Bhi04G000251 (gene) Wax gourd (B227) v1

Overview
NameBhi04G000251
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionRING-type domain-containing protein
Locationchr4: 6663794 .. 6664954 (+)
RNA-Seq ExpressionBhi04G000251
SyntenyBhi04G000251
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTTGACATTTGACAATTTCTGTTCCTTTAAGAACAAACACTGTATTTGACGACGGACTTCTATGAACTAAAGTATCAACATCTTCCTCTTCTCTCTGTGCAAACTACAACTACAAAAAGAAAACTTTACAGTGATACCCCATTCCCATCAAAACAAAAACATGAACAGAGCAAAACCCATTTCAGAAATTCGCAGGCTTCTTATAAATCAAACCCGAACAATTTTCCTTGTAGAATTTCACGAACAGCAAAAGGATAACGGAATTAAGCACAGAATTGCAAGCCCAAGCGCCAATGCCGTTGCACCCGCCTTTCAGAACGTGAAATGAATACATCCCAAGATGATAGAGCAAGTTACAGGAAAGAAGAGCAGCTTGGCAATTAAGTACGAACGGGAAGCAGGCGGCCGGGAGCCCGACGGCGGTCAAGAATCGGTAACCATAGACGAGGGTATGGAGGAGGGTAGTGGAGAGAATGGCGAGAATTTGAAAAGACTGTGCGAATTCGAGCCAGAGGAAGGAAGTGAGGATGAGGATGGAATGATTGAAGAGGTGGAACAATGGGAGGCGACGGCAGCGGAGGACGGTGAAAAAGGTGCGGAGGAGATGGAGGTATCGAGAGAGGTAAAAAATGTACGACCAGAAGAACACGCGCCCGGAGGGGCGAGTGCCAATTGGAAAACAGAGCAGCCATTGAAATGGGGTGGTTCTGGTTCTGCTCCGTCGCCAGAGCCACCGGGTGTCACGAATCTCGGCCGCAGCGGAGAAGAGGATACCAGCGAAGATGACGGCGGAGATTACAGCCATGGAGAGACTGTGAACGGCCGGAATCAGGCCGAGTGGGACCGGGCGATCGCGGCGGAGGAGGATCGTAGAAAGACGGAGGAAGACGGCGGCGAGGAGGTAGAGCGTGACGGTGCCGACGAGGAAAGACCACGTGGAGCCCCATGATTGGGAGTGGCTCCATCTGAAATTGACAATGGAAGGGTGCTCCGACAGCCAGTATCGAGAAACCGTCGGCATTGTAATTTTGGGGGCTTTCACAATCAAAACAATTTGAGTACATTATATATATAAAAAAACTACTGAAGATGGAAATTACATAAATTTATTATTTGTTTTGAAAATGGAAAAATATGAATATTAAATTTAAATTAGAC

mRNA sequence

CTTTTTGACATTTGACAATTTCTGTTCCTTTAAGAACAAACACTGTATTTGACGACGGACTTCTATGAACTAAAGTATCAACATCTTCCTCTTCTCTCTGTGCAAACTACAACTACAAAAAGAAAACTTTACAGTGATACCCCATTCCCATCAAAACAAAAACATGAACAGAGCAAAACCCATTTCAGAAATTCGCAGGCTTCTTATAAATCAAACCCGAACAATTTTCCTTGTAGAATTTCACGAACAGCAAAAGGATAACGGAATTAAGCACAGAATTGCAAGCCCAAGCGCCAATGCCGTTGCACCCGCCTTTCAGAACGTGAAATGAATACATCCCAAGATGATAGAGCAAGTTACAGGAAAGAAGAGCAGCTTGGCAATTAAGTACGAACGGGAAGCAGGCGGCCGGGAGCCCGACGGCGGTCAAGAATCGGTAACCATAGACGAGGGTATGGAGGAGGGTAGTGGAGAGAATGGCGAGAATTTGAAAAGACTGTGCGAATTCGAGCCAGAGGAAGGAAGTGAGGATGAGGATGGAATGATTGAAGAGGTGGAACAATGGGAGGCGACGGCAGCGGAGGACGGTGAAAAAGGTGCGGAGGAGATGGAGGTATCGAGAGAGGTAAAAAATGTACGACCAGAAGAACACGCGCCCGGAGGGGCGAGTGCCAATTGGAAAACAGAGCAGCCATTGAAATGGGGTGGTTCTGGTTCTGCTCCGTCGCCAGAGCCACCGGGTGTCACGAATCTCGGCCGCAGCGGAGAAGAGGATACCAGCGAAGATGACGGCGGAGATTACAGCCATGGAGAGACTGTGAACGGCCGGAATCAGGCCGAGTGGGACCGGGCGATCGCGGCGGAGGAGGATCGTAGAAAGACGGAGGAAGACGGCGGCGAGGAGGTAGAGCGTGACGGTGCCGACGAGGAAAGACCACGTGGAGCCCCATGATTGGGAGTGGCTCCATCTGAAATTGACAATGGAAGGGTGCTCCGACAGCCAGTATCGAGAAACCGTCGGCATTGTAATTTTGGGGGCTTTCACAATCAAAACAATTTGAGTACATTATATATATAAAAAAACTACTGAAGATGGAAATTACATAAATTTATTATTTGTTTTGAAAATGGAAAAATATGAATATTAAATTTAAATTAGAC

Coding sequence (CDS)

ATGATAGAGCAAGTTACAGGAAAGAAGAGCAGCTTGGCAATTAAGTACGAACGGGAAGCAGGCGGCCGGGAGCCCGACGGCGGTCAAGAATCGGTAACCATAGACGAGGGTATGGAGGAGGGTAGTGGAGAGAATGGCGAGAATTTGAAAAGACTGTGCGAATTCGAGCCAGAGGAAGGAAGTGAGGATGAGGATGGAATGATTGAAGAGGTGGAACAATGGGAGGCGACGGCAGCGGAGGACGGTGAAAAAGGTGCGGAGGAGATGGAGGTATCGAGAGAGGTAAAAAATGTACGACCAGAAGAACACGCGCCCGGAGGGGCGAGTGCCAATTGGAAAACAGAGCAGCCATTGAAATGGGGTGGTTCTGGTTCTGCTCCGTCGCCAGAGCCACCGGGTGTCACGAATCTCGGCCGCAGCGGAGAAGAGGATACCAGCGAAGATGACGGCGGAGATTACAGCCATGGAGAGACTGTGAACGGCCGGAATCAGGCCGAGTGGGACCGGGCGATCGCGGCGGAGGAGGATCGTAGAAAGACGGAGGAAGACGGCGGCGAGGAGGTAGAGCGTGACGGTGCCGACGAGGAAAGACCACGTGGAGCCCCATGA

Protein sequence

MIEQVTGKKSSLAIKYEREAGGREPDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEGSEDEDGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKWGGSGSAPSPEPPGVTNLGRSGEEDTSEDDGGDYSHGETVNGRNQAEWDRAIAAEEDRRKTEEDGGEEVERDGADEERPRGAP
Homology
BLAST of Bhi04G000251 vs. NCBI nr
Match: KAF7817551.1 (hypothetical protein G2W53_031520 [Senna tora])

HSP 1 Score: 140.2 bits (352), Expect = 2.0e-29
Identity = 87/202 (43.07%), Postives = 126/202 (62.38%), Query Frame = 0

Query: 1   MIEQVTGKKSSLAIKYEREAGGREPDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEG 60
           M   +  ++  LAI+ E EA   + D   E+V IDEG++E   EN  +LK L +FEPEEG
Sbjct: 82  MAHHIGSQEQHLAIESEGEACAGQADLPPETVGIDEGVKESGNENSHDLKGLGKFEPEEG 141

Query: 61  SEDEDGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKW 120
            E E+GM+E+ E+ E   A++GE+GAEE+E +REV++V PEE    G S+ W+ E+P + 
Sbjct: 142 HEKENGMVEKPEEGEVAVAKNGEEGAEEVEEAREVEDVGPEEDRARGTSSKWEAEEPFEG 201

Query: 121 GGSGSAPSPEPPGVTNLGRSGEEDTSEDDGGDYSHGETVNGRNQAEWDRAIAAEEDRRKT 180
            GSGS  +PEP G+ + G SGEED  ED+  +  H + V+GR+ A+ D          + 
Sbjct: 202 SGSGSGSTPEPAGMADFGVSGEEDAKEDEEREDGHEKAVDGRDGAQGDATTPTPHTEEQV 261

Query: 181 EEDGGEEVERDGADEERPRGAP 203
           E++GG+ V  DG D+E P GAP
Sbjct: 262 EQEGGDHVGGDGVDQEVPGGAP 283

BLAST of Bhi04G000251 vs. NCBI nr
Match: POO02602.1 (hypothetical protein TorRG33x02_015860 [Trema orientale])

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-19
Identity = 81/190 (42.63%), Postives = 108/190 (56.84%), Query Frame = 0

Query: 5   VTGKKSSLAIKYEREAGGREPDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEGSEDE 64
           V  ++  LA   E EA   E +GG E+V +D G+ E  GE GE+L+RL E EPEE  E E
Sbjct: 86  VAAEQRDLARDDEGEARAAEAEGGPEAVAVDGGVGERGGEYGEHLERLGELEPEERHEGE 145

Query: 65  DGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKWGGSG 124
           D ++EE+ + +  A  DGE+ AE +E + EV  V PEE    GA    + E+PL+ G   
Sbjct: 146 DRLVEELAKRQPAAPCDGEERAEHVEEAGEVVEVGPEEDPTRGAGPEREAEEPLERGPEP 205

Query: 125 SAPS--PEPPGVTNLGRSGEEDTSEDDGGDYSHGETVNGRNQAEWDRAIAAEEDRRKTEE 184
             P+  PEPP V +LG  GEE + ED GGD  H E V+G + A+ DRA          EE
Sbjct: 206 GRPAAEPEPPRVADLGGGGEECSGEDRGGDQGHREAVDGGDGAQGDRAAVV------VEE 265

Query: 185 DGGEEVERDG 193
           +G  EVE +G
Sbjct: 266 EGEGEVEEEG 269

BLAST of Bhi04G000251 vs. NCBI nr
Match: RAL40495.1 (hypothetical protein DM860_006565 [Cuscuta australis])

HSP 1 Score: 102.4 bits (254), Expect = 4.5e-18
Identity = 71/172 (41.28%), Postives = 99/172 (57.56%), Query Frame = 0

Query: 25  PDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEGSEDEDGMIEEVEQWEATAAEDGEK 84
           P   QE   +  G  E  GE+  +L+RL E +PEEG   EDG++EEVE  EA   +D + 
Sbjct: 145 PHVPQEPAPVHGGEPESGGEDRHHLERLGELQPEEGHAYEDGVVEEVEGREAAPPQDHQV 204

Query: 85  GAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKWGGSGSAPSPEPPGVTNLGRSGEED 144
           GA+ +E +  V+ VRPE+    G+  + KT++PL+  G G  P P PP V + G  G E 
Sbjct: 205 GAQHVEEAGHVERVRPEKDPTRGSGPHGKTQEPLE-RGRGPGPLPHPPRVADFGCGGGEG 264

Query: 145 TSEDDGGDYSHGETVNGRNQAEWDRAIAAEEDRRKTEEDGGEEVERDGADEE 197
             ED GGD  HGE + GR  A+ D A + EE+  + E  GG++V  DG DE+
Sbjct: 265 PEEDGGGDEGHGEAMEGREAADGDGAASDEEEEEEVEGGGGDDVGGDGGDEK 315

BLAST of Bhi04G000251 vs. NCBI nr
Match: KAA8537673.1 (hypothetical protein F0562_027337 [Nyssa sinensis])

HSP 1 Score: 89.4 bits (220), Expect = 4.0e-14
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 0

Query: 89  MEVSREVKNVRPEEHAPGGASANWKTEQPLKWGGSGSAPSPEPPGVTNLGRSGEEDTSED 148
           ME +REV++V PEE APGG  A  + E+PL+W   G    PEP GV NLG  G ED  ED
Sbjct: 1   MEEAREVEDVGPEEDAPGGTRAEGEAEKPLEW---GFGAVPEPSGVANLGVGGGEDADED 60

Query: 149 DGGDYSHGETVNGRNQAEWDRAIAAEEDRRKTEEDG 185
            GGD SHGE V GR+ AEWD + +AEE+  + E +G
Sbjct: 61  GGGDESHGEAVEGRDGAEWDGSASAEEEEDEREREG 93

BLAST of Bhi04G000251 vs. NCBI nr
Match: OMP10082.1 (hypothetical protein COLO4_04842 [Corchorus olitorius])

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-13
Identity = 50/111 (45.05%), Postives = 74/111 (66.67%), Query Frame = 0

Query: 56  EPEEGSEDEDGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTE 115
           +P++  + + G++EEVE+ +++  ED +  +E +E +REVK+VRPEE A G A +  +TE
Sbjct: 11  QPKKRHDRQYGVVEEVEEGQSSTPEDDDDRSEHVEETREVKDVRPEEDAAGRAGSEGETE 70

Query: 116 QPLKWGGSGSAPSPEPPGVTNLGRSGEEDTSEDDGGDYSHGETVNGRNQAE 167
           +PL+W   G   +PEPPG  +    GEED+ EDDGGD  HGE V GR+  E
Sbjct: 71  EPLEW---GLGTAPEPPGFLDFSGGGEEDSGEDDGGDDGHGEAVEGRDWTE 118

BLAST of Bhi04G000251 vs. ExPASy TrEMBL
Match: A0A2P5FXT1 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_015860 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 8.9e-20
Identity = 81/190 (42.63%), Postives = 108/190 (56.84%), Query Frame = 0

Query: 5   VTGKKSSLAIKYEREAGGREPDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEGSEDE 64
           V  ++  LA   E EA   E +GG E+V +D G+ E  GE GE+L+RL E EPEE  E E
Sbjct: 86  VAAEQRDLARDDEGEARAAEAEGGPEAVAVDGGVGERGGEYGEHLERLGELEPEERHEGE 145

Query: 65  DGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKWGGSG 124
           D ++EE+ + +  A  DGE+ AE +E + EV  V PEE    GA    + E+PL+ G   
Sbjct: 146 DRLVEELAKRQPAAPCDGEERAEHVEEAGEVVEVGPEEDPTRGAGPEREAEEPLERGPEP 205

Query: 125 SAPS--PEPPGVTNLGRSGEEDTSEDDGGDYSHGETVNGRNQAEWDRAIAAEEDRRKTEE 184
             P+  PEPP V +LG  GEE + ED GGD  H E V+G + A+ DRA          EE
Sbjct: 206 GRPAAEPEPPRVADLGGGGEECSGEDRGGDQGHREAVDGGDGAQGDRAAVV------VEE 265

Query: 185 DGGEEVERDG 193
           +G  EVE +G
Sbjct: 266 EGEGEVEEEG 269

BLAST of Bhi04G000251 vs. ExPASy TrEMBL
Match: A0A328D458 (Uncharacterized protein OS=Cuscuta australis OX=267555 GN=DM860_006565 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 2.2e-18
Identity = 71/172 (41.28%), Postives = 99/172 (57.56%), Query Frame = 0

Query: 25  PDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEGSEDEDGMIEEVEQWEATAAEDGEK 84
           P   QE   +  G  E  GE+  +L+RL E +PEEG   EDG++EEVE  EA   +D + 
Sbjct: 145 PHVPQEPAPVHGGEPESGGEDRHHLERLGELQPEEGHAYEDGVVEEVEGREAAPPQDHQV 204

Query: 85  GAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKWGGSGSAPSPEPPGVTNLGRSGEED 144
           GA+ +E +  V+ VRPE+    G+  + KT++PL+  G G  P P PP V + G  G E 
Sbjct: 205 GAQHVEEAGHVERVRPEKDPTRGSGPHGKTQEPLE-RGRGPGPLPHPPRVADFGCGGGEG 264

Query: 145 TSEDDGGDYSHGETVNGRNQAEWDRAIAAEEDRRKTEEDGGEEVERDGADEE 197
             ED GGD  HGE + GR  A+ D A + EE+  + E  GG++V  DG DE+
Sbjct: 265 PEEDGGGDEGHGEAMEGREAADGDGAASDEEEEEEVEGGGGDDVGGDGGDEK 315

BLAST of Bhi04G000251 vs. ExPASy TrEMBL
Match: A0A5J5B354 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027337 PE=4 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-14
Identity = 51/96 (53.12%), Postives = 63/96 (65.62%), Query Frame = 0

Query: 89  MEVSREVKNVRPEEHAPGGASANWKTEQPLKWGGSGSAPSPEPPGVTNLGRSGEEDTSED 148
           ME +REV++V PEE APGG  A  + E+PL+W   G    PEP GV NLG  G ED  ED
Sbjct: 1   MEEAREVEDVGPEEDAPGGTRAEGEAEKPLEW---GFGAVPEPSGVANLGVGGGEDADED 60

Query: 149 DGGDYSHGETVNGRNQAEWDRAIAAEEDRRKTEEDG 185
            GGD SHGE V GR+ AEWD + +AEE+  + E +G
Sbjct: 61  GGGDESHGEAVEGRDGAEWDGSASAEEEEDEREREG 93

BLAST of Bhi04G000251 vs. ExPASy TrEMBL
Match: A0A1R3KSL1 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_04842 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 9.6e-14
Identity = 50/111 (45.05%), Postives = 74/111 (66.67%), Query Frame = 0

Query: 56  EPEEGSEDEDGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTE 115
           +P++  + + G++EEVE+ +++  ED +  +E +E +REVK+VRPEE A G A +  +TE
Sbjct: 11  QPKKRHDRQYGVVEEVEEGQSSTPEDDDDRSEHVEETREVKDVRPEEDAAGRAGSEGETE 70

Query: 116 QPLKWGGSGSAPSPEPPGVTNLGRSGEEDTSEDDGGDYSHGETVNGRNQAE 167
           +PL+W   G   +PEPPG  +    GEED+ EDDGGD  HGE V GR+  E
Sbjct: 71  EPLEW---GLGTAPEPPGFLDFSGGGEEDSGEDDGGDDGHGEAVEGRDWTE 118

BLAST of Bhi04G000251 vs. ExPASy TrEMBL
Match: A0A5J5BXF5 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_003830 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-12
Identity = 67/186 (36.02%), Postives = 92/186 (49.46%), Query Frame = 0

Query: 1   MIEQVTGKKSSLAIKYEREAGGREPDGGQESVTIDEGMEEGSGENGENLKRLCEFEPEEG 60
           M +Q+  ++ +LAI +ER+A  R+ + G ESV                            
Sbjct: 42  MAQQIATQQHNLAIHHERKASTRQSNCGPESVPF-------------------------- 101

Query: 61  SEDEDGMIEEVEQWEATAAEDGEKGAEEMEVSREVKNVRPEEHAPGGASANWKTEQPLKW 120
                            ++EDGE  AE +E S EV++V PEE  PGGA A  + E+PL+W
Sbjct: 102 ----------------PSSEDGEIRAECVEESGEVEDVGPEEDPPGGAGAEGEAEEPLEW 161

Query: 121 GGSGSAPSPEPPGVTNLGRSGEEDTSEDDGGDYSHGETVNGRNQAEWDRA--IAAEEDRR 180
              G    PEPPGV++LG  GEED  ED   D  HGE V GR++ E + A  +A EE  +
Sbjct: 162 ---GLRAPPEPPGVSDLGGRGEEDAGEDGDRDEGHGEAVEGRDRTERNGAAVVAEEEADK 182

Query: 181 KTEEDG 185
           + EEDG
Sbjct: 222 EVEEDG 182

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAF7817551.12.0e-2943.07hypothetical protein G2W53_031520 [Senna tora][more]
POO02602.11.8e-1942.63hypothetical protein TorRG33x02_015860 [Trema orientale][more]
RAL40495.14.5e-1841.28hypothetical protein DM860_006565 [Cuscuta australis][more]
KAA8537673.14.0e-1453.13hypothetical protein F0562_027337 [Nyssa sinensis][more]
OMP10082.12.0e-1345.05hypothetical protein COLO4_04842 [Corchorus olitorius][more]
Match NameE-valueIdentityDescription
A0A2P5FXT18.9e-2042.63Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_015860 PE=4 SV... [more]
A0A328D4582.2e-1841.28Uncharacterized protein OS=Cuscuta australis OX=267555 GN=DM860_006565 PE=4 SV=1[more]
A0A5J5B3541.9e-1453.13Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_027337 PE=4 SV=1[more]
A0A1R3KSL19.6e-1445.05Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_04842 PE=4 SV=1[more]
A0A5J5BXF51.1e-1236.02Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_003830 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..202
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..57

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000251Bhi04M000251mRNA