Bhi04G000362 (gene) Wax gourd (B227) v1

Overview
NameBhi04G000362
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionF-box protein GID2-like
Locationchr4: 9900159 .. 9900581 (-)
RNA-Seq ExpressionBhi04G000362
SyntenyBhi04G000362
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGAAAATCAAGAAAATTAAATCAGATTCTTACGAACAAGAACCAGAATCCCAATCACCACCCTCTACGTTTGCAAATTTAGACGACAATCTGTTGTTCGAAGTGTTTAAGCACGTTGACGCAAGGACACTGGCCACGGCGGCCGGCGTCAGCAAGCAGTGGTTCAAAACCGCCCACGACGAGCGCCTCTGGGAGCTGCTCTGCACCAAACACTGGACCAACGTCGGCTGTGCTAATCAACAGCTACGCTCCGTCGTGCTTGCGCTTGGTGGCTTCCGTCGGTTACACTCTCTTTACCCATTTTCCCCTATGATTGGATGTAATCCATGGGGGAAAGACGAGGTTCATCTCTCCCTCTCTCTTCTCTCAATTCGTTACTACGAGAAGATGAAATTTAAAGACAGACCCACATCTTGA

mRNA sequence

ATGAAGAAGAAAATCAAGAAAATTAAATCAGATTCTTACGAACAAGAACCAGAATCCCAATCACCACCCTCTACGTTTGCAAATTTAGACGACAATCTGTTGTTCGAAGTGTTTAAGCACGTTGACGCAAGGACACTGGCCACGGCGGCCGGCGTCAGCAAGCAGTGGTTCAAAACCGCCCACGACGAGCGCCTCTGGGAGCTGCTCTGCACCAAACACTGGACCAACGTCGGCTGTGCTAATCAACAGCTACGCTCCGTCGTGCTTGCGCTTGGTGGCTTCCGTCGGTTACACTCTCTTTACCCATTTTCCCCTATGATTGGATGTAATCCATGGGGGAAAGACGAGGTTCATCTCTCCCTCTCTCTTCTCTCAATTCGTTACTACGAGAAGATGAAATTTAAAGACAGACCCACATCTTGA

Coding sequence (CDS)

ATGAAGAAGAAAATCAAGAAAATTAAATCAGATTCTTACGAACAAGAACCAGAATCCCAATCACCACCCTCTACGTTTGCAAATTTAGACGACAATCTGTTGTTCGAAGTGTTTAAGCACGTTGACGCAAGGACACTGGCCACGGCGGCCGGCGTCAGCAAGCAGTGGTTCAAAACCGCCCACGACGAGCGCCTCTGGGAGCTGCTCTGCACCAAACACTGGACCAACGTCGGCTGTGCTAATCAACAGCTACGCTCCGTCGTGCTTGCGCTTGGTGGCTTCCGTCGGTTACACTCTCTTTACCCATTTTCCCCTATGATTGGATGTAATCCATGGGGGAAAGACGAGGTTCATCTCTCCCTCTCTCTTCTCTCAATTCGTTACTACGAGAAGATGAAATTTAAAGACAGACCCACATCTTGA

Protein sequence

MKKKIKKIKSDSYEQEPESQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAHDERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIGCNPWGKDEVHLSLSLLSIRYYEKMKFKDRPTS
Homology
BLAST of Bhi04G000362 vs. TAIR 10
Match: AT4G24210.1 (F-box family protein )

HSP 1 Score: 164.9 bits (416), Expect = 4.8e-41
Identity = 85/136 (62.50%), Postives = 102/136 (75.00%), Query Frame = 0

Query: 6   KKIKSDSYEQEPESQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAHDERL 65
           KK+KS   E+          F+NLD+NL++EV KHVDA+TLA ++ VSK W KTA DERL
Sbjct: 20  KKMKSTEEEE--------IGFSNLDENLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERL 79

