVEGIHCVPDLVELMPKQHDIPRAWLRIVVHEGRNHEVRELVKNVGLEVDSLK 60

Query: 366 RVRIGGFRLPSDLG 380
           RVRIGG RLPSDLG
Sbjct: 61  RVRIGGVRLPSDLG 74

[Close]

BLAST of Bhi04G001067 vs. ExPASy Swiss-Prot
Match: Q8L960 (Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SVR1 PE=1 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 7.1e-134
Identity = 261/406 (64.29%), Postives = 302/406 (74.38%), Query Frame = 0


Query: 1   MVSLASSS-----LSFLSKPSFILNP-IRAIPRISCSLSSNSTPNASSSSSSSLEFNITF 60
           M S+A+SS      SFL   +F L+P    I  + CS+        SSSSS  +EF+I+F
Sbjct: 1   MASVAASSSISFAASFLKIKAFPLSPRFFPIRTLRCSV--------SSSSSEPIEFDISF 60

Query: 61  APPKPKPKSEVEGPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDET-- 120
           APPKPKP S   G        T  QLFIPWIVR +DG LKLQS PP R +H+++ D T  
Sbjct: 61  APPKPKPSSTHGGV-------TPQQLFIPWIVRSDDGTLKLQSQPPARLIHNLAIDATTQ 120

Query: 121 KPKKKKVSADKRPTE-------------------PPKHSKAARRFYNENIRDASQRLSKV 180
            PKKK  S  K+P                      PK SKAARRFYNEN ++  QRLSKV
Sbjct: 121 NPKKKDKSKKKQPQATSSSSATTTASSPASHSEVKPKLSKAARRFYNENFKEQPQRLSKV 180

Query: 181 LAAAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDPARDVIYVNGNRLPKKLPQKVYLA 240
           LAAAGVASRR+SEELIF+G+VTVNG +CNTPQTRVDP+RD+IYVNGNR+PKKLP KVY A
Sbjct: 181 LAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFA 240

Query: 241 LNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGLILVTN 300
           LNKPKGYICSSG+KE KS ISLFD+YL SWDK  PG PKPRLFTVGRLDVATTGLI+VTN
Sbjct: 241 LNKPKGYICSSGEKEIKSAISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTN 300

Query: 301 DGDFAQSISHPSSGLSKEYIAAIDGAVSKQNLIAISEGTIIDGIHCTPDSVELLPRQPDI 360
           DGDFAQ +SHPSS L KEYI  + G + K++L+AISEGT+++G+HC PDSVEL+P+Q DI
Sbjct: 301 DGDFAQKLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTMVEGVHCVPDSVELMPKQHDI 360

Query: 361 SRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRLPSDLG 380
            R RLRIVVHEGRNHEVRELVK AGLE++SLKRVRIGGFRLPSDLG
Sbjct: 361 PRARLRIVVHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLG 391

[Close]

BLAST of Bhi04G001067 vs. ExPASy Swiss-Prot
Match: O67444 (Uncharacterized RNA pseudouridine synthase aq_1464 OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_1464 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.9e-31
Identity = 83/228 (36.40%), Postives = 126/228 (55.26%), Query Frame = 0


Query: 149 RLSKVLAAAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDPARDVIYVNGNRLPKKLPQ 208
           R++K L+ AGVASRR +E+LI EGRV VNG V  +   +V+P  D++ V+G   P K  +
Sbjct: 5   RINKFLSEAGVASRRKAEKLILEGRVKVNGEVVRSLGVKVNPEVDIVEVDGK--PVKPQR 64

Query: 209 KVYLALNKPKGYICSSGKKES--KSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATT 268
           K Y+ LNKP  Y+   G+     K++  L  D               R+F VGRLD  T 
Sbjct: 65  KRYIILNKPCCYLTQLGRSPDGRKTIEELIKDI------------PERVFPVGRLDYNTE 124

Query: 269 GLILVTNDGDFAQSISHPSSGLSKEYIAAIDGAVSKQNLIAISEGTIIDGIHCTPDSVEL 328
           GL+++TNDG+ A  I HP   L K Y+A ++G V ++ L  + +G  ++     PD++ +
Sbjct: 125 GLLILTNDGELANRILHPRYKLPKVYLALVEGKVDQKTLKRMKQGIELEDGFAKPDNIRI 184

Query: 329 LPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRL 375
           +  + +     L I  HEGR H V+  + A G ++  LKR+ IG  +L
Sbjct: 185 V--RYEGKNTLLEITFHEGRKHLVKRFLGAFGHKVKRLKRIAIGPIKL 216

[Close]

BLAST of Bhi04G001067 vs. ExPASy Swiss-Prot
Match: P35159 (Ribosomal large subunit pseudouridine synthase B OS=Bacillus subtilis (strain 168) OX=224308 GN=rluB PE=1 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 3.3e-30
Identity = 80/219 (36.53%), Postives = 123/219 (56.16%), Query Frame = 0


Query: 148 QRLSKVLAAAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDPARDVIYVNGNRLPKKLP 207
           +RL KV+A AGVASRR +EELI EG+V VNG V      +V    D I VNG ++ ++ P
Sbjct: 2   ERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVVTELGVKV-TGSDQIEVNGLKVEREEP 61

Query: 208 QKVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTG 267
             VY  L KP+G I ++   + + V++   D+ K+  +        R++ +GRLD  T+G
Sbjct: 62  --VYFLLYKPRGVISAAQDDKGRKVVT---DFFKNIPQ--------RIYPIGRLDYDTSG 121

Query: 268 LILVTNDGDFAQSISHPSSGLSKEYIAAIDGAVSKQNLIAISEGTIIDGIHCTPDSVELL 327
           L+L+TNDG+FA  + HP   + K Y+A + G   K+ L  +  G  ++     P   +LL
Sbjct: 122 LLLLTNDGEFANKLMHPKYEIDKTYVAKVKGIPPKELLRKLERGIRLEEGKTAPAKAKLL 181

Query: 328 PRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKR 367
                     +++ +HEGRN +VR + +A G E+  LKR
Sbjct: 182 SLDKKKQTSIIQLTIHEGRNRQVRRMFEAIGHEVIKLKR 206

[Close]

BLAST of Bhi04G001067 vs. ExPASy Swiss-Prot
Match: O05668 (Uncharacterized RNA pseudouridine synthase ML1370 OS=Mycobacterium leprae (strain TN) OX=272631 GN=ML1370 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 9.5e-30
Identity = 88/227 (38.77%), Postives = 123/227 (54.19%), Query Frame = 0


Query: 149 RLSKVLAAAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDPARDVIYVNGNRLPKKLPQ 208
           RL K+L+ AG+ASRR++E+LI EGRV V+G +     TRVDP   V+ V+G ++      
Sbjct: 17  RLQKILSRAGIASRRAAEKLIIEGRVEVDGQLVRELGTRVDPDVSVVRVDGVKVVVD-DS 76

Query: 209 KVYLALNKPKG-YICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTG 268
            VYLALNKP+G Y   S  +    V  L +  ++            +LF VGRLD  T G
Sbjct: 77  LVYLALNKPRGMYSTMSDDRGRPCVGDLIERRVRG---------NKKLFHVGRLDADTEG 136

Query: 269 LILVTNDGDFAQSISHPSSGLSKEYIAAIDGAVSKQNLIAISEGTIIDGIHCTPDSVELL 328
           LIL+TNDG+ A  + HPS  +SK Y+A + GAV +     +S G  +D      D   ++
Sbjct: 137 LILLTNDGELAHRLMHPSHEVSKTYLATVKGAVPRGLGKKLSVGLELDDGPAHVDDFAVV 196

Query: 329 PRQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRL 375
              P   +  +R+ +HEGR   VR L+ AAG  +  L R  IG   L
Sbjct: 197 DAIP--GKTLVRLTLHEGRKRIVRRLLTAAGFPVEMLVRTDIGAVSL 231

[Close]

BLAST of Bhi04G001067 vs. ExPASy Swiss-Prot
Match: P9WHQ0 (Uncharacterized RNA pseudouridine synthase MT1751.1 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT1751.1 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.1e-28
Identity = 86/226 (38.05%), Postives = 123/226 (54.42%), Query Frame = 0


Query: 149 RLSKVLAAAGVASRRSSEELIFEGRVTVNGSVCNTPQTRVDPARDVIYVNGNRLPKKLPQ 208
           RL KVL+ AG+ASRR++E++I +GRV V+G V     TRVDP   V+ V+G R+      
Sbjct: 15  RLQKVLSQAGIASRRAAEKMIVDGRVEVDGHVVTELGTRVDPQVAVVRVDGARVVLD-DS 74

Query: 209 KVYLALNKPKGYICSSGKKESKSVISLFDDYLKSWDKTYPGQPKPRLFTVGRLDVATTGL 268
            VYLALNKP+G   +      +  I    D +   ++   G  K  LF VGRLD  T GL
Sbjct: 75  LVYLALNKPRGMHSTMSDDRGRPCIG---DLI---ERKVRGTKK--LFHVGRLDADTEGL 134

Query: 269 ILVTNDGDFAQSISHPSSGLSKEYIAAIDGAVSKQNLIAISEGTIIDGIHCTPDSVELLP 328
           +L+TNDG+ A  + HPS  + K Y+A + G+V +     +  G  +D      D   ++ 
Sbjct: 135 MLLTNDGELAHRLMHPSHEVPKTYLATVTGSVPRGLGRTLRAGIELDDGPAFVDDFAVVD 194

Query: 329 RQPDISRPRLRIVVHEGRNHEVRELVKAAGLEIYSLKRVRIGGFRL 375
             P   +  +R+ +HEGRN  VR L+ AAG  + +L R  IG   L
Sbjct: 195 AIP--GKTLVRVTLHEGRNRIVRRLLAAAGFPVEALVRTDIGAVSL 229

[Close]

BLAST of Bhi04G001067 vs. ExPASy TrEMBL
Match: A0A1S3C3I9 (uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496448 PE=3 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 3.6e-197
Identity = 358/379 (94.46%), Postives = 365/379 (96.31%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSFILNPIRAIPRISCSLSSNSTPNASSSSSSSLEFNITFAPPKPK 60
           MVSLASSSLSFLSKPS I N IRAIPRISCSLSSNSTPNA  SSSSS EFNITFAPPKPK
Sbjct: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNA--SSSSSFEFNITFAPPKPK 60

Query: 61  PKSEVEGPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS+VE PFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS
Sbjct: 61  PKSDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120

Query: 121 ADKRPTEPPKHSKAARRFYNENIRDASQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180
           A K  TEPPKHSKAARRFYNENIR++SQRLSKVLAAAGVASRRSSEELIF GRVTVNGSV
Sbjct: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDVIYVNGNRLPKKLPQKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARD+IYVNGNRLPKKLP KVYLALNKPKGYICSSGKKESKSVISLFDDYL
Sbjct: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLILVTNDGDFAQSISHPSSGLSKEYIAAIDGAV 300
           KSWDKTYPGQPKPRLFTVGRLDVATTGLI+VTNDGDFAQSISHPSSGLSKEYIAAIDG V
Sbjct: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDV 300

Query: 301 SKQNLIAISEGTIIDGIHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLIAISEGT IDG+HCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGFRLPSDLG 380
           IYSLKRVRIGG+RLPSDLG
Sbjct: 361 IYSLKRVRIGGYRLPSDLG 377

[Close]

BLAST of Bhi04G001067 vs. ExPASy TrEMBL
Match: A0A1S4E166 (ribosomal large subunit pseudouridine synthase B isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496448 PE=3 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 3.6e-197
Identity = 358/379 (94.46%), Postives = 365/379 (96.31%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSFILNPIRAIPRISCSLSSNSTPNASSSSSSSLEFNITFAPPKPK 60
           MVSLASSSLSFLSKPS I N IRAIPRISCSLSSNSTPNA  SSSSS EFNITFAPPKPK
Sbjct: 1   MVSLASSSLSFLSKPSLIFNRIRAIPRISCSLSSNSTPNA--SSSSSFEFNITFAPPKPK 60

Query: 61  PKSEVEGPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS+VE PFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS
Sbjct: 61  PKSDVEDPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120

Query: 121 ADKRPTEPPKHSKAARRFYNENIRDASQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180
           A K  TEPPKHSKAARRFYNENIR++SQRLSKVLAAAGVASRRSSEELIF GRVTVNGSV
Sbjct: 121 AGKPITEPPKHSKAARRFYNENIRESSQRLSKVLAAAGVASRRSSEELIFGGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDVIYVNGNRLPKKLPQKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARD+IYVNGNRLPKKLP KVYLALNKPKGYICSSGKKESKSVISLFDDYL
Sbjct: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLILVTNDGDFAQSISHPSSGLSKEYIAAIDGAV 300
           KSWDKTYPGQPKPRLFTVGRLDVATTGLI+VTNDGDFAQSISHPSSGLSKEYIAAIDG V
Sbjct: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAIDGDV 300

Query: 301 SKQNLIAISEGTIIDGIHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLIAISEGT IDG+HCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLIAISEGTTIDGVHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGFRLPSDLG 380
           IYSLKRVRIGG+RLPSDLG
Sbjct: 361 IYSLKRVRIGGYRLPSDLG 377

[Close]

BLAST of Bhi04G001067 vs. ExPASy TrEMBL
Match: A0A6J1BVE6 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006060 PE=3 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 4.5e-192
Identity = 353/382 (92.41%), Postives = 363/382 (95.03%), Query Frame = 0


Query: 1   MVSLAS--SSLSFLSKPSFILNPIRAIPRISCSLSSNSTPNASSSSSSSLEFNITFAPPK 60
           M SLA+  SSLS LSKPSFILNPIRAIPRISCSLSSNS PNA  SSSS LEFNITFAPPK
Sbjct: 1   MASLAAALSSLSILSKPSFILNPIRAIPRISCSLSSNSAPNA--SSSSPLEFNITFAPPK 60

Query: 61  PKPKSEVEGPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKK 120
           PKPKSE++ PFQFID NTGGQL IPWIVRGEDGNL+LQSHPPTRFL SMSE ETKP++KK
Sbjct: 61  PKPKSEIQHPFQFIDPNTGGQLLIPWIVRGEDGNLQLQSHPPTRFLQSMSEAETKPRRKK 120

Query: 121 VSADKR-PTEPPKHSKAARRFYNENIRDASQRLSKVLAAAGVASRRSSEELIFEGRVTVN 180
            SADKR P  PPKHSKAARRFYNENIRD+SQRLSKVLAAAGVASRRSSEELIFEGRVTVN
Sbjct: 121 GSADKRVPEPPPKHSKAARRFYNENIRDSSQRLSKVLAAAGVASRRSSEELIFEGRVTVN 180

Query: 181 GSVCNTPQTRVDPARDVIYVNGNRLPKKLPQKVYLALNKPKGYICSSGKKESKSVISLFD 240
           GSVCNTPQTRVDPARDVIYVNGNRLPKKLP KVYLALNKPKGYICSSGKKESKSVISLFD
Sbjct: 181 GSVCNTPQTRVDPARDVIYVNGNRLPKKLPPKVYLALNKPKGYICSSGKKESKSVISLFD 240

Query: 241 DYLKSWDKTYPGQPKPRLFTVGRLDVATTGLILVTNDGDFAQSISHPSSGLSKEYIAAID 300
           DYLKSWDKTYPGQPKPRLFTVGRLDVATTGLI+VTNDGDFAQSISHPSSGLSKEYIAAID
Sbjct: 241 DYLKSWDKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGLSKEYIAAID 300

Query: 301 GAVSKQNLIAISEGTIIDGIHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAA 360
           GAVSKQNLIAISEGTIIDG+HCTPDSVELLPRQPD+SR RLRIVVHEGRNHEVRELVKAA
Sbjct: 301 GAVSKQNLIAISEGTIIDGVHCTPDSVELLPRQPDVSRSRLRIVVHEGRNHEVRELVKAA 360

Query: 361 GLEIYSLKRVRIGGFRLPSDLG 380
           GLEIYSLKRVRIGGFRLPSDLG
Sbjct: 361 GLEIYSLKRVRIGGFRLPSDLG 380

[Close]

BLAST of Bhi04G001067 vs. ExPASy TrEMBL
Match: A0A6J1GVH4 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111457913 PE=3 SV=1)

HSP 1 Score: 677.6 bits (1747), Expect = 3.8e-191
Identity = 344/379 (90.77%), Postives = 358/379 (94.46%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSFILNPIRAIPRISCSLSSNSTPNASSSSSSSLEFNITFAPPKPK 60
           MVSLA+SSLS LSKPS ILNPIRAI RISCSLSSNS PN SSSSSSSLEFNITFAPP PK
Sbjct: 1   MVSLAASSLSVLSKPSLILNPIRAISRISCSLSSNSAPNGSSSSSSSLEFNITFAPPTPK 60

Query: 61  PKSEVEGPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS+ +  FQFID+NTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSE E KPKKKKVS
Sbjct: 61  PKSKTDDSFQFIDQNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEAEAKPKKKKVS 120

Query: 121 ADKRPTEPPKHSKAARRFYNENIRDASQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180
            DKR  EPPK+SKAARRFYNENIRD+SQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV
Sbjct: 121 VDKRVPEPPKYSKAARRFYNENIRDSSQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDVIYVNGNRLPKKLPQKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARD+IYVNGNRLPKKLP KVYLALNKPKGYICSSGKKESKSVI+LFDDYL
Sbjct: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPSKVYLALNKPKGYICSSGKKESKSVINLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLILVTNDGDFAQSISHPSSGLSKEYIAAIDGAV 300
           KSW KTYPGQPKPRLFTVGRLDVATTGLI+VTNDGDFAQSISHPSSG+SKEYIAAIDGAV
Sbjct: 241 KSWHKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGISKEYIAAIDGAV 300

Query: 301 SKQNLIAISEGTIIDGIHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLI ISEGT+IDG+HC PD+VELLP+QPDI R RLRI VHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLITISEGTVIDGVHCIPDAVELLPQQPDIPRSRLRITVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGFRLPSDLG 380
           IYSLKRVRIGGFRLPSDLG
Sbjct: 361 IYSLKRVRIGGFRLPSDLG 379

[Close]

BLAST of Bhi04G001067 vs. ExPASy TrEMBL
Match: A0A6J1JT41 (putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111487252 PE=3 SV=1)

HSP 1 Score: 676.8 bits (1745), Expect = 6.6e-191
Identity = 343/379 (90.50%), Postives = 358/379 (94.46%), Query Frame = 0


Query: 1   MVSLASSSLSFLSKPSFILNPIRAIPRISCSLSSNSTPNASSSSSSSLEFNITFAPPKPK 60
           MVSLA+SSLS LSKPS ILNPIRAI RISCSLSSNS PN SSSSSSS+EFNITFAPP PK
Sbjct: 1   MVSLAASSLSVLSKPSLILNPIRAISRISCSLSSNSAPNGSSSSSSSMEFNITFAPPTPK 60

Query: 61  PKSEVEGPFQFIDRNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEDETKPKKKKVS 120
           PKS+ +  FQFID+NTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSE E KPKKKKVS
Sbjct: 61  PKSKTDDSFQFIDQNTGGQLFIPWIVRGEDGNLKLQSHPPTRFLHSMSEAEAKPKKKKVS 120

Query: 121 ADKRPTEPPKHSKAARRFYNENIRDASQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180
            DKR  EPPK+SKAARRFYNENIRD+SQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV
Sbjct: 121 VDKRVPEPPKYSKAARRFYNENIRDSSQRLSKVLAAAGVASRRSSEELIFEGRVTVNGSV 180

Query: 181 CNTPQTRVDPARDVIYVNGNRLPKKLPQKVYLALNKPKGYICSSGKKESKSVISLFDDYL 240
           CNTPQTRVDPARD+IYVNGNRLPKKLP KVYLALNKPKGYICSSGKKESKSVI+LFDDYL
Sbjct: 181 CNTPQTRVDPARDIIYVNGNRLPKKLPSKVYLALNKPKGYICSSGKKESKSVINLFDDYL 240

Query: 241 KSWDKTYPGQPKPRLFTVGRLDVATTGLILVTNDGDFAQSISHPSSGLSKEYIAAIDGAV 300
           KSW KTYPGQPKPRLFTVGRLDVATTGLI+VTNDGDFAQSISHPSSG+SKEYIAAIDGAV
Sbjct: 241 KSWHKTYPGQPKPRLFTVGRLDVATTGLIIVTNDGDFAQSISHPSSGISKEYIAAIDGAV 300

Query: 301 SKQNLIAISEGTIIDGIHCTPDSVELLPRQPDISRPRLRIVVHEGRNHEVRELVKAAGLE 360
           SKQNLI ISEGT+IDG+HC PD+VELLP+QPDI R RLRI VHEGRNHEVRELVKAAGLE
Sbjct: 301 SKQNLITISEGTVIDGVHCIPDAVELLPQQPDIPRSRLRITVHEGRNHEVRELVKAAGLE 360

Query: 361 IYSLKRVRIGGFRLPSDLG 380
           IYSLKRVRIGGFRLPSDLG
Sbjct: 361 IYSLKRVRIGGFRLPSDLG 379

The following BLAST results are available for this feature:

BLAST of Bhi04G001067 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39140.1	5.0e-135	64.29	pseudouridine synthase family protein	[more]
AT3G43340.1	1.7e-26	77.03	Pseudouridine synthase family protein	[more]

BLAST of Bhi04G001067 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L960	7.1e-134	64.29	Putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=A...	[more]
O67444	3.9e-31	36.40	Uncharacterized RNA pseudouridine synthase aq_1464 OS=Aquifex aeolicus (strain V...	[more]
P35159	3.3e-30	36.53	Ribosomal large subunit pseudouridine synthase B OS=Bacillus subtilis (strain 16...	[more]
O05668	9.5e-30	38.77	Uncharacterized RNA pseudouridine synthase ML1370 OS=Mycobacterium leprae (strai...	[more]
P9WHQ0	1.1e-28	38.05	Uncharacterized RNA pseudouridine synthase MT1751.1 OS=Mycobacterium tuberculosi...	[more]

BLAST of Bhi04G001067 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3I9	3.6e-197	94.46	uncharacterized RNA pseudouridine synthase aq_1464 isoform X1 OS=Cucumis melo OX...	[more]
A0A1S4E166	3.6e-197	94.46	ribosomal large subunit pseudouridine synthase B isoform X2 OS=Cucumis melo OX=3...	[more]
A0A6J1BVE6	4.5e-192	92.41	putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=M...	[more]
A0A6J1GVH4	3.8e-191	90.77	putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=C...	[more]
A0A6J1JT41	6.6e-191	90.50	putative ribosomal large subunit pseudouridine synthase SVR1, chloroplastic OS=C...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 148..207 e-value: 2.8E-14 score: 63.4
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 148..190 e-value: 4.6E-11 score: 42.3
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 148..215 e-value: 1.31831E-10 score: 55.3334
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 144..204 e-value: 7.4E-19 score: 68.8
IPR042092	Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain	GENE3D	3.30.70.1560		coord: 288..373 e-value: 4.6E-43 score: 148.6
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 211..379 e-value: 4.6E-43 score: 148.6
IPR006145	Pseudouridine synthase, RsuA/RluA-like	PFAM	PF00849	PseudoU_synth_2	coord: 211..351 e-value: 2.9E-15 score: 56.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..135
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..135
None	No IPR available	PANTHER	PTHR47683	PSEUDOURIDINE SYNTHASE FAMILY PROTEIN-RELATED	coord: 39..381
None	No IPR available	PROSITE	PS50889	S4	coord: 148..217 score: 14.38512
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 117..230
IPR018496	Pseudouridine synthase, RsuA/RluB/E/F, conserved site	PROSITE	PS01149	PSI_RSU	coord: 259..273
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 209..381

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001067	Bhi04M001067	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000488	maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process	GO:0000489	maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)
biological_process	GO:0032544	plastid translation
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0009982	pseudouridine synthase activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0016866	intramolecular transferase activity