Bhi04G000569 (gene) Wax gourd (B227) v1

Overview


Name	Bhi04G000569
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	cell division cycle and apoptosis regulator protein 1
Location	chr4: 16172538 .. 16172890 (+)
RNA-Seq Expression	Bhi04G000569
Synteny	Bhi04G000569

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATCCAAGGAAGCAAAGGAAGGGAAGGAAGGTACTTTTCTTTTGCTTATCTACTTAAAAGACACTATTAACTTTATTATATTTACTACTAAAATGTTAACATCCCCTTGCTATTTATTTTCGTAGTCAAAGAAATGGAATCAACAAAAGATACTAAAATCATTGATAAGCTTGAAAAAGAGCAACACTCTGTGTCAACCAGGCAGACCGGCATAGATAAAAAGGAAAAGAGTAACAAAGGGGACAAAGGAAATACATCCGAGGGAAGGGGTAATGCAAGTAGCACAAAACTTGAAAGCAAGGATGCAGAAGAAAGAGGCAAGGAAGCTCAAAATGTTGAGAAACCAGATTAA

mRNA sequence

ATATCCAAGGAAGCAAAGGAAGGGAAGGAAGTCAAAGAAATGGAATCAACAAAAGATACTAAAATCATTGATAAGCTTGAAAAAGAGCAACACTCTGTGTCAACCAGGCAGACCGGCATAGATAAAAAGGAAAAGAGTAACAAAGGGGACAAAGGAAATACATCCGAGGGAAGGGGTAATGCAAGTAGCACAAAACTTGAAAGCAAGGATGCAGAAGAAAGAGGCAAGGAAGCTCAAAATGTTGAGAAACCAGATTAA

Coding sequence (CDS)

ATATCCAAGGAAGCAAAGGAAGGGAAGGAAGTCAAAGAAATGGAATCAACAAAAGATACTAAAATCATTGATAAGCTTGAAAAAGAGCAACACTCTGTGTCAACCAGGCAGACCGGCATAGATAAAAAGGAAAAGAGTAACAAAGGGGACAAAGGAAATACATCCGAGGGAAGGGGTAATGCAAGTAGCACAAAACTTGAAAGCAAGGATGCAGAAGAAAGAGGCAAGGAAGCTCAAAATGTTGAGAAACCAGATTAA

Protein sequence

ISKEAKEGKEVKEMESTKDTKIIDKLEKEQHSVSTRQTGIDKKEKSNKGDKGNTSEGRGNASSTKLESKDAEERGKEAQNVEKPD

Homology

[Close]

BLAST of Bhi04G000569 vs. ExPASy TrEMBL
Match: A0A5D3BAW1 (Cell division cycle and apoptosis regulator protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2612G00540 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.9e-25
Identity = 70/85 (82.35%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1   ISKEAKEGKEVKEMESTKDTKIIDKLEKEQHSVSTRQTGIDKKEKSNKGDKGNTSEGRGN 60
           ISKEAKEG EVKE ESTKDTK +DK EKEQH+VSTRQ  ID+KEKS+KG+KGNT+EGRGN
Sbjct: 723 ISKEAKEGMEVKEAESTKDTKSVDKFEKEQHTVSTRQADIDQKEKSDKGEKGNTTEGRGN 782

Query: 61  ASSTKLESKDAEERGKEAQNVEKPD 86
            SS+KLESKDA+ERGKEAQNVEKPD
Sbjct: 783 GSSSKLESKDADERGKEAQNVEKPD 807

[Close]

BLAST of Bhi04G000569 vs. ExPASy TrEMBL
Match: A0A1S3CPK5 (cell division cycle and apoptosis regulator protein 1 OS=Cucumis melo OX=3656 GN=LOC103503353 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.9e-25
Identity = 70/85 (82.35%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1   ISKEAKEGKEVKEMESTKDTKIIDKLEKEQHSVSTRQTGIDKKEKSNKGDKGNTSEGRGN 60
           ISKEAKEG EVKE ESTKDTK +DK EKEQH+VSTRQ  ID+KEKS+KG+KGNT+EGRGN
Sbjct: 723 ISKEAKEGMEVKEAESTKDTKSVDKFEKEQHTVSTRQADIDQKEKSDKGEKGNTTEGRGN 782

Query: 61  ASSTKLESKDAEERGKEAQNVEKPD 86
            SS+KLESKDA+ERGKEAQNVEKPD
Sbjct: 783 GSSSKLESKDADERGKEAQNVEKPD 807

[Close]

BLAST of Bhi04G000569 vs. ExPASy TrEMBL
Match: A0A0A0KRX1 (EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G469040 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 68/84 (80.95%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 2   SKEAKEGKEVKEMESTKDTKIIDKLEKEQHSVSTRQTGIDKKEKSNKGDKGNTSEGRGNA 61
           SKEAKEG EVKE ESTKDTK +DK EKEQH+VS RQ  ID+KEKS+KGDKGNTSEGRG  
Sbjct: 724 SKEAKEGMEVKEAESTKDTKSVDKFEKEQHTVSIRQADIDQKEKSDKGDKGNTSEGRGTG 783

Query: 62  SSTKLESKDAEERGKEAQNVEKPD 86
           SS+KLESKD +ERGKEAQNVEKPD
Sbjct: 784 SSSKLESKDGDERGKEAQNVEKPD 807

[Close]

BLAST of Bhi04G000569 vs. ExPASy TrEMBL
Match: A0A6J1I729 (cell division cycle and apoptosis regulator protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111471837 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-15
Identity = 59/85 (69.41%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 1   ISKEAKEGKEVKEMESTKDTKIIDKLEKEQHSVSTRQTGIDKKEKSNKGDKGNTSEGRGN 60
           ISKE KEG EVKE ESTKDTK + K E              KKEKS+K DKGNTSEGRGN
Sbjct: 724 ISKETKEGMEVKETESTKDTKSVSKSE--------------KKEKSDKDDKGNTSEGRGN 783

Query: 61  ASSTKLESKDAEERGKEAQNVEKPD 86
            SSTKLESKD +ERGKEAQNVEKPD
Sbjct: 784 GSSTKLESKDEDERGKEAQNVEKPD 794

[Close]

BLAST of Bhi04G000569 vs. ExPASy TrEMBL
Match: A0A6J1GHB7 (cell division cycle and apoptosis regulator protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111454171 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-15
Identity = 59/85 (69.41%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 1   ISKEAKEGKEVKEMESTKDTKIIDKLEKEQHSVSTRQTGIDKKEKSNKGDKGNTSEGRGN 60
           ISKE KEG EVKE ESTKDTK + K E              KKEKS+K DKGNTSEGRGN
Sbjct: 724 ISKETKEGMEVKETESTKDTKSVSKSE--------------KKEKSDKDDKGNTSEGRGN 783

Query: 61  ASSTKLESKDAEERGKEAQNVEKPD 86
            SSTKLESKD +ERGKEAQNVEKPD
Sbjct: 784 GSSTKLESKDEDERGKEAQNVEKPD 794

The following BLAST results are available for this feature:

BLAST of Bhi04G000569 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi04G000569 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi04G000569 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BAW1	3.9e-25	82.35	Cell division cycle and apoptosis regulator protein 1 OS=Cucumis melo var. makuw...	[more]
A0A1S3CPK5	3.9e-25	82.35	cell division cycle and apoptosis regulator protein 1 OS=Cucumis melo OX=3656 GN...	[more]
A0A0A0KRX1	1.6e-23	80.95	EF-hand domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G469040 PE=...	[more]
A0A6J1I729	2.8e-15	69.41	cell division cycle and apoptosis regulator protein 1-like OS=Cucurbita maxima O...	[more]
A0A6J1GHB7	2.8e-15	69.41	cell division cycle and apoptosis regulator protein 1-like OS=Cucurbita moschata...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi04M000569	Bhi04M000569	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051301	cell division
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0030374	nuclear receptor coactivator activity