Bhi04G000221 (gene) Wax gourd (B227) v1

Overview
NameBhi04G000221
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionB3 domain-containing protein At2g31420-like
Locationchr4: 6011407 .. 6011619 (+)
RNA-Seq ExpressionBhi04G000221
SyntenyBhi04G000221
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAGGCAAAAAGAAATAGTGTTTTCGAAGACGATTGAGATGTCGACGGCGTTGCAAGAGCGAATTGCTGAATTGGGTGGCTTCGACATCCAAATGTTGACTCAAAAGAAATTGCAAGACACTGATATGAATAAGAACCATGGTCGATTATTGATTCCATTCGGAAAACTCATGAATGACTTTGCTACAGAAATGAGAAAAAGATGTTAA

mRNA sequence

ATGAAGAGGCAAAAAGAAATAGTGTTTTCGAAGACGATTGAGATGTCGACGGCGTTGCAAGAGCGAATTGCTGAATTGGGTGGCTTCGACATCCAAATGTTGACTCAAAAGAAATTGCAAGACACTGATATGAATAAGAACCATGGTCGATTATTGATTCCATTCGGAAAACTCATGAATGACTTTGCTACAGAAATGAGAAAAAGATGTTAA

Coding sequence (CDS)

ATGAAGAGGCAAAAAGAAATAGTGTTTTCGAAGACGATTGAGATGTCGACGGCGTTGCAAGAGCGAATTGCTGAATTGGGTGGCTTCGACATCCAAATGTTGACTCAAAAGAAATTGCAAGACACTGATATGAATAAGAACCATGGTCGATTATTGATTCCATTCGGAAAACTCATGAATGACTTTGCTACAGAAATGAGAAAAAGATGTTAA

Protein sequence

MKRQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDFATEMRKRC
Homology
[Close]
BLAST of Bhi04G000221 vs. NCBI nr
Match: XP_004152777.2 (putative B3 domain-containing protein At2g27410 [Cucumis sativus] >KAE8652107.1 hypothetical protein Csa_022429 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 1.6e-18
Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 2   KRQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMND 61
           +R+K++VFSKTIEM   L++RI ELGGF+IQ  TQK+LQDTDMNKNHGRLLIPF KL+ND
Sbjct: 85  ERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQKRLQDTDMNKNHGRLLIPFKKLVND 144

Query: 62  FATEMRKR 70
           FA+E  KR
Sbjct: 145 FASEEEKR 152

[Close]
BLAST of Bhi04G000221 vs. NCBI nr
Match: XP_008445565.1 (PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo] >KAA0065235.1 B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 100.9 bits (250), Expect = 4.6e-18
Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 2   KRQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMND 61
           +R+K++VFSKTIEMS  L++RI EL GFDIQ +TQK+LQDTDMNKNHGRLLIPF KL ND
Sbjct: 80  ERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDTDMNKNHGRLLIPFKKLRND 139

Query: 62  FATEMRKR 70
           FA+E  K+
Sbjct: 140 FASEEEKQ 147

[Close]
BLAST of Bhi04G000221 vs. NCBI nr
Match: XP_022144152.1 (B3 domain-containing protein At2g31420-like [Momordica charantia])

HSP 1 Score: 93.2 bits (230), Expect = 9.5e-16
Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 0 

Query: 3   RQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDF 62
           +Q E+VFS TIEM   L++RIAELGG+DIQ++ QK+LQDTD+N+NHGRL IP  KL+NDF
Sbjct: 40  KQLEVVFSSTIEMPAXLRDRIAELGGYDIQIVIQKRLQDTDLNRNHGRLSIPIKKLLNDF 99

Query: 63  ATEMRKR 70
            TE  K+
Sbjct: 100 TTEEEKQ 106

[Close]
BLAST of Bhi04G000221 vs. NCBI nr
Match: XP_022144153.1 (uncharacterized protein LOC111013910 [Momordica charantia])

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15
Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 0 

Query: 3   RQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDF 62
           +  E+VFS TIEM   L++RIAELGG+DIQ + QK+LQDTD+N+NHGRL IP  KL+NDF
Sbjct: 37  KXSEVVFSSTIEMPALLRDRIAELGGYDIQXVIQKRLQDTDLNRNHGRLSIPIKKLLNDF 96

Query: 63  ATEMRKR 70
           ATE  K+
Sbjct: 97  ATEEEKK 103

[Close]
BLAST of Bhi04G000221 vs. NCBI nr
Match: KAG6598443.1 (B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 92.4 bits (228), Expect = 1.6e-15
Identity = 43/64 (67.19%), Postives = 55/64 (85.94%), Query Frame = 0 

Query: 2  KRQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMND 61
          KR++E+VFS T+EM  AL+ERI  +GG D+Q++TQK+LQ++D NKNHGRLLIP  KLMND
Sbjct: 36 KRRREMVFSSTVEMPAALRERIEAMGGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMND 95

Query: 62 FATE 66
          FATE
Sbjct: 96 FATE 99

[Close]
BLAST of Bhi04G000221 vs. ExPASy TrEMBL
Match: A0A0A0LL20 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361650 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.6e-19
Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 2   KRQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMND 61
           +R+K++VFSKTIEM   L++RI ELGGF+IQ  TQK+LQDTDMNKNHGRLLIPF KL+ND
Sbjct: 85  ERRKDVVFSKTIEMPQMLRDRIEELGGFNIQFATQKRLQDTDMNKNHGRLLIPFKKLVND 144

Query: 62  FATEMRKR 70
           FA+E  KR
Sbjct: 145 FASEEEKR 152

[Close]
BLAST of Bhi04G000221 vs. ExPASy TrEMBL
Match: A0A5A7VHB3 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005760 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18
Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 2   KRQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMND 61
           +R+K++VFSKTIEMS  L++RI EL GFDIQ +TQK+LQDTDMNKNHGRLLIPF KL ND
Sbjct: 80  ERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDTDMNKNHGRLLIPFKKLRND 139

Query: 62  FATEMRKR 70
           FA+E  K+
Sbjct: 140 FASEEEKQ 147

[Close]
BLAST of Bhi04G000221 vs. ExPASy TrEMBL
Match: A0A1S3BCJ5 (B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488545 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.2e-18
Identity = 49/68 (72.06%), Postives = 59/68 (86.76%), Query Frame = 0 

Query: 2   KRQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMND 61
           +R+K++VFSKTIEMS  L++RI EL GFDIQ +TQK+LQDTDMNKNHGRLLIPF KL ND
Sbjct: 80  ERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDTDMNKNHGRLLIPFKKLRND 139

Query: 62  FATEMRKR 70
           FA+E  K+
Sbjct: 140 FASEEEKQ 147

[Close]
BLAST of Bhi04G000221 vs. ExPASy TrEMBL
Match: A0A6J1CSV9 (B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LOC111013909 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.6e-16
Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 0 

Query: 3   RQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDF 62
           +Q E+VFS TIEM   L++RIAELGG+DIQ++ QK+LQDTD+N+NHGRL IP  KL+NDF
Sbjct: 40  KQLEVVFSSTIEMPAXLRDRIAELGGYDIQIVIQKRLQDTDLNRNHGRLSIPIKKLLNDF 99

Query: 63  ATEMRKR 70
            TE  K+
Sbjct: 100 TTEEEKQ 106

[Close]
BLAST of Bhi04G000221 vs. ExPASy TrEMBL
Match: A0A6J1CSJ5 (uncharacterized protein LOC111013910 OS=Momordica charantia OX=3673 GN=LOC111013910 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.0e-16
Identity = 43/67 (64.18%), Postives = 54/67 (80.60%), Query Frame = 0 

Query: 3   RQKEIVFSKTIEMSTALQERIAELGGFDIQMLTQKKLQDTDMNKNHGRLLIPFGKLMNDF 62
           +  E+VFS TIEM   L++RIAELGG+DIQ + QK+LQDTD+N+NHGRL IP  KL+NDF
Sbjct: 37  KXSEVVFSSTIEMPALLRDRIAELGGYDIQXVIQKRLQDTDLNRNHGRLSIPIKKLLNDF 96

Query: 63  ATEMRKR 70
           ATE  K+
Sbjct: 97  ATEEEKK 103

The following BLAST results are available for this feature:
BLAST of Bhi04G000221 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G000221 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi04G000221 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152777.21.6e-1872.06putative B3 domain-containing protein At2g27410 [Cucumis sativus] >KAE8652107.1 ... [more]
XP_008445565.14.6e-1872.06PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo] >KAA006523... [more]
XP_022144152.19.5e-1664.18B3 domain-containing protein At2g31420-like [Momordica charantia][more]
XP_022144153.11.2e-1564.18uncharacterized protein LOC111013910 [Momordica charantia][more]
KAG6598443.11.6e-1567.19B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia][more]
BLAST of Bhi04G000221 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LL207.6e-1972.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361650 PE=4 SV=1[more]
A0A5A7VHB32.2e-1872.06B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca... [more]
A0A1S3BCJ52.2e-1872.06B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488... [more]
A0A6J1CSV94.6e-1664.18B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LO... [more]
A0A6J1CSJ56.0e-1664.18uncharacterized protein LOC111013910 OS=Momordica charantia OX=3673 GN=LOC111013... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000221Bhi04M000221mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding