Bhi04G001022 (gene) Wax gourd (B227) v1

Overview


Name	Bhi04G001022
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	RING-type domain-containing protein
Location	chr4: 32614722 .. 32620181 (+)
RNA-Seq Expression	Bhi04G001022
Synteny	Bhi04G001022

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAATAATGATTTCTATTAATGTCTGAAGTGATTTGTTTCTTCGTTTTTAAATATATATAAGAAGATTCCATTTTCCTACACTACTTTGTATTTCAATTCCACTCTCCCAGTGATTCCAGTTTAGCTGATATTGGTGGGGTTTTTTTCTTTTCTCTAAATGGGTTCTCTGCTTTTCTGTTTTTGCCAATTCCCAATTCCTCCACCATGTATTCAATCTTTTTCTCTGGGATTTTTGCACTCTCTCCCACAATAAAACAGTCACTATCTGATATCGACACCCACCAGTTGATTAAACTTTAGTAAGTTTCCCACTTCCGTGCAAATTAATTCAAAATTTTAGCTTCTTTTTGCCTTTCCCCATTTGGGTTGTAGCGTTTTCCTGAAATGATTCATCATGAGAATCGAATTCCGTTCTAGTTTTGGGTTGAATGGGATTGGAATTCCTTCCGATGTTGAAGCTGCCGAAGTTAGCACGATTTCAATAGAAGACACTGTTGAATTGTAGAAACTGTTTTCACTGGGGAATTTAGAGTTTCGATTGGTGGAGAACGGAAATTTCGAGTAGAGGAGAAGAGGGTATTTGGAGAATGATGTCTTCGGGGGTGAATTTGGTGATGACAGTGATTGGGTTCACTGTGAGTACTTTGTTCATCGTATTCGTCTGTACAAGGCTTGTTTGTGCTAGGATTCATCTCAATGCTTCAAGGCGCTCCTTTCCAATCGCTTCTAGATCCGATCTCAGTGGGGTGAGCTTGTTTCTCTCTTATTTAATTTGCTTCCAGATTTGATGTGGATATATGTATTTTAATTTTCTACTGGTTATTTGTTTATGTTAGTCGCCAAGCAAAGATTGGATAATTTCCCTTCTTCTTCTTCTCCCTTTTTGTTCCCTTTCTGGGTTTAGTTTTGTATGCTAATTTATATGCAAAGTGGATATGATTATCTGCATTATAGTTATTCTTGCATTTCTGCCATTTTAATGAAGTTTCAGCATTCATTTCATGCAGTGGTATTACCTCCCCCCCCCCCCTCCTTTTTGCTCTCTCTTTTTGGTCTGCTGGGTCAGTTTCATAGGTCTGCTAATGCGTTTTCTTGGTAGCCTTTTTGCAATGTCGCTTTTAATCAAATACTAATGGATTGGGAGTCTCCACAGAAACAAAAAGGGTCTCTGACAAAATGAACGTAGCTCAACTGCCATGAAATATGTACTATCTTTCTCGATGTTAGAGGTTCAATCCCCATGCCCACATATTGTAAAAAAAAAAAAAGTTACAAAAGGGTATCTTATACTGGATTCTTGTTTGTTCTCATAGGCAGTGCTTGTGCATTTTTATTTCACATTGGTATTTGTCCCTTCCTTTTTTAATGTACAACTTTTTAGATTTTTTTTCAGGCGTTATGTTGATTTGTTTGTTCGTTTTTTCTTTATATATATTATATAAATTGAGAAAATTTTGAAAGATTACACAAGAAAACAAAAATGAGTCAGAACTACAAGATTGGGCTCCAGTTAAGAAAAATAAGATCTAAAGAATAATTACAAACAAACATAGAAACTAAGGGTCTGAGAGAAATATATAATCTAACAAGGGCCAAACACTGCTATACAAATTCTTACGCCCTCTAAAGATTTTGTTGTTTCTCTCTCTCCAACGCCACCCCCACCCCACCCCACAAAATAGCACACATATTGGCCTTTACTATGATTTGTTTGTGGACATCTCTCTGTTTACATGTTGAATTTCTTTGATGTAGTTGGAACGGGGATTACACGGTGTAGAGCCTATGGTTGTAGCCAACTTTCCAACTAAGAAGTACAATGATGATTACTTCTCATCTATGAGAAATGCTCAGTATGTGCCCCTTTAATTCACAGTTCCTCACTGCATTGGTTTTCATGATTTTTCATAATATTTCAAGAAAATCCCTTTGATAAGAAAATATGCGTATGTGCGTGAAAATACCGCCAATCATAAATTTCCACCAGAGCATTATGTTACTGACTGGCAGTGAAATACGTTATTGTTTGTTTCCTGTGGATAAGATTCTATTATGGCGTCTGAGAAAAGTTCGGCTGATGTGTAAATATCAATTCAACGTAAAGTATAATGGCTTTATCAATGAAAGGAGAGAGAATTGTGACTTCATGATTTACCTATGGAAATATGATGAGCTTGCAATGAGTCGGTCTTATAGTTGATTGGTTTTTCCCAAAGCATAATCATTTGTAAATATTGAGTGGGATGAGATGTCACAAACCAGATATTTAGCCCCATCACACTGTTCAGGTGGAAAAGCAGAAAGGAAAAAAGAACTCTTTGGGCCATGTAAGGTGTTTCTGGGAATGAATGGTGGCCTCTTGAAAATATCTCCAAAAAGTTAGTAGAATAGTGACTTCTTGATGAGATATTTTGGTAAGTTGCCTTTAAATAGAGTCCTAATCAGCCTGGGCCCTTAGCAATAGGTGTGGAAAAAGGAGTTGCTTGTTAAAATCTCATACTTGGAACAAGTGATGATGTGTTAATGGAGTGCCCTCTTTCTCTCTTTTAAATACACATCTACTATTCTTCAAGATGTGATCATTGCATCTTGGATGAAGTAGTTGTAACCCATATATTCATGTTAGAGTGGACCTGGTTCAATGGGATGATGGGATAATTCAAGAGCTCCCTATTCTTTCCCATTACCGAAAAATCCCAAATGATCAAAAGATGTGCTGTTCCCCTCTCAGCCAACGTACTTAATCATATTTACCAAACAATATCCCTCTCATATCCCGCTAATGAACAACTCAACTAAATGGGCCAAACTCATAAGTTCATAACAGAAGCCCTCTCCCTTACTCACTGATCAAGCCTGACTACCCCTCCTCCCGCTTCGGCCTTTCTTCTACCATATACTTCCACAATAGGGGTTTACCTCTGATCCATAAGAAAGAAAGCAAAAAAAAATAAAAAAATAAAAAATAAATGGAGAAAGAAAGAAGAAGAAGAAGAAGAGAGAGAGAGAGAGAGAAGACAATAGGAGGCTTAACAAGTTCATCTACTCAACAATATGAATGGGGAAAAAAATGAATCTTACTTTTATCATTCGGGCTGGATACATCAGATTTTGGAATAGAGAGGTAAAGCTTTCATGCTTCCTTTACATTCTCTGGTGGTTCTGTTGAAAACATGAGGCAAGAGATAGGCTGCCTACACCTGAAATATGGCTATAAGTTGTAAAATTACAGTTTATATGCTTTGGTCTATTGAGCTAGTTTTCAAAAATCTACCACATTGTCTTGATTATCTAAGTGGTCCCAGACTGATTGGTAATGTTAGAGAAGTGGCAGATATCTTGAGAAAATAAGCATGGCCATGGATGCTGGTCAAGTGTTCTTCTGAAAGTGGAGAAGTTTCTGTAGAGCAATATTTCTGAATGTCTCTCTTGTAGACTCACACATCAATAACAGAAATGATTCCTGCTGTGCATGATTTTGTCACAATTTTTTAGGGGAAGAAAAGACAAGATGTGGTTTTTTGATCCGAGGAAACAAAGTGAATTTCCAAATTTAGTCTGAAGACCGTATTGCCTAAATGCTACCTTTTGTTGACAGTTCGTGATGGAAAATAAATGATAATCTTTAAACTAGTGATTACAATTCCTTTTGCAGACCTTTTGGTATTATGGGATGCTTCATTCTGTGGTTATGTCCTCCATGTTTGTTTAGCAAATCATGGAAATTAATCACACAATATATAGTGTGCAATTAGAAACTTTGTGATTTCAAGAGCGAAACGAAAAAAGCCGAAGCATCAGTTCCTCTAGCCTTGGCTCCAGGGCTTTTGTGTGATTTAAGAACTTTCTCTAAAGTTTGATCCTTTGCAATAATTTGAAACATAGATTGAGGATGGTTTGTTTGAAATGAGGTTCTGTTATGTACCATCATCCATCTTCCCTGTAGTTCAGCAAATTTAATATACTATTCATAGTTTCCTATATGCTATAATTGGATTTCATACATAACCATGCACCACTTGGCAGAAATTAAGGACCTCTTGAAATTAAAAGGAAAGGATCTCTTGGATGAGAAGAAGAATGTCCACGCAAAAATTGAATGCAATTGCATTTGTGATTCTGTAAATCAGATATTTTGCATAGCGTTTAATTGGAGTGACATAGTAGTAATAAGTAACAAGATTGTTGTTTATGATGTTCTAAACAGTTCTTTCTCATCTTTTCCTATACTAAGATCATGAAACTGGGAAGTTATTTATTTTTGGAGTTCAACATGTGGGGTGGGGGGATTTGAATCTTTAACCTCTTGCCCAAGGGTACATGTTTAAACTAGTTGAGCATGATGGCAAGGAGTTATTTATTTTGAATGATATAAAATAGTATTTGGCAATTTTTTTTACTTGGAAGGAGAAGTTTCGAAAGCAAGCTTAGTAGTTTGTTGATGAAACATAGCTGATTGATTTTGGAGAAAGGTGAACTTGCACCTATCTTCTTGTCCTATTGACATACCCAGCTAAATTAGGTTTTGTTTTGAATGGCAGATGCACAGTTTGCTTGGCAGATTATCACAGTGAAGACTTATTGCGCATTCTCCCCCACTGTGGACATTCCTTCCATGTCACCTGTATAGACATTTGGCTGCATCAACACTCAACATGCCCGGTTTGTCGTCTATCATTACGCGAGGTCCCAGACAAGAAACGAACAATGCAACCCTTGTTTAGCTCAGCAATTCGCTCTCTTGACTCAGATCCCTGCCGTGGGTTCCCATTAAGAGACCTTCAAAACAGTGGGTTGGAACAACCAATCCAAGAGAACCACTGCACATCTGGGGCCAATGGAGCAGCGGATCCGATAGAGAATGCTGCCTCATTTATTGAAGGTAACCAGAATAGTAAAGGCTGTAGAAACAAAAATGTAGAAAGTCCATCAAATGCTTGAGCTTCTCTAATAGGACACTGGAATTGGTCATATAGAACTGTGTCCTAAAACTTAAAGTAGATGTCCTTCCCTTAACTACCTGCTTAGAAAGTTTGTCTTGTTATTTACCACTGTATATAAGTGTTGTTTGTAGTGAATTAATTTGTTGCTGGTTTTTTTGGGGCAGTTTTGTTAATTTTTCTTTGTACAACATTAGTTATTACACCATGAACTTTGCTTTTGGTAGTTCATCTCTCTCTGTCTGTCATATTTGTACCAATGCATGGTGAGAACAGCTTTTTTTAAGTTTTTAGCTAAATTCTTGCTTCTGGTATCAGAATCTCTCATTCTGCGGCTGCCGTTATTGTGTTTTGGAGTCTTTCATGTATTTTCCTGTGGGCTATGGGACACTGCAAGAATTGACCCAAATTCTTTATCTCTCCACTTTCTGCTGCTACATTAAATATTGAACCACTTTTGTTACCATCTTGTGGATTACAGTTGACTCTCACATGGATTTATTATATGCATTTCCGTC

