Bhi04G000631 (gene) Wax gourd (B227) v1

Overview
NameBhi04G000631
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
Descriptionmethyl-CpG-binding domain-containing protein 8-like
Locationchr4: 18826602 .. 18827279 (-)
RNA-Seq ExpressionBhi04G000631
SyntenyBhi04G000631
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCACAACTATGGTTGCTTCCCCTTCCAACGATAGTTTCCGCATGAATCCTCTTCCGATCATAGATCTCCGTCTCCTCTCTCAATCCGAGCTCTATTGTCTTTCCCGTTTCTCCTCATCCTCATCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAATGAGTCCGCTGGTAGCCGTAAACAAACCTATTCTCGTCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCCTCCACAATTCGCCCTCAATCCCCTGACCGCCTTGATACAGAGAGCGCTCAAATTGTTACTCTATTTAAGCAACTCTTTGTTGGAGATCCTCATTGTGCCGTCAACGATAGCTACGGCGACGGAGATGAGGACCTGGTACTTGTTAACCATATTTACGACGAATCGGTACCTGATTCTTCCTACGCTATTTTCCAAAGTATTCCTGTTGATATTATTGATAGCAGTTACGCCCCGATTAAGCGGCGGAGAGGTCGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGGAATTCAAAAGCGGATGCGATAAACCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGA

mRNA sequence

ATGGCTTCCACAACTATGGTTGCTTCCCCTTCCAACGATAGTTTCCGCATGAATCCTCTTCCGATCATAGATCTCCGTCTCCTCTCTCAATCCGAGCTCTATTGTCTTTCCCGTTTCTCCTCATCCTCATCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAATGAGTCCGCTGGTAGCCGTAAACAAACCTATTCTCGTCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCCTCCACAATTCGCCCTCAATCCCCTGACCGCCTTGATACAGAGAGCGCTCAAATTGTTACTCTATTTAAGCAACTCTTTGTTGGAGATCCTCATTGTGCCGTCAACGATAGCTACGGCGACGGAGATGAGGACCTGGTACTTGTTAACCATATTTACGACGAATCGGTACCTGATTCTTCCTACGCTATTTTCCAAAGTATTCCTGTTGATATTATTGATAGCAGTTACGCCCCGATTAAGCGGCGGAGAGGTCGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGGAATTCAAAAGCGGATGCGATAAACCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGA

Coding sequence (CDS)

ATGGCTTCCACAACTATGGTTGCTTCCCCTTCCAACGATAGTTTCCGCATGAATCCTCTTCCGATCATAGATCTCCGTCTCCTCTCTCAATCCGAGCTCTATTGTCTTTCCCGTTTCTCCTCATCCTCATCATCTTCTTCTTCAACCTCCCAATCCAACAACGAAGACGACGTTCTAATCCCCAAAATTGATCGATCTGTCTTCAATGAGTCCGCTGGTAGCCGTAAACAAACCTATTCTCGTCTCCGTTTAGCCCCTCGCAAACCCCAATTTTCTTCCTCTTCATCCTCCTCCACAATTCGCCCTCAATCCCCTGACCGCCTTGATACAGAGAGCGCTCAAATTGTTACTCTATTTAAGCAACTCTTTGTTGGAGATCCTCATTGTGCCGTCAACGATAGCTACGGCGACGGAGATGAGGACCTGGTACTTGTTAACCATATTTACGACGAATCGGTACCTGATTCTTCCTACGCTATTTTCCAAAGTATTCCTGTTGATATTATTGATAGCAGTTACGCCCCGATTAAGCGGCGGAGAGGTCGACCGCGGAAGGATAGCAATCGGTTTGCTCAGAGTAATGGAAATGCGGCTCCGGAATTCAAAAGCGGATGCGATAAACCGGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGAGATCGTAATGGTAATGCTGTGA

Protein sequence

MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFKQLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRRGRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVMVML
Homology
BLAST of Bhi04G000631 vs. TAIR 10
Match: AT1G22310.2 (methyl-CPG-binding domain 8 )

HSP 1 Score: 90.1 bits (222), Expect = 2.4e-18
Identity = 79/176 (44.89%), Postives = 102/176 (57.95%), Query Frame = 0

Query: 20  LPIIDLRLLSQSELYCLSRFSS-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQT 79
           LP+ID RLLSQSEL  LS+ SS S SSS+S + S   DD L PKIDRSVFNESAGSRKQT
Sbjct: 26  LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85

Query: 80  YSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFKQLFVGDPHCAVNDSYGDG 139
           + RLRLA R PQ      S   + Q  D    E  Q+ +L + LF  D + +  +   +G
Sbjct: 86  FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145

Query: 140 DEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDSN 189
           +E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

BLAST of Bhi04G000631 vs. ExPASy Swiss-Prot
Match: Q9LME6 (Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=MBD8 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 3.4e-17
Identity = 79/176 (44.89%), Postives = 102/176 (57.95%), Query Frame = 0

Query: 20  LPIIDLRLLSQSELYCLSRFSS-SSSSSSSTSQSNNEDDVLIPKIDRSVFNESAGSRKQT 79
           LP+ID RLLSQSEL  LS+ SS S SSS+S + S   DD L PKIDRSVFNESAGSRKQT
Sbjct: 26  LPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGSRKQT 85

Query: 80  YSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFKQLFVGDPHCAVNDSYGDG 139
           + RLRLA R PQ      S   + Q  D    E  Q+ +L + LF  D + +  +   +G
Sbjct: 86  FLRLRLA-RHPQPPEEPPSP--QRQRDDSSREEQTQVASLLRSLFNVDSNQS-KEEEDEG 145

Query: 140 DEDLVLVNHIYDESVPDSSYAIFQSIPVDIID------SSYAPIKRRRGRPRKDSN 189
           +E+L       +  +  +SY ++Q   +D I       +S   IKR+RGRPRK  N
Sbjct: 146 EEEL----EDNEGQIHYNSY-VYQRPNLDSIQNVLIQGTSGNKIKRKRGRPRKIRN 192

BLAST of Bhi04G000631 vs. ExPASy TrEMBL
Match: A0A0A0LPH8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368980 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.7e-102
Identity = 207/225 (92.00%), Postives = 211/225 (93.78%), Query Frame = 0

Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSSTSQSNNEDDVLI 60

Query: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
           PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIV LF 
Sbjct: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVHLFN 120

Query: 121 QLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
           QLFVGD HC VNDSYGDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS  PIKRRR
Sbjct: 121 QLFVGDSHCVVNDSYGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSQVPIKRRR 180

Query: 181 GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVMVML 226
           GRPRKDSNRF QSNGNAAPEFKSGCDKPAAAAA   +EEIVMVML
Sbjct: 181 GRPRKDSNRFVQSNGNAAPEFKSGCDKPAAAAA--AKEEIVMVML 222

BLAST of Bhi04G000631 vs. ExPASy TrEMBL
Match: A0A5A7VH26 (Methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004810 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.8e-101
Identity = 206/225 (91.56%), Postives = 211/225 (93.78%), Query Frame = 0

Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSSTSQSNNEDDVLI 60

Query: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
           PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF 
Sbjct: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFN 120

Query: 121 QLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
           QLFVGD HCAVNDS+GDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+APIKRRR
Sbjct: 121 QLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRR 180

Query: 181 GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVMVML 226
           GRPRKDSNRF QSNGNAAPEFKSG DKPA AAA   EEEIVMVML
Sbjct: 181 GRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAA---EEEIVMVML 221

BLAST of Bhi04G000631 vs. ExPASy TrEMBL
Match: A0A1S3BAU3 (methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103488067 PE=4 SV=1)

HSP 1 Score: 376.3 bits (965), Expect = 8.8e-101
Identity = 206/225 (91.56%), Postives = 211/225 (93.78%), Query Frame = 0

Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSSTSQSNNEDDVLI 60

Query: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
           PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF 
Sbjct: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFN 120

Query: 121 QLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
           QLFVGD HCAVNDS+GDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+APIKRRR
Sbjct: 121 QLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRR 180

Query: 181 GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVMVML 226
           GRPRKDSNRF QSNGNAAPEFKSG DKPA AAA   EEEIVMVML
Sbjct: 181 GRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAA---EEEIVMVML 221

BLAST of Bhi04G000631 vs. ExPASy TrEMBL
Match: A0A1S3BC64 (methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488067 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.2e-99
Identity = 200/216 (92.59%), Postives = 205/216 (94.91%), Query Frame = 0

Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
           MASTTMV S SNDS+RMNPLPIIDLRLLSQSEL+CLSRF SSSSSSSSTSQSNNEDDVLI
Sbjct: 1   MASTTMVPSSSNDSYRMNPLPIIDLRLLSQSELHCLSRF-SSSSSSSSTSQSNNEDDVLI 60

Query: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
           PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQS DRLDTESAQIV LF 
Sbjct: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSSDRLDTESAQIVHLFN 120

Query: 121 QLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
           QLFVGD HCAVNDS+GDGDEDLVLVNH YDESVPDSSYAIFQSIPVD+IDSS+APIKRRR
Sbjct: 121 QLFVGDSHCAVNDSHGDGDEDLVLVNHTYDESVPDSSYAIFQSIPVDVIDSSHAPIKRRR 180

Query: 181 GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEE 217
           GRPRKDSNRF QSNGNAAPEFKSG DKPA AAAEEE
Sbjct: 181 GRPRKDSNRFVQSNGNAAPEFKSGSDKPAGAAAEEE 215

BLAST of Bhi04G000631 vs. ExPASy TrEMBL
Match: A0A6J1K4I5 (methyl-CpG-binding domain-containing protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111492221 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.5e-95
Identity = 198/225 (88.00%), Postives = 202/225 (89.78%), Query Frame = 0

Query: 1   MASTTMVASPSNDSFRMNPLPIIDLRLLSQSELYCLSRFSSSSSSSSSTSQSNNEDDVLI 60
           MASTTMVASPSND+ RMN LPIIDLR LSQS+LYCLSRF   SSSSSSTSQSNN+DDVLI
Sbjct: 1   MASTTMVASPSNDNLRMNTLPIIDLRRLSQSDLYCLSRF--FSSSSSSTSQSNNDDDVLI 60

Query: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSSSSSTIRPQSPDRLDTESAQIVTLFK 120
           PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSS SSST R QS DRLD  SAQIVT  K
Sbjct: 61  PKIDRSVFNESAGSRKQTYSRLRLAPRKPQFSSSLSSSTFRSQSSDRLDVGSAQIVTRLK 120

Query: 121 QLFVGDPHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYAPIKRRR 180
           QLFVGD HCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSY PIKRRR
Sbjct: 121 QLFVGDSHCAVNDSYGDGDEDLVLVNHIYDESVPDSSYAIFQSIPVDIIDSSYGPIKRRR 180

Query: 181 GRPRKDSNRFAQSNGNAAPEFKSGCDKPAAAAAEEEEEEIVMVML 226
           GRPRKDSNRFAQSNGNAAP  KSGC+K AA    EEEEEIVMVML
Sbjct: 181 GRPRKDSNRFAQSNGNAAPNSKSGCEKRAA----EEEEEIVMVML 219

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G22310.22.4e-1844.89methyl-CPG-binding domain 8 [more]
Match NameE-valueIdentityDescription
Q9LME63.4e-1744.89Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 G... [more]
Match NameE-valueIdentityDescription
A0A0A0LPH84.7e-10292.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368980 PE=4 SV=1[more]
A0A5A7VH268.8e-10191.56Methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo var. m... [more]
A0A1S3BAU38.8e-10191.56methyl-CpG-binding domain-containing protein 8 isoform X2 OS=Cucumis melo OX=365... [more]
A0A1S3BC642.2e-9992.59methyl-CpG-binding domain-containing protein 8 isoform X1 OS=Cucumis melo OX=365... [more]
A0A6J1K4I52.5e-9588.00methyl-CpG-binding domain-containing protein 8-like OS=Cucurbita maxima OX=3661 ... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..212
NoneNo IPR availablePANTHERPTHR37701:SF1METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8coord: 6..221
IPR037472Methyl-CpG-binding domain-containing protein 8PANTHERPTHR37701METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8coord: 6..221

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000631Bhi04M000631mRNA