Query: 66  WELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIGCNP---WGKDEVHLSLS 125
           WEL+CT+HWTN+GC   QLRSVVLALGGFRRLHSLY + P+   NP   +GKDE+ L+LS
Sbjct: 80  WELICTRHWTNIGCGQNQLRSVVLALGGFRRLHSLYLW-PLSKPNPRARFGKDELKLTLS 139

Query: 126 LLSIRYYEKMKFKDRP 139
           LLSIRYYEKM F  RP
Sbjct: 140 LLSIRYYEKMSFTKRP 146

BLAST of Bhi04G000362 vs. TAIR 10
Match: AT5G48170.1 (F-box family protein )

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-11
Identity = 41/134 (30.60%), Postives = 76/134 (56.72%), Query Frame = 0

Query: 2   KKKIKKIKSDSYEQEPESQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAH 61
           +K++  ++  + +++  +Q P  +  N   ++L E+ + +D  +L +AA V + W   A 
Sbjct: 4   EKRVGMVEKSNNKRQRVNQVPVFSI-NDHHDVLVEILRRLDGSSLCSAACVCRLWSAVAR 63

Query: 62  DERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIGCNP---WGKDEVH 121
           ++ +WE LC +  +     +  LRSVV ALGG+R L+ L    P++   P   W +D++ 
Sbjct: 64  NDSIWEELCFRQVS--PRPSLSLRSVVSALGGYRCLYFLC-IRPVLARLPKLLWTRDQLQ 123

Query: 122 LSLSLLSIRYYEKM 133
           LSLSL  + YYE++
Sbjct: 124 LSLSLYCVHYYERL 133

BLAST of Bhi04G000362 vs. ExPASy Swiss-Prot
Match: Q9STX3 (F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 6.8e-40
Identity = 85/136 (62.50%), Postives = 102/136 (75.00%), Query Frame = 0

Query: 6   KKIKSDSYEQEPESQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAHDERL 65
           KK+KS   E+          F+NLD+NL++EV KHVDA+TLA ++ VSK W KTA DERL
Sbjct: 20  KKMKSTEEEE--------IGFSNLDENLVYEVLKHVDAKTLAMSSCVSKIWHKTAQDERL 79

Query: 66  WELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIGCNP---WGKDEVHLSLS 125
           WEL+CT+HWTN+GC   QLRSVVLALGGFRRLHSLY + P+   NP   +GKDE+ L+LS
Sbjct: 80  WELICTRHWTNIGCGQNQLRSVVLALGGFRRLHSLYLW-PLSKPNPRARFGKDELKLTLS 139

Query: 126 LLSIRYYEKMKFKDRP 139
           LLSIRYYEKM F  RP
Sbjct: 140 LLSIRYYEKMSFTKRP 146

BLAST of Bhi04G000362 vs. ExPASy Swiss-Prot
Match: Q7XAK4 (F-box protein GID2 OS=Oryza sativa subsp. japonica OX=39947 GN=GID2 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 8.3e-22
Identity = 58/134 (43.28%), Postives = 80/134 (59.70%), Query Frame = 0

Query: 14  EQEPE--SQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAHDERLWELLCT 73
           EQ PE   +       +L ++L+FEV +  +ARTLA AA VS+ W + A DERLWE  C 
Sbjct: 59  EQPPEDAGEGEQPRVPDLGEDLVFEVLRRAEARTLAAAACVSRGWRQLAEDERLWEAACV 118

Query: 74  KHWTNVGCANQQLRSVVLALGGFRRLHSLY--PFSPMIGCNP-----------WGKDEVH 133
           + W N+G + +QLR+VVL+LGGFRRLH++Y  P        P            G+D+V 
Sbjct: 119 REWANLGFSERQLRAVVLSLGGFRRLHAVYIRPLQWRGAGVPRQQGRRQPPVRLGRDQVQ 178