mRNA sequence

CTTAATAATGATTTCTATTAATGTCTGAAGTGATTTGTTTCTTCGTTTTTAAATATATATAAGAAGATTCCATTTTCCTACACTACTTTGTATTTCAATTCCACTCTCCCAGTGATTCCAGTTTAGCTGATATTGGTGGGGTTTTTTTCTTTTCTCTAAATGGGTTCTCTGCTTTTCTGTTTTTGCCAATTCCCAATTCCTCCACCATGTATTCAATCTTTTTCTCTGGGATTTTTGCACTCTCTCCCACAATAAAACAGTCACTATCTGATATCGACACCCACCAGTTGATTAAACTTTAGTAAGTTTCCCACTTCCGTGCAAATTAATTCAAAATTTTAGCTTCTTTTTGCCTTTCCCCATTTGGGTTGTAGCGTTTTCCTGAAATGATTCATCATGAGAATCGAATTCCGTTCTAGTTTTGGGTTGAATGGGATTGGAATTCCTTCCGATGTTGAAGCTGCCGAAGTTAGCACGATTTCAATAGAAGACACTGTTGAATTGTAGAAACTGTTTTCACTGGGGAATTTAGAGTTTCGATTGGTGGAGAACGGAAATTTCGAGTAGAGGAGAAGAGGGTATTTGGAGAATGATGTCTTCGGGGGTGAATTTGGTGATGACAGTGATTGGGTTCACTGTGAGTACTTTGTTCATCGTATTCGTCTGTACAAGGCTTGTTTGTGCTAGGATTCATCTCAATGCTTCAAGGCGCTCCTTTCCAATCGCTTCTAGATCCGATCTCAGTGGGTTGGAACGGGGATTACACGGTGTAGAGCCTATGGTTGTAGCCAACTTTCCAACTAAGAAGTACAATGATGATTACTTCTCATCTATGAGAAATGCTCAATGCACAGTTTGCTTGGCAGATTATCACAGTGAAGACTTATTGCGCATTCTCCCCCACTGTGGACATTCCTTCCATGTCACCTGTATAGACATTTGGCTGCATCAACACTCAACATGCCCGGTTTGTCGTCTATCATTACGCGAGGTCCCAGACAAGAAACGAACAATGCAACCCTTGTTTAGCTCAGCAATTCGCTCTCTTGACTCAGATCCCTGCCGTGGGTTCCCATTAAGAGACCTTCAAAACAGTGGGTTGGAACAACCAATCCAAGAGAACCACTGCACATCTGGGGCCAATGGAGCAGCGGATCCGATAGAGAATGCTGCCTCATTTATTGAAGGTAACCAGAATAGTAAAGGCTGTAGAAACAAAAATGTAGAAAGTCCATCAAATGCTTGAGCTTCTCTAATAGGACACTGGAATTGGTCATATAGAACTGTGTCCTAAAACTTAAAGTAGATGTCCTTCCCTTAACTACCTGCTTAGAAAGTTTGTCTTGTTATTTACCACTGTATATAAGTGTTGTTTGTAGTGAATTAATTTGTTGCTGGTTTTTTTGGGGCAGTTTTGTTAATTTTTCTTTGTACAACATTAGTTATTACACCATGAACTTTGCTTTTGGTAGTTCATCTCTCTCTGTCTGTCATATTTGTACCAATGCATGGTGAGAACAGCTTTTTTTAAGTTTTTAGCTAAATTCTTGCTTCTGGTATCAGAATCTCTCATTCTGCGGCTGCCGTTATTGTGTTTTGGAGTCTTTCATGTATTTTCCTGTGGGCTATGGGACACTGCAAGAATTGACCCAAATTCTTTATCTCTCCACTTTCTGCTGCTACATTAAATATTGAACCACTTTTGTTACCATCTTGTGGATTACAGTTGACTCTCACATGGATTTATTATATGCATTTCCGTC

Coding sequence (CDS)

ATGATGTCTTCGGGGGTGAATTTGGTGATGACAGTGATTGGGTTCACTGTGAGTACTTTGTTCATCGTATTCGTCTGTACAAGGCTTGTTTGTGCTAGGATTCATCTCAATGCTTCAAGGCGCTCCTTTCCAATCGCTTCTAGATCCGATCTCAGTGGGTTGGAACGGGGATTACACGGTGTAGAGCCTATGGTTGTAGCCAACTTTCCAACTAAGAAGTACAATGATGATTACTTCTCATCTATGAGAAATGCTCAATGCACAGTTTGCTTGGCAGATTATCACAGTGAAGACTTATTGCGCATTCTCCCCCACTGTGGACATTCCTTCCATGTCACCTGTATAGACATTTGGCTGCATCAACACTCAACATGCCCGGTTTGTCGTCTATCATTACGCGAGGTCCCAGACAAGAAACGAACAATGCAACCCTTGTTTAGCTCAGCAATTCGCTCTCTTGACTCAGATCCCTGCCGTGGGTTCCCATTAAGAGACCTTCAAAACAGTGGGTTGGAACAACCAATCCAAGAGAACCACTGCACATCTGGGGCCAATGGAGCAGCGGATCCGATAGAGAATGCTGCCTCATTTATTGAAGGTAACCAGAATAGTAAAGGCTGTAGAAACAAAAATGTAGAAAGTCCATCAAATGCTTGA

Protein sequence

MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHGVEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLDSDPCRGFPLRDLQNSGLEQPIQENHCTSGANGAADPIENAASFIEGNQNSKGCRNKNVESPSNA

Homology

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BLAST of Bhi04G001022 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 84.7 bits (208), Expect = 9.8e-17
Identity = 34/98 (34.69%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 60  GVEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWL 119
           G++P V+ + P   ++D+  +     +C VCL+++   +  R+LP+C H+FHV CID+W 
Sbjct: 94  GLDPNVIKSLPVFTFSDE--THKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWF 153

Query: 120 HQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLDSDP 158
           H HSTCP+CR  +  +   + T        + ++DSDP
Sbjct: 154 HSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDP 189

[Close]

BLAST of Bhi04G001022 vs. TAIR 10
Match: AT2G34990.1 (RING/U-box superfamily protein )

HSP 1 Score: 83.6 bits (205), Expect = 2.2e-16
Identity = 52/206 (25.24%), Postives = 95/206 (46.12%), Query Frame = 0


Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGVEPM 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + G++  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  VVANFPTKKYND--DYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLHQH 127
           ++ +FPT  Y++  +    +   +C VC+ ++   + LR++P C H FH  C+ +WL  H
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 STCPVCRLSLREVPDKKRTMQP-----------LFSSAIRSLDSDPCRGFPLRDLQNSGL 187
           STCP+CR+ L   P ++  + P           LF     +  + P R +  R  Q    
Sbjct: 136 STCPLCRVDLCLQPGERSYLNPEPDLVESTNSHLFDGVTWTNRNRPSRSWSTRLSQCRVS 195

Query: 188 EQPIQENHCTSGANGAADPIENAASF 198
           +  I  +H T   +    P++N   F
Sbjct: 196 QILISRSHST--GHSVVQPLDNLDRF 215

[Close]

BLAST of Bhi04G001022 vs. TAIR 10
Match: AT4G10160.1 (RING/U-box superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 3.7e-16
Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 53  GLERGLHGVEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHV 112
           GL + +  + P+V+       Y + +  ++ + QC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 72  GLSKDIREMLPIVI-------YKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHM 131

Query: 113 TCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLDSDPCRGFPLRDLQNSGLE 172
            CID+WL  H+TCP+CRLSL   P    + Q +    + S+++        +    S  E
Sbjct: 132 ECIDLWLTSHTTCPLCRLSLIPKPSVDLSHQSI--EIVSSIENTNGGEASTQPDSQSATE 191

Query: 173 QPIQENHCTSGANGAADPIENAASFIEGNQNSKG 207
             I   H      G  D IE      E ++NS G
Sbjct: 192 AII---HIDDVEEGNRDSIEVVKESEENDRNSVG 211

[Close]

BLAST of Bhi04G001022 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 46/131 (35.11%), Postives = 63/131 (48.09%), Query Frame = 0


Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGVEPMVVA 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSN--KGIKKKALR 117

Query: 77  NFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLHQHSTCPV 136
            FP   Y+ +      + +C +CL+D+ S + LR+LP C H FHV CID WL QH TCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRLSLREVPDK 139
           CR  L E   K
Sbjct: 178 CRNCLVETCQK 186

[Close]

BLAST of Bhi04G001022 vs. TAIR 10
Match: AT4G10150.1 (RING/U-box superfamily protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-15
Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = 0


Query: 13  IGFTVSTLFIVFVCTRLVCARIHLNAS----RRSFPIASRSDLSGLERGLHGVEPMVVAN 72
           I FT   LF+++V      +  +++ S    R    + + ++LS  E GL      +   
Sbjct: 38  ICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPTNNNLSTAELGL---SKDIREM 97

Query: 73  FPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLHQHSTCPVC 132
            P   Y + +   ++++QC+VCL DY +E+ L+ +P CGH+FH+ CID+WL  H+TCP+C
Sbjct: 98  LPVVIYKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLC 157

Query: 133 RLSLREVP 137
           RLSL   P
Sbjct: 158 RLSLIPKP 160

[Close]

BLAST of Bhi04G001022 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 1.4e-15
Identity = 34/98 (34.69%), Postives = 58/98 (59.18%), Query Frame = 0


Query: 60  GVEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWL 119
           G++P V+ + P   ++D+  +     +C VCL+++   +  R+LP+C H+FHV CID+W 
Sbjct: 94  GLDPNVIKSLPVFTFSDE--THKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWF 153

Query: 120 HQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLDSDP 158
           H HSTCP+CR  +  +   + T        + ++DSDP
Sbjct: 154 HSHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDP 189

[Close]

BLAST of Bhi04G001022 vs. ExPASy Swiss-Prot
Match: O64762 (RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 3.1e-15
Identity = 52/206 (25.24%), Postives = 95/206 (46.12%), Query Frame = 0


Query: 8   LVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF---PIASRSDLSGLERGLHGVEPM 67
           LV+T+I F +  + +  VC R    + +   S   F    + SR+ ++     + G++  
Sbjct: 16  LVITIILFAIFIVGLASVCFRWTSRQFYSQESINPFTDSDVESRTSIT----AVRGLDEA 75

Query: 68  VVANFPTKKYND--DYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLHQH 127
           ++ +FPT  Y++  +    +   +C VC+ ++   + LR++P C H FH  C+ +WL  H
Sbjct: 76  IINSFPTFLYSEVKERRIGIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDH 135

Query: 128 STCPVCRLSLREVPDKKRTMQP-----------LFSSAIRSLDSDPCRGFPLRDLQNSGL 187
           STCP+CR+ L   P ++  + P           LF     +  + P R +  R  Q    
Sbjct: 136 STCPLCRVDLCLQPGERSYLNPEPDLVESTNSHLFDGVTWTNRNRPSRSWSTRLSQCRVS 195

Query: 188 EQPIQENHCTSGANGAADPIENAASF 198
           +  I  +H T   +    P++N   F
Sbjct: 196 QILISRSHST--GHSVVQPLDNLDRF 215

[Close]

BLAST of Bhi04G001022 vs. ExPASy Swiss-Prot
Match: Q9SN27 (E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.3e-15
Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = 0


Query: 53  GLERGLHGVEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHV 112
           GL + +  + P+V+       Y + +  ++ + QC+VCL DY +E+ L+ +P CGH+FH+
Sbjct: 72  GLSKDIREMLPIVI-------YKESF--TVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHM 131

Query: 113 TCIDIWLHQHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLDSDPCRGFPLRDLQNSGLE 172
            CID+WL  H+TCP+CRLSL   P    + Q +    + S+++        +    S  E
Sbjct: 132 ECIDLWLTSHTTCPLCRLSLIPKPSVDLSHQSI--EIVSSIENTNGGEASTQPDSQSATE 191

Query: 173 QPIQENHCTSGANGAADPIENAASFIEGNQNSKG 207
             I   H      G  D IE      E ++NS G
Sbjct: 192 AII---HIDDVEEGNRDSIEVVKESEENDRNSVG 211

[Close]

BLAST of Bhi04G001022 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-14
Identity = 46/131 (35.11%), Postives = 63/131 (48.09%), Query Frame = 0


Query: 17  VSTLFIVFVCTRLVCARIH------LNASRR---SFPIASRSDLSGLERGLHGVEPMVVA 76
           V  L  + +C  + C  +H      L  S R   S P+ S S   G      G++   + 
Sbjct: 58  VMMLLSILICGIICCLGLHYIIRCALRRSTRFMISEPVPSLSSTRGSSN--KGIKKKALR 117

Query: 77  NFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLHQHSTCPV 136
            FP   Y+ +      + +C +CL+D+ S + LR+LP C H FHV CID WL QH TCP 
Sbjct: 118 MFPVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPK 177

Query: 137 CRLSLREVPDK 139
           CR  L E   K
Sbjct: 178 CRNCLVETCQK 186

[Close]

BLAST of Bhi04G001022 vs. ExPASy Swiss-Prot
Match: Q9SN28 (RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.5e-14
Identity = 45/128 (35.16%), Postives = 73/128 (57.03%), Query Frame = 0


Query: 13  IGFTVSTLFIVFVCTRLVCARIHLNAS----RRSFPIASRSDLSGLERGLHGVEPMVVAN 72
           I FT   LF+++V      +  +++ S    R    + + ++LS  E GL      +   
Sbjct: 38  ICFTFIVLFVLYVIYLRRNSTTNVDWSSLGMRGGTFVPTNNNLSTAELGL---SKDIREM 97

Query: 73  FPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLHQHSTCPVC 132
            P   Y + +   ++++QC+VCL DY +E+ L+ +P CGH+FH+ CID+WL  H+TCP+C
Sbjct: 98  LPVVIYKESFI--VKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLC 157

Query: 133 RLSLREVP 137
           RLSL   P
Sbjct: 158 RLSLIPKP 160

[Close]

BLAST of Bhi04G001022 vs. ExPASy TrEMBL
Match: A0A5D3CKS4 (RING-H2 finger protein ATL8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G00660 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 3.6e-115
Identity = 207/218 (94.95%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLH 120
           VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILP+CGHSFHV CIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLDSDPCRGFPLRDLQNSGLEQPIQENHC 180
           QHSTCPVCRLSLREV DKKRTMQPLFSSAIRSL+SDPCRGFPLRDL+N+GLEQPIQENH 
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHY 180

Query: 181 TSGANGAADPIENAASFIEGNQNSKGCRNKNVESPSNA 219
           T GANGA DPIENA+ FIEGNQNSKGCRNKNVESPSNA
Sbjct: 181 TPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of Bhi04G001022 vs. ExPASy TrEMBL
Match: A0A1S3C364 (RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV=1)

HSP 1 Score: 424.1 bits (1089), Expect = 3.6e-115
Identity = 207/218 (94.95%), Postives = 212/218 (97.25%), Query Frame = 0


Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLH 120
           VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILP+CGHSFHV CIDIWLH
Sbjct: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLDSDPCRGFPLRDLQNSGLEQPIQENHC 180
           QHSTCPVCRLSLREV DKKRTMQPLFSSAIRSL+SDPCRGFPLRDL+N+GLEQPIQENH 
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRSLNSDPCRGFPLRDLENNGLEQPIQENHY 180

Query: 181 TSGANGAADPIENAASFIEGNQNSKGCRNKNVESPSNA 219
           T GANGA DPIENA+ FIEGNQNSKGCRNKNVESPSNA
Sbjct: 181 TPGANGAVDPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of Bhi04G001022 vs. ExPASy TrEMBL
Match: A0A0A0KB30 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G044540 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.1e-114
Identity = 204/218 (93.58%), Postives = 213/218 (97.71%), Query Frame = 0


Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60

Query: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLH 120
           VEPMVVANFPTKKY+DDYFSSM+NAQCTVCLADYHSEDLLRILP+CGHSFHV CIDIWLH
Sbjct: 61  VEPMVVANFPTKKYSDDYFSSMQNAQCTVCLADYHSEDLLRILPYCGHSFHVNCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVPDKKRTMQPLFSSAIRSLDSDPCRGFPLRDLQNSGLEQPIQENHC 180
           QHSTCPVCRLSLREV DKKRTMQPLFSSAIR+L+SDPCRGFPLRDL+N+GLEQPIQENH 
Sbjct: 121 QHSTCPVCRLSLREVQDKKRTMQPLFSSAIRALNSDPCRGFPLRDLENNGLEQPIQENHY 180

Query: 181 TSGANGAADPIENAASFIEGNQNSKGCRNKNVESPSNA 219
           T+G NGAADPIENA+ FIEGNQNSKGCRNKNVESPSNA
Sbjct: 181 TTGTNGAADPIENASPFIEGNQNSKGCRNKNVESPSNA 218

[Close]

BLAST of Bhi04G001022 vs. ExPASy TrEMBL
Match: A0A6J1JQ55 (RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111487309 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.0e-98
Identity = 191/225 (84.89%), Postives = 202/225 (89.78%), Query Frame = 0


Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHL+ASRRSF +ASRSDLSGLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLHASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLH 120
           VEP VVANFPTKKY+D+YFSSMRNAQCTVCLADYHSEDLLRILP+CGHSFHVTCIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYHSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVPDKKRTMQPLFSSAIRS---LDSD----PCRGFPLRDLQNSGLEQ 180
           +HSTCPVCR SLREVPDKKRT+QPLFSSAIRS   L+SD    PC GFPL D +N+GLE 
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE- 180

Query: 181 PIQENHCTSGANGAADPIENAASFIEGNQNSKGCRNKNVESPSNA 219
           PIQEN     ANGAADPIENA+SF EGN NSKG RNKNVESPSNA
Sbjct: 181 PIQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNVESPSNA 220

[Close]

BLAST of Bhi04G001022 vs. ExPASy TrEMBL
Match: A0A6J1H8I0 (RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111461516 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97
Identity = 190/225 (84.44%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFPIASRSDLSGLERGLHG 60
           MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSF +ASRSDLSGLERG HG
Sbjct: 1   MMSSGVNLVMTVIGFTVSTLFIVFVCTRLVCARIHLNASRRSFLVASRSDLSGLERGQHG 60

Query: 61  VEPMVVANFPTKKYNDDYFSSMRNAQCTVCLADYHSEDLLRILPHCGHSFHVTCIDIWLH 120
           VEP VVANFPTKKY+D+YFSSMRNAQCTVCLADY+SEDLLRILP+CGHSFHVTCIDIWLH
Sbjct: 61  VEPFVVANFPTKKYSDEYFSSMRNAQCTVCLADYNSEDLLRILPYCGHSFHVTCIDIWLH 120

Query: 121 QHSTCPVCRLSLREVPDKKRTMQPLFSSAIRS---LDSD----PCRGFPLRDLQNSGLEQ 180
           +HSTCPVCR SLREVPDKKRT+QPLFSSAIRS   L+SD    PC GFPL D +N+GLE 
Sbjct: 121 RHSTCPVCRTSLREVPDKKRTLQPLFSSAIRSHYNLNSDVCAYPCHGFPLSDHENTGLE- 180

Query: 181 PIQENHCTSGANGAADPIENAASFIEGNQNSKGCRNKNVESPSNA 219
           PIQEN     ANGAADPIENA+SF EGN NSKG RNKNV SPSNA
Sbjct: 181 PIQENQ----ANGAADPIENASSFTEGNLNSKGSRNKNVVSPSNA 220

The following BLAST results are available for this feature:

BLAST of Bhi04G001022 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16720.1	9.8e-17	34.69	TOXICOS EN LEVADURA 2	[more]
AT2G34990.1	2.2e-16	25.24	RING/U-box superfamily protein	[more]
AT4G10160.1	3.7e-16	31.82	RING/U-box superfamily protein	[more]
AT1G49220.1	1.1e-15	35.11	RING/U-box superfamily protein	[more]
AT4G10150.1	1.1e-15	35.16	RING/U-box superfamily protein	[more]

BLAST of Bhi04G001022 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9T5	1.4e-15	34.69	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
O64762	3.1e-15	25.24	RING-H2 finger protein ATL38 OS=Arabidopsis thaliana OX=3702 GN=ATL38 PE=2 SV=1	[more]
Q9SN27	5.3e-15	31.82	E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana OX=3702 GN=ATL59 PE=1 ...	[more]
P0C034	1.5e-14	35.11	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]
Q9SN28	1.5e-14	35.16	RING-H2 finger protein ATL7 OS=Arabidopsis thaliana OX=3702 GN=ATL7 PE=2 SV=1	[more]

BLAST of Bhi04G001022 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CKS4	3.6e-115	94.95	RING-H2 finger protein ATL8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3C364	3.6e-115	94.95	RING-H2 finger protein ATL8-like OS=Cucumis melo OX=3656 GN=LOC103496494 PE=4 SV...	[more]
A0A0A0KB30	5.1e-114	93.58	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G044540 P...	[more]
A0A6J1JQ55	1.0e-98	84.89	RING-H2 finger protein ATL74-like OS=Cucurbita maxima OX=3661 GN=LOC111487309 PE...	[more]
A0A6J1H8I0	1.1e-97	84.44	RING-H2 finger protein ATL74-like OS=Cucurbita moschata OX=3662 GN=LOC111461516 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 87..128 e-value: 2.4E-6 score: 37.1
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 86..129 e-value: 2.8E-12 score: 46.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 87..129 score: 12.563043
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 55..134 e-value: 5.5E-20 score: 72.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..218
None	No IPR available	PANTHER	PTHR47035	OS11G0150450 PROTEIN	coord: 1..217
None	No IPR available	PANTHER	PTHR47035:SF3	OS11G0150450 PROTEIN	coord: 1..217
None	No IPR available	CDD	cd16486	mRING-H2-C3H2C2D_ZSWM2	coord: 86..129 e-value: 2.0379E-16 score: 68.4073
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 86..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M001022	Bhi04M001022	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane