Bhi04G000237 (gene) Wax gourd (B227) v1

Overview
NameBhi04G000237
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionMyb/SANT-like domain containing protein
Locationchr4: 6335465 .. 6335947 (+)
RNA-Seq ExpressionBhi04G000237
SyntenyBhi04G000237
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGTAGTCTCATCTAGCGTGAAGGGTTTGAGACACGAACCATTCCCCCACTATGATGAGTTTTCAATCGTATTTGGAAAAGATAGGGCCACTGGTGAAGGCAATGAAATCCTGTATGATCAAGCATCTGCAACAGATAAACATTTGGAGGATATTCAGTTGAGATCACAGGTTAATGAGCAACAAGAAAGTATACCTGACATGAACATAACGACCGTTATTGGGATGGATGAGGTTTTCCCATATACACCCATCAATAGGCGTACTGGATCGAGTAACGATACAAGAGGAACGAAAAGCAAGAGGACTCCCTCCCAATCTGAAGTGCTTGACATTGTACGCACAACAATGGACGTGCAAGAAAGTAAAATGGAGAAACTTGTCCAATGGTAGAAAGAGAAATATGAATTAGAGCTCAAGAGGCGTCAGGAGGTCATTGAACAGATTTACCAAGTTGAGGGTTTAAAGGAGGACGATTAG

mRNA sequence

ATGTTTGTAGTCTCATCTAGCGTGAAGGGTTTGAGACACGAACCATTCCCCCACTATGATGAGTTTTCAATCGTATTTGGAAAAGATAGGGCCACTGGTGAAGGCAATGAAATCCTGTATGATCAAGCATCTGCAACAGATAAACATTTGGAGGATATTCAGTTGAGATCACAGGTTAATGAGCAACAAGAAAGTATACCTGACATGAACATAACGACCGTTATTGGGATGGATGAGGTTTTCCCATATACACCCATCAATAGGCGTACTGGATCGAGTAACGATACAAGAGGAACGAAAAGCAAGAGGACTCCCTCCCAATCTGAAGTGCTTGACATTGTACGCACAACAATGGACGTGCAAGAAAGTAAAATGGAGAAACTTCTCAAGAGGCGTCAGGAGGTCATTGAACAGATTTACCAAGTTGAGGGTTTAAAGGAGGACGATTAG

Coding sequence (CDS)

ATGTTTGTAGTCTCATCTAGCGTGAAGGGTTTGAGACACGAACCATTCCCCCACTATGATGAGTTTTCAATCGTATTTGGAAAAGATAGGGCCACTGGTGAAGGCAATGAAATCCTGTATGATCAAGCATCTGCAACAGATAAACATTTGGAGGATATTCAGTTGAGATCACAGGTTAATGAGCAACAAGAAAGTATACCTGACATGAACATAACGACCGTTATTGGGATGGATGAGGTTTTCCCATATACACCCATCAATAGGCGTACTGGATCGAGTAACGATACAAGAGGAACGAAAAGCAAGAGGACTCCCTCCCAATCTGAAGTGCTTGACATTGTACGCACAACAATGGACGTGCAAGAAAGTAAAATGGAGAAACTTCTCAAGAGGCGTCAGGAGGTCATTGAACAGATTTACCAAGTTGAGGGTTTAAAGGAGGACGATTAG

Protein sequence

MFVVSSSVKGLRHEPFPHYDEFSIVFGKDRATGEGNEILYDQASATDKHLEDIQLRSQVNEQQESIPDMNITTVIGMDEVFPYTPINRRTGSSNDTRGTKSKRTPSQSEVLDIVRTTMDVQESKMEKLLKRRQEVIEQIYQVEGLKEDD
Homology
BLAST of Bhi04G000237 vs. NCBI nr
Match: XP_038877524.1 (uncharacterized protein LOC120069782 [Benincasa hispida])

HSP 1 Score: 186.0 bits (471), Expect = 2.3e-43
Identity = 97/131 (74.05%), Postives = 112/131 (85.50%), Query Frame = 0

Query: 7   SVKGLRHEPFPHYDEFSIVFGKDRATGEGNEILYDQASATDKHLEDIQLRSQVNEQQESI 66
           + KGL+H+PF +YDE SIVFGKDRAT EG+E  YDQASATD+HLEDI+L SQVNEQQESI
Sbjct: 47  NAKGLKHKPFLYYDELSIVFGKDRATSEGSETPYDQASATDEHLEDIRLGSQVNEQQESI 106

Query: 67  PDMNITTVIGMDEVFPYTPINRRTGSSNDTRGTKSKRTPSQSEVLDIVRTTMDVQESKME 126
           PDMNITTV GM+EVFP TPI+R TGSSND RGTK KRTP QSE+LDIV   MD+QESKME
Sbjct: 107 PDMNITTVDGMNEVFPDTPISRYTGSSNDMRGTKRKRTPFQSEMLDIVCIAMDIQESKME 166

Query: 127 KLLKRRQEVIE 138
           KL++ ++E  E
Sbjct: 167 KLVQWQKEKYE 177

BLAST of Bhi04G000237 vs. NCBI nr
Match: XP_038887032.1 (uncharacterized protein LOC120077200 [Benincasa hispida])

HSP 1 Score: 106.3 bits (264), Expect = 2.3e-19
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 0

Query: 7  SVKGLRHEPFPHYDEFSIVFGKDRATGEGNEILYDQASATDKHLEDIQLRSQVNEQQESI 66
          + KGLRH+PFPHYDE SIVFGKDRA GEG++  YDQASATD+HLEDI L SQVNEQQ+SI
Sbjct: 34 NAKGLRHKPFPHYDELSIVFGKDRAIGEGSDTPYDQASATDEHLEDIWLGSQVNEQQKSI 93

Query: 67 PDM 70
          PDM
Sbjct: 94 PDM 96

BLAST of Bhi04G000237 vs. NCBI nr
Match: XP_038889264.1 (uncharacterized protein At2g29880-like [Benincasa hispida])

HSP 1 Score: 93.2 bits (230), Expect = 2.0e-15
Identity = 43/56 (76.79%), Postives = 51/56 (91.07%), Query Frame = 0

Query: 7   SVKGLRHEPFPHYDEFSIVFGKDRATGEGNEILYDQASATDKHLEDIQLRSQVNEQ 63
           +VKGLRH+PFPH DE SIVFGKDRAT EG++  +DQASATD+HLEDI+L+SQVNEQ
Sbjct: 115 NVKGLRHKPFPHCDELSIVFGKDRATSEGSKTPFDQASATDEHLEDIRLKSQVNEQ 170

BLAST of Bhi04G000237 vs. NCBI nr
Match: XP_038899910.1 (uncharacterized protein LOC120087100 [Benincasa hispida])

HSP 1 Score: 73.2 bits (178), Expect = 2.2e-09
Identity = 53/159 (33.33%), Postives = 86/159 (54.09%), Query Frame = 0

Query: 7   SVKGLRHEPFPHYDEFSIVFGKDRATGEGNEILYDQASATDKHLED-IQLRSQVNEQQES 66
           + KG+ ++ FPHYD+ S VFGKDRA G+ +E  Y  A    +  ED I+L SQ     E 
Sbjct: 29  NAKGMWNKSFPHYDDLSTVFGKDRAVGQSSEDPYVMAKNAFREFEDEIRLGSQDCRTAEV 88

Query: 67  IPDMNITTVIGMDEVFPYTPINRRTGSSN----DTRGTKSKRTPSQSEVLDIVRTTMDVQ 126
                  + +  DE+    P  + TG ++     ++G+K KR   Q+E++DI+R+T+++Q
Sbjct: 89  ---RQTESPLNQDEI-DEEPAEQSTGRASVPVETSQGSKRKRPSFQAEMIDIMRSTVEMQ 148

Query: 127 ESKMEKL-----------LKRRQEVIEQIYQVEGLKEDD 150
            + M +L            +  +EV+  IY ++GL EDD
Sbjct: 149 STHMGRLASWQKEKYELEFEHWKEVVNAIYSIDGLDEDD 183

BLAST of Bhi04G000237 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia])

HSP 1 Score: 72.0 bits (175), Expect = 4.8e-09
Identity = 60/163 (36.81%), Postives = 87/163 (53.37%), Query Frame = 0

Query: 7   SVKGLRHEPFPHYDEFSIVFGKDRATGEGNEILYDQAS------ATDKHLEDIQLRSQVN 66
           + KGLR++P PHYD+ ++ FGKDRATG   +   D AS      A D H E         
Sbjct: 30  NAKGLRNKP-PHYDDLTVAFGKDRATGANLDCPVDMASSAAATIAEDAHFE--------- 89

Query: 67  EQQESIPD--MNITTVIGMDEVFPYTPINRRT-GSSNDTRGTKSKRTPSQSEVLDIVRTT 126
            Q   IPD  M  TT   ++E  P TP ++ T G+S+   G+K KR+   SE++D+VRT 
Sbjct: 90  AQDFYIPDPPMFNTTEDAIEEDLPNTPTSKPTIGTSSG--GSKRKRSGYTSEMVDVVRTN 149

Query: 127 MDVQ-----------ESKMEKLLKRRQEVIEQIYQVEGLKEDD 150
           M +Q           + K EK + RR+ V +Q+ Q+  L+ +D
Sbjct: 150 MRMQTAHLEKMATWPDKKEEKKIARRKIVHDQLKQIPNLEAND 180

BLAST of Bhi04G000237 vs. ExPASy TrEMBL
Match: A0A6J1DW73 (uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025018 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 2.3e-09
Identity = 60/163 (36.81%), Postives = 87/163 (53.37%), Query Frame = 0

Query: 7   SVKGLRHEPFPHYDEFSIVFGKDRATGEGNEILYDQAS------ATDKHLEDIQLRSQVN 66
           + KGLR++P PHYD+ ++ FGKDRATG   +   D AS      A D H E         
Sbjct: 30  NAKGLRNKP-PHYDDLTVAFGKDRATGANLDCPVDMASSAAATIAEDAHFE--------- 89

Query: 67  EQQESIPD--MNITTVIGMDEVFPYTPINRRT-GSSNDTRGTKSKRTPSQSEVLDIVRTT 126
            Q   IPD  M  TT   ++E  P TP ++ T G+S+   G+K KR+   SE++D+VRT 
Sbjct: 90  AQDFYIPDPPMFNTTEDAIEEDLPNTPTSKPTIGTSSG--GSKRKRSGYTSEMVDVVRTN 149

Query: 127 MDVQ-----------ESKMEKLLKRRQEVIEQIYQVEGLKEDD 150
           M +Q           + K EK + RR+ V +Q+ Q+  L+ +D
Sbjct: 150 MRMQTAHLEKMATWPDKKEEKKIARRKIVHDQLKQIPNLEAND 180

BLAST of Bhi04G000237 vs. ExPASy TrEMBL
Match: A0A6P5U2X6 (uncharacterized protein At2g29880-like OS=Prunus avium OX=42229 GN=LOC110773273 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 7.1e-06
Identity = 43/157 (27.39%), Postives = 82/157 (52.23%), Query Frame = 0

Query: 4   VSSSVKGLRHEPFPHYDEFSIVFGKDRATGEGNEILYDQASATDKHLEDIQLRSQVNEQQ 63
           V +S KGLR++PFPHYD    VFGKDRA G+G       A    + +ED+   S  N + 
Sbjct: 122 VHNSAKGLRNKPFPHYDTLVEVFGKDRANGKG-------AEGPAEVIEDLTDNSTFNFEG 181

Query: 64  ESIPDMNITTVIGMDEVF-PYTPINRRTGSSNDTRGTKSKRTPSQSEVLDIVRTTMDVQE 123
           + + D+N ++      +  P T  N+R  + N ++        S +++   +R+ +DV +
Sbjct: 182 DGLDDINFSSPTTQTPICPPSTRPNKRARNDNWSQ--------SMADMASTLRSFVDVTK 241

Query: 124 SKMEKL----------LKRRQEVIEQIYQVEGLKEDD 150
           + +E +           +RR ++++++ +++GL + D
Sbjct: 242 THLETVKCVLMSENATSERRGKIVDELQKIQGLSDMD 263

BLAST of Bhi04G000237 vs. ExPASy TrEMBL
Match: M5VKI8 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016911mg PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 6.6e-04
Identity = 40/150 (26.67%), Postives = 75/150 (50.00%), Query Frame = 0

Query: 4   VSSSVKGLRHEPFPHYDEFSIVFGKDRATGEGNEILYDQASATDKHLEDIQLRSQVNEQQ 63
           V +S K LR++ FPHYD    VFGKDRA G+G       A    + +ED+   +  N + 
Sbjct: 43  VHNSAKRLRNKQFPHYDTLVEVFGKDRANGKG-------AEGPAEVIEDLTDNNTFNFEG 102

Query: 64  ESIPDMNITTVIGMDEVFPYTPINRRTGSSNDTRGTKSKRTPSQS----EVLDIVRTTMD 123
           + + D+N ++      + P             TR  K  R  S S    ++   +R+ +D
Sbjct: 103 DGLDDINFSSPTTQTPICP-----------PSTRPNKRARNDSWSHTIGDMASTLRSFVD 162

Query: 124 VQESKMEKLLKRRQEVIEQIYQVEGLKEDD 150
           + ++ +E  +K R ++++++ +++GL + D
Sbjct: 163 MTKTHLE-TMKSRAKIVDELQKIQGLSDMD 173

BLAST of Bhi04G000237 vs. ExPASy TrEMBL
Match: A0A2P5D960 (Myb/SANT-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_085920 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 8.6e-04
Identity = 45/150 (30.00%), Postives = 73/150 (48.67%), Query Frame = 0

Query: 7   SVKGLRHEPFPHYDEFSIVFGKDRATGEG------------NEILYDQASATDKHLEDIQ 66
           + KGLR+  FP+YDE  +VFGKDRATG+G             EI  DQ   TDK + + Q
Sbjct: 122 TAKGLRYRSFPYYDELGVVFGKDRATGQGAMGFSDMVEESAKEIRNDQ--GTDKKIRNDQ 181

Query: 67  LRSQVNEQQESIPDMNITTVIGMDEVFPYTPINR-RTGSSNDTRGTKSKRTPSQSEVLDI 126
               ++++  +  D ++  +   D++     ++   T S+    G KSKR+ S+  ++D+
Sbjct: 182 ---DIDKETRNDQDNDVDPLNHFDDLDGAASVSHASTQSALSQSGKKSKRSRSEDALIDV 241

Query: 127 VRTTMDVQESKMEKLLKRRQEVIEQIYQVE 144
           +  T+  Q  KM          I   +Q E
Sbjct: 242 LTKTVK-QFGKMHAASGETINKIANCFQYE 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038877524.12.3e-4374.05uncharacterized protein LOC120069782 [Benincasa hispida][more]
XP_038887032.12.3e-1979.37uncharacterized protein LOC120077200 [Benincasa hispida][more]
XP_038889264.12.0e-1576.79uncharacterized protein At2g29880-like [Benincasa hispida][more]
XP_038899910.12.2e-0933.33uncharacterized protein LOC120087100 [Benincasa hispida][more]
XP_022158565.14.8e-0936.81uncharacterized protein LOC111025018 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1DW732.3e-0936.81uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6P5U2X67.1e-0627.39uncharacterized protein At2g29880-like OS=Prunus avium OX=42229 GN=LOC110773273 ... [more]
M5VKI86.6e-0426.67Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa016911m... [more]
A0A2P5D9608.6e-0430.00Myb/SANT-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanW... [more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 118..138
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..107
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..107
NoneNo IPR availablePANTHERPTHR46250MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATEDcoord: 8..148

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000237Bhi04M000237mRNA