BLAST of Bhi04G000362 vs. ExPASy Swiss-Prot
Match: Q9LUB6 (F-box protein SNE OS=Arabidopsis thaliana OX=3702 GN=SNE PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.3e-10
Identity = 41/134 (30.60%), Postives = 76/134 (56.72%), Query Frame = 0

Query: 2   KKKIKKIKSDSYEQEPESQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAH 61
           +K++  ++  + +++  +Q P  +  N   ++L E+ + +D  +L +AA V + W   A 
Sbjct: 4   EKRVGMVEKSNNKRQRVNQVPVFSI-NDHHDVLVEILRRLDGSSLCSAACVCRLWSAVAR 63

Query: 62  DERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIGCNP---WGKDEVH 121
           ++ +WE LC +  +     +  LRSVV ALGG+R L+ L    P++   P   W +D++ 
Sbjct: 64  NDSIWEELCFRQVS--PRPSLSLRSVVSALGGYRCLYFLC-IRPVLARLPKLLWTRDQLQ 123

Query: 122 LSLSLLSIRYYEKM 133
           LSLSL  + YYE++
Sbjct: 124 LSLSLYCVHYYERL 133

BLAST of Bhi04G000362 vs. NCBI nr
Match: XP_008445558.1 (PREDICTED: F-box protein GID2-like [Cucumis melo] >KAA0060929.1 F-box protein GID2-like [Cucumis melo var. makuwa])

HSP 1 Score: 260.0 bits (663), Expect = 1.2e-65
Identity = 128/143 (89.51%), Postives = 132/143 (92.31%), Query Frame = 0

Query: 1   MKKKIKKIKSDSYEQE--PESQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFK 60
           M  KIKK KSDS +QE   ESQ  PSTFANLDDNLLFEVFKHVDARTLATAAGV+KQWFK
Sbjct: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60

Query: 61  TAHDERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIGCN-PWGKDEV 120
           TAHDERLWELLCTKHWTN+GCANQQLRSVVLALGGFRRLHSLYPF PMIGCN PWGKDEV
Sbjct: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120

Query: 121 HLSLSLLSIRYYEKMKFKDRPTS 141
           HLSLSLLSIRYYEKMKFK+RPTS
Sbjct: 121 HLSLSLLSIRYYEKMKFKNRPTS 143

BLAST of Bhi04G000362 vs. NCBI nr
Match: XP_004143017.1 (F-box protein GID2 [Cucumis sativus] >KGN62476.1 hypothetical protein Csa_018769 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 7.6e-65
Identity = 126/142 (88.73%), Postives = 131/142 (92.25%), Query Frame = 0

Query: 1   MKKKIKKIKSDSYEQEPE-SQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKT 60
           M  +IKK KS S +QEP+ SQ  PSTFANLDDNLLFEVFKHVDARTLAT AGVSKQWFKT
Sbjct: 1   MNNRIKKFKSVSNQQEPDHSQPQPSTFANLDDNLLFEVFKHVDARTLATVAGVSKQWFKT 60

Query: 61  AHDERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIGCN-PWGKDEVH 120
           AHDERLWELLCTKHWTN+GCANQQLRSVVLALGGFRRLHSLYPF PMIGCN PWGKDEVH
Sbjct: 61  AHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEVH 120

Query: 121 LSLSLLSIRYYEKMKFKDRPTS 141
           LSLSLLSIRYYEKMKFK+RPTS
Sbjct: 121 LSLSLLSIRYYEKMKFKNRPTS 142

BLAST of Bhi04G000362 vs. NCBI nr
Match: XP_023522812.1 (F-box protein GID2-like [Cucurbita pepo subsp. pepo] >XP_023547045.1 F-box protein GID2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.4 bits (612), Expect = 9.7e-60
Identity = 117/139 (84.17%), Postives = 123/139 (88.49%), Query Frame = 0

Query: 5   IKKIKSDSYEQEPESQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAHDER 64
           +KKIKS S EQ+    S  S FANLDDNLLFEVFKHVDARTLATAAGVSKQW+KTAHDE 
Sbjct: 1   MKKIKSVSQEQQSPPPSSSSAFANLDDNLLFEVFKHVDARTLATAAGVSKQWYKTAHDEW 60

Query: 65  LWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIG---CNPWGKDEVHLSL 124
           LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPF P+IG   C PWGKDEVHLSL
Sbjct: 61  LWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPVIGSASCIPWGKDEVHLSL 120

Query: 125 SLLSIRYYEKMKFKDRPTS 141
           SLLSIRYYEKMKFK+RPTS
Sbjct: 121 SLLSIRYYEKMKFKNRPTS 139

BLAST of Bhi04G000362 vs. NCBI nr
Match: KAG6598351.1 (F-box protein GID2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029322.1 F-box protein GID2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 236.9 bits (603), Expect = 1.1e-58
Identity = 119/142 (83.80%), Postives = 125/142 (88.03%), Query Frame = 0

Query: 5   IKKIKSDSYEQEPESQSPP---STFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAH 64
           +KKIKS S EQ    QSPP   S FANLDDNLLFEVFKHVDARTLATAAGVSKQW+KTAH
Sbjct: 1   MKKIKSVSEEQ----QSPPPSSSAFANLDDNLLFEVFKHVDARTLATAAGVSKQWYKTAH 60

Query: 65  DERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIG---CNPWGKDEVH 124
           DE LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPF P+IG   C PWGKDE+H
Sbjct: 61  DEWLWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPIIGSASCIPWGKDELH 120

Query: 125 LSLSLLSIRYYEKMKFKDRPTS 141
           LSLSLLSIRYYEKMKFK+RPTS
Sbjct: 121 LSLSLLSIRYYEKMKFKNRPTS 138

BLAST of Bhi04G000362 vs. NCBI nr
Match: XP_022962352.1 (F-box protein GID2-like [Cucurbita moschata])

HSP 1 Score: 233.8 bits (595), Expect = 9.0e-58
Identity = 118/142 (83.10%), Postives = 124/142 (87.32%), Query Frame = 0

Query: 5   IKKIKSDSYEQEPESQSPP---STFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAH 64
           +KKIKS S EQ    QSPP   S FANLDDNLLFEVFKHVDARTLATAAGVSKQW KTAH
Sbjct: 1   MKKIKSVSEEQ----QSPPPSSSAFANLDDNLLFEVFKHVDARTLATAAGVSKQWCKTAH 60

Query: 65  DERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIG---CNPWGKDEVH 124
           DE LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPF P++G   C PWGKDE+H
Sbjct: 61  DEWLWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPIMGSASCIPWGKDELH 120

Query: 125 LSLSLLSIRYYEKMKFKDRPTS 141
           LSLSLLSIRYYEKMKFK+RPTS
Sbjct: 121 LSLSLLSIRYYEKMKFKNRPTS 138

BLAST of Bhi04G000362 vs. ExPASy TrEMBL
Match: A0A5A7V5E1 (F-box protein GID2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00620 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.7e-66
Identity = 128/143 (89.51%), Postives = 132/143 (92.31%), Query Frame = 0

Query: 1   MKKKIKKIKSDSYEQE--PESQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFK 60
           M  KIKK KSDS +QE   ESQ  PSTFANLDDNLLFEVFKHVDARTLATAAGV+KQWFK
Sbjct: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60

Query: 61  TAHDERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIGCN-PWGKDEV 120
           TAHDERLWELLCTKHWTN+GCANQQLRSVVLALGGFRRLHSLYPF PMIGCN PWGKDEV
Sbjct: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120

Query: 121 HLSLSLLSIRYYEKMKFKDRPTS 141
           HLSLSLLSIRYYEKMKFK+RPTS
Sbjct: 121 HLSLSLLSIRYYEKMKFKNRPTS 143

BLAST of Bhi04G000362 vs. ExPASy TrEMBL
Match: A0A1S3BDV6 (F-box protein GID2-like OS=Cucumis melo OX=3656 GN=LOC103488538 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.7e-66
Identity = 128/143 (89.51%), Postives = 132/143 (92.31%), Query Frame = 0

Query: 1   MKKKIKKIKSDSYEQE--PESQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFK 60
           M  KIKK KSDS +QE   ESQ  PSTFANLDDNLLFEVFKHVDARTLATAAGV+KQWFK
Sbjct: 1   MNNKIKKFKSDSNQQEKPDESQPQPSTFANLDDNLLFEVFKHVDARTLATAAGVNKQWFK 60

Query: 61  TAHDERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIGCN-PWGKDEV 120
           TAHDERLWELLCTKHWTN+GCANQQLRSVVLALGGFRRLHSLYPF PMIGCN PWGKDEV
Sbjct: 61  TAHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEV 120

Query: 121 HLSLSLLSIRYYEKMKFKDRPTS 141
           HLSLSLLSIRYYEKMKFK+RPTS
Sbjct: 121 HLSLSLLSIRYYEKMKFKNRPTS 143

BLAST of Bhi04G000362 vs. ExPASy TrEMBL
Match: A0A0A0LR75 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G355020 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 3.7e-65
Identity = 126/142 (88.73%), Postives = 131/142 (92.25%), Query Frame = 0

Query: 1   MKKKIKKIKSDSYEQEPE-SQSPPSTFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKT 60
           M  +IKK KS S +QEP+ SQ  PSTFANLDDNLLFEVFKHVDARTLAT AGVSKQWFKT
Sbjct: 1   MNNRIKKFKSVSNQQEPDHSQPQPSTFANLDDNLLFEVFKHVDARTLATVAGVSKQWFKT 60

Query: 61  AHDERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIGCN-PWGKDEVH 120
           AHDERLWELLCTKHWTN+GCANQQLRSVVLALGGFRRLHSLYPF PMIGCN PWGKDEVH
Sbjct: 61  AHDERLWELLCTKHWTNLGCANQQLRSVVLALGGFRRLHSLYPFPPMIGCNHPWGKDEVH 120

Query: 121 LSLSLLSIRYYEKMKFKDRPTS 141
           LSLSLLSIRYYEKMKFK+RPTS
Sbjct: 121 LSLSLLSIRYYEKMKFKNRPTS 142

BLAST of Bhi04G000362 vs. ExPASy TrEMBL
Match: A0A6J1HCI1 (F-box protein GID2-like OS=Cucurbita moschata OX=3662 GN=LOC111462823 PE=4 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 4.4e-58
Identity = 118/142 (83.10%), Postives = 124/142 (87.32%), Query Frame = 0

Query: 5   IKKIKSDSYEQEPESQSPP---STFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAH 64
           +KKIKS S EQ    QSPP   S FANLDDNLLFEVFKHVDARTLATAAGVSKQW KTAH
Sbjct: 1   MKKIKSVSEEQ----QSPPPSSSAFANLDDNLLFEVFKHVDARTLATAAGVSKQWCKTAH 60

Query: 65  DERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIG---CNPWGKDEVH 124
           DE LWELLCTKHW N+GCANQQLRSVVLALGGFRRLHSLYPF P++G   C PWGKDE+H
Sbjct: 61  DEWLWELLCTKHWANIGCANQQLRSVVLALGGFRRLHSLYPFPPIMGSASCIPWGKDELH 120

Query: 125 LSLSLLSIRYYEKMKFKDRPTS 141
           LSLSLLSIRYYEKMKFK+RPTS
Sbjct: 121 LSLSLLSIRYYEKMKFKNRPTS 138

BLAST of Bhi04G000362 vs. ExPASy TrEMBL
Match: A0A6J1K7I7 (F-box protein GID2-like OS=Cucurbita maxima OX=3661 GN=LOC111491869 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 116/142 (81.69%), Postives = 122/142 (85.92%), Query Frame = 0

Query: 5   IKKIKSDSYEQEPESQSPP---STFANLDDNLLFEVFKHVDARTLATAAGVSKQWFKTAH 64
           +KKIKS S EQ    QSPP   S FANLDDNLLFEVFKHVDARTLATA+GVSKQW+KTAH
Sbjct: 1   MKKIKSVSQEQ----QSPPPSSSAFANLDDNLLFEVFKHVDARTLATASGVSKQWYKTAH 60

Query: 65  DERLWELLCTKHWTNVGCANQQLRSVVLALGGFRRLHSLYPFSPMIG---CNPWGKDEVH 124
           DE LWELLCTKHW N+GCAN QLRSVVLALGGFRRLHSLYPF P+IG   C  WGK EVH
Sbjct: 61  DEWLWELLCTKHWANIGCANPQLRSVVLALGGFRRLHSLYPFPPIIGSASCIAWGKGEVH 120

Query: 125 LSLSLLSIRYYEKMKFKDRPTS 141
           LSLSLLSIRYYEKMKFK+RPTS
Sbjct: 121 LSLSLLSIRYYEKMKFKNRPTS 138

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT4G24210.14.8e-4162.50F-box family protein [more]
AT5G48170.12.3e-1130.60F-box family protein [more]
Match NameE-valueIdentityDescription
Q9STX36.8e-4062.50F-box protein GID2 OS=Arabidopsis thaliana OX=3702 GN=GID2 PE=1 SV=1[more]
Q7XAK48.3e-2243.28F-box protein GID2 OS=Oryza sativa subsp. japonica OX=39947 GN=GID2 PE=1 SV=1[more]
Q9LUB63.3e-1030.60F-box protein SNE OS=Arabidopsis thaliana OX=3702 GN=SNE PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_008445558.11.2e-6589.51PREDICTED: F-box protein GID2-like [Cucumis melo] >KAA0060929.1 F-box protein GI... [more]
XP_004143017.17.6e-6588.73F-box protein GID2 [Cucumis sativus] >KGN62476.1 hypothetical protein Csa_018769... [more]
XP_023522812.19.7e-6084.17F-box protein GID2-like [Cucurbita pepo subsp. pepo] >XP_023547045.1 F-box prote... [more]
KAG6598351.11.1e-5883.80F-box protein GID2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029322.... [more]
XP_022962352.19.0e-5883.10F-box protein GID2-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A5A7V5E15.7e-6689.51F-box protein GID2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A1S3BDV65.7e-6689.51F-box protein GID2-like OS=Cucumis melo OX=3656 GN=LOC103488538 PE=4 SV=1[more]
A0A0A0LR753.7e-6588.73F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G355020 PE=4 ... [more]
A0A6J1HCI14.4e-5883.10F-box protein GID2-like OS=Cucurbita moschata OX=3662 GN=LOC111462823 PE=4 SV=1[more]
A0A6J1K7I71.1e-5681.69F-box protein GID2-like OS=Cucurbita maxima OX=3661 GN=LOC111491869 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 29..69
e-value: 0.0031
score: 26.7
IPR001810F-box domainPFAMPF00646F-boxcoord: 25..70
e-value: 1.1E-6
score: 28.4
IPR001810F-box domainPROSITEPS50181FBOXcoord: 23..69
score: 9.709425
NoneNo IPR availableGENE3D1.20.1280.50coord: 11..107
e-value: 2.3E-11
score: 45.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availablePANTHERPTHR12874:SF22F-BOX PROTEIN GID2-LIKEcoord: 107..135
coord: 12..100
IPR045118F-box only protein FBXO9/FBXO48PANTHERPTHR12874F-BOX ONLY PROTEIN 48-RELATEDcoord: 107..135
coord: 12..100
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 18..75

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000362Bhi04M000362mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009740 gibberellic acid mediated signaling pathway
biological_process GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process
cellular_component GO:0019005 SCF ubiquitin ligase complex
molecular_function GO:0005515 protein binding