Bhi04G000255 (gene) Wax gourd (B227) v1

Overview
NameBhi04G000255
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionBnaC09g29120D protein
Locationchr4: 6702687 .. 6703664 (-)
RNA-Seq ExpressionBhi04G000255
SyntenyBhi04G000255
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCAGCTGCATACATCACTGCACTTTCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGATCTTCTCTTGAATTCTCAAAACTTCTGTCGTTCCATCCCCGCAGGGGCAGAAAACTCATTGCTGTCTCAGTTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATTTTGAGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCTGCACTTGGCTACCCAGCGTTTACCGTGGGTATGATAACTGGTACACTAGAGGTGTGTCCTTCCCGGGCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAACCGACATCGATGTGAGCTCTTGGGGAAGATCAGCTTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGACAGTCTTTCCACTCAACATCGTCGAATAACTAAGGTCGACTTTCGTCCCTGATCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTACCTTTGCACTCGAGGGCTAATCTTCGTCTGGCCCGAGGAAACCTTTGCACGCCTCTGTTACCTTTTAGAAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCTTGACACAAGGTTAGAATTCTAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCAGAAGGGGGTCTTCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCACATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCTGAGACAGTGCCCAGATCGTTACG

mRNA sequence

ATGCCTCAGCTGCATACATCACTGCACTTTCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGATCTTCTCTTGAATTCTCAAAACTTCTGTCGTTCCATCCCCGCAGGGGCAGAAAACTCATTGCTGTCTCAGTTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATTTTGAGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCTGCACTTGGCTACCCAGCGTTTACCGTGGGTATGATAACTGGTACACTAGAGGTGTGTCCTTCCCGGGCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGACCGAACTGTCTCACGACGTTCTAAACCCAACTCACGTACCGCTTTAATGGGCGAACAACCCAACCCTTGGAACATACTACAGCCCCAGGTGGCGAAGAACCGACATCGATGTGAGCTCTTGGGGAAGATCAGCTTGTTATCCCTAGAGTAACTTTTATCCGTTGAGCGACAGTCTTTCCACTCAACATCGTCGAATAACTAAGGTCGACTTTCGTCCCTGATCGACGGGTGGGTCTTGCAGTCAAGCTCCCTTCTACCTTTGCACTCGAGGGCTAATCTTCGTCTGGCCCGAGGAAACCTTTGCACGCCTCTGTTACCTTTTAGAAGGCCTACGCCCCATAGAAACTGTCTACCTGAGACTGTCCCTTGGCCCGTAGGTCTTGACACAAGGTTAGAATTCTAGCTCTTCCAGAGTGGTATCTCACTGATGGCTCGGGCCCCCCCAGAAGGGGGTCTTCTTCGCCTTCCACCTAAGCTGCGCAGGAAAGGCCCAAAGCCAATCCCAGGGAACAGTGAAGCTTCATAGGGTCTTTCTGTCCAGGTGCAGGTAGTCCACATCTTCACAGACATGTCTATTTCACCGAGCCTCTCTCTGAGACAGTGCCCAGATCGTTACG

Coding sequence (CDS)

ATGCCTCAGCTGCATACATCACTGCACTTTCACTTGACACCTATCGTGATGATAAACGGCTCATCTCGCCGTGATCTTCTCTTGAATTCTCAAAACTTCTGTCGTTCCATCCCCGCAGGGGCAGAAAACTCATTGCTGTCTCAGTTGTGCTACCGGAGGCTCTGGGGAAGTCGGAATAGGAGAGCACTCATTTTGAGGTGGGCTTACTACTTAGATGCTTTCAGCAGTTATCCGCTCTGCACTTGGCTACCCAGCGTTTACCGTGGGTATGATAACTGGTACACTAGAGGTGTGTCCTTCCCGGGCCTCTCGTACTAG

Protein sequence

MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENSLLSQLCYRRLWGSRNRRALILRWAYYLDAFSSYPLCTWLPSVYRGYDNWYTRGVSFPGLSY
Homology
[Close]
BLAST of Bhi04G000255 vs. NCBI nr
Match: CAA7019114.1 (unnamed protein product [Microthlaspi erraticum] >CAA7021346.1 unnamed protein product [Microthlaspi erraticum] >CAA7024571.1 unnamed protein product [Microthlaspi erraticum])

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 

Query: 1   MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENSLLSQLCYRRLWGSRNR 60
           MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC SIPAGAEN LLS+LCYRRLWGSRNR
Sbjct: 72  MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCHSIPAGAENPLLSRLCYRRLWGSRNR 131

Query: 61  RALILRWAYYLDAFSSYPLCTWLPSVYRGYDNWYTRGVSFPGLSY 106
           RALIL WAYYLDAFSSYPL TWLPSVYRG+DNWYTRG SFP LSY
Sbjct: 132 RALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 176

[Close]
BLAST of Bhi04G000255 vs. NCBI nr
Match: KAF3545667.1 (hypothetical protein DY000_02000220 [Brassica cretica] >KAG7528873.1 hypothetical protein ISN44_Un153g000050 [Arabidopsis suecica] >KAG7529054.1 hypothetical protein ISN45_Un101g000070 [Arabidopsis thaliana x Arabidopsis arenosa] >CAA7013172.1 unnamed protein product [Microthlaspi erraticum] >CAF1752533.1 unnamed protein product [Brassica napus] >VDD22504.1 unnamed protein product [Brassica rapa] >VDD65588.1 unnamed protein product [Brassica oleracea])

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 

Query: 1   MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENSLLSQLCYRRLWGSRNR 60
           MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC SIPAGAEN LLS+LCYRRLWGSRNR
Sbjct: 27  MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCHSIPAGAENPLLSRLCYRRLWGSRNR 86

Query: 61  RALILRWAYYLDAFSSYPLCTWLPSVYRGYDNWYTRGVSFPGLSY 106
           RALIL WAYYLDAFSSYPL TWLPSVYRG+DNWYTRG SFP LSY
Sbjct: 87  RALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 131

[Close]
BLAST of Bhi04G000255 vs. NCBI nr
Match: VDD26000.1 (unnamed protein product, partial [Brassica rapa])

HSP 1 Score: 206.1 bits (523), Expect = 1.5e-49
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 

Query: 1   MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENSLLSQLCYRRLWGSRNR 60
           MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC SIPAGAEN LLS+LCYRRLWGSRNR
Sbjct: 26  MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCHSIPAGAENPLLSRLCYRRLWGSRNR 85

Query: 61  RALILRWAYYLDAFSSYPLCTWLPSVYRGYDNWYTRGVSFPGLSY 106
           RALIL WAYYLDAFSSYPL TWLPSVYRG+DNWYTRG SFP LSY
Sbjct: 86  RALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 130

[Close]
BLAST of Bhi04G000255 vs. NCBI nr
Match: KAB1210637.1 (hypothetical protein CJ030_MR6G010321 [Morella rubra] >KAB1226196.1 hypothetical protein CJ030_MR1G029169 [Morella rubra])

HSP 1 Score: 205.7 bits (522), Expect = 2.0e-49
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 

Query: 1   MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENSLLSQLCYRRLWGSRNR 60
           MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAEN  LS+LCYRRLWGSRNR
Sbjct: 27  MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENPSLSRLCYRRLWGSRNR 86

Query: 61  RALILRWAYYLDAFSSYPLCTWLPSVYRGYDNWYTRGVSFPGLSY 106
           RALIL WAYYLDAFSSYPL TWLPSVYRG+DNWYTRG SFP LSY
Sbjct: 87  RALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 131

[Close]
BLAST of Bhi04G000255 vs. NCBI nr
Match: PLY71578.1 (hypothetical protein LSAT_1X88180 [Lactuca sativa] >PLY72081.1 hypothetical protein LSAT_9X121741 [Lactuca sativa] >PLY94770.1 hypothetical protein LSAT_2X97121 [Lactuca sativa] >PWA75058.1 hypothetical protein CTI12_AA247900 [Artemisia annua])

HSP 1 Score: 205.7 bits (522), Expect = 2.0e-49
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 

Query: 1   MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENSLLSQLCYRRLWGSRNR 60
           MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAEN  LS+LCYRRLWGSRNR
Sbjct: 27  MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENPSLSRLCYRRLWGSRNR 86

Query: 61  RALILRWAYYLDAFSSYPLCTWLPSVYRGYDNWYTRGVSFPGLSY 106
           RALIL WAYYLDAFSSYPL TWLPSVYRG+DNWYTRG SFP LSY
Sbjct: 87  RALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 131

[Close]
BLAST of Bhi04G000255 vs. ExPASy TrEMBL
Match: A0A3P6DE57 (Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC103T45422Z PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.3e-50
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 

Query: 1   MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENSLLSQLCYRRLWGSRNR 60
           MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC SIPAGAEN LLS+LCYRRLWGSRNR
Sbjct: 27  MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCHSIPAGAENPLLSRLCYRRLWGSRNR 86

Query: 61  RALILRWAYYLDAFSSYPLCTWLPSVYRGYDNWYTRGVSFPGLSY 106
           RALIL WAYYLDAFSSYPL TWLPSVYRG+DNWYTRG SFP LSY
Sbjct: 87  RALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 131

[Close]
BLAST of Bhi04G000255 vs. ExPASy TrEMBL
Match: A0A078G2W2 (BnaC09g29120D protein OS=Brassica napus OX=3708 GN=BnaC09g29120D PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.3e-50
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 

Query: 1   MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENSLLSQLCYRRLWGSRNR 60
           MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC SIPAGAEN LLS+LCYRRLWGSRNR
Sbjct: 27  MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCHSIPAGAENPLLSRLCYRRLWGSRNR 86

Query: 61  RALILRWAYYLDAFSSYPLCTWLPSVYRGYDNWYTRGVSFPGLSY 106
           RALIL WAYYLDAFSSYPL TWLPSVYRG+DNWYTRG SFP LSY
Sbjct: 87  RALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 131

[Close]
BLAST of Bhi04G000255 vs. ExPASy TrEMBL
Match: A0A3P6H2B0 (Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC44T60816H PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.3e-50
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 

Query: 1   MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENSLLSQLCYRRLWGSRNR 60
           MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC SIPAGAEN LLS+LCYRRLWGSRNR
Sbjct: 27  MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCHSIPAGAENPLLSRLCYRRLWGSRNR 86

Query: 61  RALILRWAYYLDAFSSYPLCTWLPSVYRGYDNWYTRGVSFPGLSY 106
           RALIL WAYYLDAFSSYPL TWLPSVYRG+DNWYTRG SFP LSY
Sbjct: 87  RALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 131

[Close]
BLAST of Bhi04G000255 vs. ExPASy TrEMBL
Match: A0A6D2IEW4 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS11806 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.3e-50
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 

Query: 1   MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENSLLSQLCYRRLWGSRNR 60
           MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC SIPAGAEN LLS+LCYRRLWGSRNR
Sbjct: 72  MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCHSIPAGAENPLLSRLCYRRLWGSRNR 131

Query: 61  RALILRWAYYLDAFSSYPLCTWLPSVYRGYDNWYTRGVSFPGLSY 106
           RALIL WAYYLDAFSSYPL TWLPSVYRG+DNWYTRG SFP LSY
Sbjct: 132 RALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 176

[Close]
BLAST of Bhi04G000255 vs. ExPASy TrEMBL
Match: A0A6D2JNL0 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS10051 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.3e-50
Identity = 97/105 (92.38%), Postives = 99/105 (94.29%), Query Frame = 0 

Query: 1   MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCRSIPAGAENSLLSQLCYRRLWGSRNR 60
           MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFC SIPAGAEN LLS+LCYRRLWGSRNR
Sbjct: 27  MPQLHTSLHFHLTPIVMINGSSRRDLLLNSQNFCHSIPAGAENPLLSRLCYRRLWGSRNR 86

Query: 61  RALILRWAYYLDAFSSYPLCTWLPSVYRGYDNWYTRGVSFPGLSY 106
           RALIL WAYYLDAFSSYPL TWLPSVYRG+DNWYTRG SFP LSY
Sbjct: 87  RALILGWAYYLDAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 131

The following BLAST results are available for this feature:
BLAST of Bhi04G000255 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G000255 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G000255 vs. NCBI nr
Match NameE-valueIdentityDescription
CAA7019114.11.5e-4992.38unnamed protein product [Microthlaspi erraticum] >CAA7021346.1 unnamed protein p... [more]
KAF3545667.11.5e-4992.38hypothetical protein DY000_02000220 [Brassica cretica] >KAG7528873.1 hypothetica... [more]
VDD26000.11.5e-4992.38unnamed protein product, partial [Brassica rapa][more]
KAB1210637.12.0e-4992.38hypothetical protein CJ030_MR6G010321 [Morella rubra] >KAB1226196.1 hypothetical... [more]
PLY71578.12.0e-4992.38hypothetical protein LSAT_1X88180 [Lactuca sativa] >PLY72081.1 hypothetical prot... [more]
BLAST of Bhi04G000255 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A3P6DE577.3e-5092.38Uncharacterized protein OS=Brassica campestris OX=3711 GN=BRASC103T45422Z PE=4 S... [more]
A0A078G2W27.3e-5092.38BnaC09g29120D protein OS=Brassica napus OX=3708 GN=BnaC09g29120D PE=4 SV=1[more]
A0A3P6H2B07.3e-5092.38Uncharacterized protein OS=Brassica oleracea OX=3712 GN=BOLSC44T60816H PE=4 SV=1[more]
A0A6D2IEW47.3e-5092.38Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS11806 ... [more]
A0A6D2JNL07.3e-5092.38Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS10051 ... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000255Bhi04M000255mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding