Bhi04G000210 (gene) Wax gourd (B227) v1

Overview
NameBhi04G000210
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC110412945
Locationchr4: 5597360 .. 5597757 (+)
RNA-Seq ExpressionBhi04G000210
SyntenyBhi04G000210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCCATTCAAAATCTTGAACTTCAAATGAGGCAGAGTGCCAGAGAATTGAAAAACAGACCACAAGGTTCACTACCAAGCAACATTGAAGTTCCTCACAATGCAGGAAGTTCAGGCAAAGAACAAAGTCACACAATGACATTAAGAAGTGGTTGCATAATGAAGGAATATCATAAGGAAAGTCAATCAAGCTTACTAATGAAGTGCTGAGACATTCTTTTGATGAACAGATTGACAAGCAACCAATGCAGGAAACACAGATACCATCATATGAAAATCAAGTGGAACGCAAAGACTCATCTGCGATAGCTTCTACTTCGAAGGCGTCAAATGAGGTGCAACTCCCTCCATACTCACAAAGATTGAGGAGGAAGGATGATGAAAACCAATTTTAA

mRNA sequence

ATGACATCCATTCAAAATCTTGAACTTCAAATGAGGCAGAGTGCCAGAGAATTGAAAAACAGACCACAAGGTTCACTACCAAGCAACATTGAAGTTCCTCACAATGCAGGAAGTTCAGGCAAAGAACAAAGTCACACAATGACATTAAGAAGTGGTTGCATAATGAAGGAATATCATAAGGAAATGCTGAGACATTCTTTTGATGAACAGATTGACAAGCAACCAATGCAGGAAACACAGATACCATCATATGAAAATCAAGTGGAACGCAAAGACTCATCTGCGATAGCTTCTACTTCGAAGGCGTCAAATGAGGTGCAACTCCCTCCATACTCACAAAGATTGAGGAGGAAGGATGATGAAAACCAATTTTAA

Coding sequence (CDS)

ATGACATCCATTCAAAATCTTGAACTTCAAATGAGGCAGAGTGCCAGAGAATTGAAAAACAGACCACAAGGTTCACTACCAAGCAACATTGAAGTTCCTCACAATGCAGGAAGTTCAGGCAAAGAACAAAGTCACACAATGACATTAAGAAGTGGTTGCATAATGAAGGAATATCATAAGGAAATGCTGAGACATTCTTTTGATGAACAGATTGACAAGCAACCAATGCAGGAAACACAGATACCATCATATGAAAATCAAGTGGAACGCAAAGACTCATCTGCGATAGCTTCTACTTCGAAGGCGTCAAATGAGGTGCAACTCCCTCCATACTCACAAAGATTGAGGAGGAAGGATGATGAAAACCAATTTTAA

Protein sequence

MTSIQNLELQMRQSARELKNRPQGSLPSNIEVPHNAGSSGKEQSHTMTLRSGCIMKEYHKEMLRHSFDEQIDKQPMQETQIPSYENQVERKDSSAIASTSKASNEVQLPPYSQRLRRKDDENQF
Homology
BLAST of Bhi04G000210 vs. NCBI nr
Match: XP_038896360.1 (uncharacterized protein LOC120084623 [Benincasa hispida])

HSP 1 Score: 72.4 bits (176), Expect = 3.1e-09
Identity = 50/117 (42.74%), Postives = 71/117 (60.68%), Query Frame = 0

Query: 11  MRQSARELKNRPQGSLPSNIEVPHNAGSSGKEQSHTMTLRSGCIMKEYHKEMLRHSFDEQ 70
           M Q ARELKNRPQG+LPS+ E+P N G++GKE    +TLRSG    +  KE  +    EQ
Sbjct: 1   MGQIARELKNRPQGTLPSSTELPRNPGNTGKEHCQAVTLRSGKATTKVRKEPHKTESKEQ 60

Query: 71  -IDKQPMQETQIPSYENQV-ERKDSSAIASTSKASNEVQLPPYSQRLRRK-DDENQF 125
            + +     +QI S E++  E KD+         + +VQLPP+ QRL++K +DE Q+
Sbjct: 61  PVIESKKALSQIESKESKTRETKDAITSKPPDHETLKVQLPPFPQRLKKKHNDERQY 117

BLAST of Bhi04G000210 vs. NCBI nr
Match: XP_038891723.1 (uncharacterized protein LOC120081122 [Benincasa hispida])

HSP 1 Score: 65.9 bits (159), Expect = 2.9e-07
Identity = 45/118 (38.14%), Postives = 68/118 (57.63%), Query Frame = 0

Query: 11  MRQSARELKNRPQGSLPSNIEVPHNAGSSGKEQSHTMTLRSGCIMKEYHKEMLRHSFDEQ 70
           M Q+  ELKNRPQG+L S+ E+P N G++GKE   T+ LRSG    +  +E  +    EQ
Sbjct: 1   MGQTIEELKNRPQGTLASSTELPCNLGNAGKEHCQTVALRSGKAAIKAREEPCKTESKEQ 60

Query: 71  I---DKQPMQETQIPSYENQVERKDSSAIASTSKASNEVQLPPYSQRLRRK-DDENQF 125
                KQP+ +T+    +   E +D+      +  + EVQLP + QRL++K +DE Q+
Sbjct: 61  STIESKQPLSQTESMKSKTTRELEDAITSKPPNHETLEVQLPSFPQRLKKKHNDEGQY 118

BLAST of Bhi04G000210 vs. NCBI nr
Match: XP_038889306.1 (uncharacterized protein LOC120079216 [Benincasa hispida])

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06
Identity = 49/118 (41.53%), Postives = 73/118 (61.86%), Query Frame = 0

Query: 12  RQSARELKNRPQGSLPSNIEVPHNAGSSGKEQSHTMTLRSGCIMKEYHKEMLRHSFDEQI 71
           R  A ELK+RPQG+L S  ++P N+G++ KEQ   +TLRSG  + E  KE  R +     
Sbjct: 19  RHIAGELKSRPQGALLSLTKLPRNSGNTRKEQCQVVTLRSGKTVAEEKKEPRRTTLVAME 78

Query: 72  DKQPMQETQIPSYENQVERKDSSAIASTSK----ASNEVQLPPYSQRL-RRKDDENQF 125
            + P+  TQ    EN++ + +   +ASTSK     + +VQLPP+SQRL ++K+DE Q+
Sbjct: 79  LQTPL--TQEEPKENEMMKPE---VASTSKPMVQGTMKVQLPPFSQRLEKKKNDEVQY 131

BLAST of Bhi04G000210 vs. NCBI nr
Match: XP_038877873.1 (uncharacterized protein LOC120070093 [Benincasa hispida])

HSP 1 Score: 63.5 bits (153), Expect = 1.4e-06
Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = 0

Query: 17  ELKNRPQGSLPSNIEVPHNAGSSGKEQSHTMTLRSGCIMKEYHKEMLRHSFDEQ---IDK 76
           ELKNRPQG LPS+IE+P N G +GKE    +TLRSG +M E  K+  + +  E+     K
Sbjct: 3   ELKNRPQGRLPSSIELPRNPGITGKEHCQAVTLRSGKVMAEVRKDSSKTNSKEKPTIESK 62

Query: 77  QPMQETQIPSYENQVERKDSSAIASTSKASNEVQLPPYSQRLRR 118
           +P+ +T+       +E +D+         + +VQLP + QRL+R
Sbjct: 63  KPLSQTE-SKEPKTMELEDAITSKPPDHGTMKVQLPLFPQRLKR 105

BLAST of Bhi04G000210 vs. NCBI nr
Match: XP_038889254.1 (uncharacterized protein LOC120079150 [Benincasa hispida])

HSP 1 Score: 63.2 bits (152), Expect = 1.9e-06
Identity = 52/129 (40.31%), Postives = 72/129 (55.81%), Query Frame = 0

Query: 2   TSIQNLELQMRQSARELKNRPQGSLPSNIEVPHNAGSSGKEQSHTMTLRSGCIMKEYHKE 61
           +SI+NLE+Q+ Q A ELKNRP   LPSN E P N  S+ KEQ H +TLRSG       K 
Sbjct: 140 SSIRNLEIQVGQIASELKNRPPKVLPSNTETPGN--SNRKEQCHAVTLRSG-------KS 199

Query: 62  MLRHSFDEQIDKQPMQETQIP-SYENQVERKDSSAIASTSKASN----EVQL-PPYSQRL 121
           +++ + + + +    + T  P ++E+Q ER   S        SN     VQL  P+  RL
Sbjct: 200 LVKRTVNPRNNNPSTKHTTRPKAFEDQEERTSDSTSHPNPSTSNAGALAVQLKAPFPIRL 259

Query: 122 RRKDDENQF 125
            +K+DE QF
Sbjct: 260 LKKNDEQQF 259

BLAST of Bhi04G000210 vs. ExPASy TrEMBL
Match: A0A6J0ZX64 (LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica OX=108875 GN=LOC110412945 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.9e-05
Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 0

Query: 3   SIQNLELQMRQSARELKNRPQGSLPSNIEVPHNAGSSGKEQSHTMTLRSGCIMKEYHKEM 62
           S++NLE Q+ Q A  + NRPQGSLPS+ ++       GKEQ   +TLRSG  ++  +++ 
Sbjct: 415 SLRNLETQVGQLANSINNRPQGSLPSDTQI----NPKGKEQCQAITLRSGKEIEGVNQKA 474

Query: 63  LRHSFDEQIDKQPMQETQIPSYENQVERKDSSAIASTSKASNEVQLPPYSQRLRRKDDEN 122
           +     E +DK+ M E +I     ++++KD     +   +      PP+ QRL+++  E 
Sbjct: 475 VESEI-EHVDKEGMCENEI-----EIQQKDDDKAENQGTSQVIHPPPPFPQRLQKQKLEK 526

Query: 123 QF 125
           QF
Sbjct: 535 QF 526

BLAST of Bhi04G000210 vs. ExPASy TrEMBL
Match: A0A6J1BDW4 (uncharacterized protein LOC110426584 OS=Herrania umbratica OX=108875 GN=LOC110426584 PE=4 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 2.9e-05
Identity = 41/122 (33.61%), Postives = 68/122 (55.74%), Query Frame = 0

Query: 3   SIQNLELQMRQSARELKNRPQGSLPSNIEVPHNAGSSGKEQSHTMTLRSGCIMKEYHKEM 62
           S++NLE Q+ Q A  + NRPQGSLPS+ ++       GKEQ   +TLRSG  ++  +++ 
Sbjct: 158 SLRNLETQVGQLANSINNRPQGSLPSDTQI----NPKGKEQCQAITLRSGKEIEGVNQKA 217

Query: 63  LRHSFDEQIDKQPMQETQIPSYENQVERKDSSAIASTSKASNEVQLPPYSQRLRRKDDEN 122
           +     E +DK+ M E +I     ++++KD     +   +      PP+ QRL+++  E 
Sbjct: 218 VESEI-EHVDKEGMCENEI-----EIQQKDDDKAENKGTSQVIHPPPPFPQRLQKQKLEK 269

Query: 123 QF 125
           QF
Sbjct: 278 QF 269

BLAST of Bhi04G000210 vs. ExPASy TrEMBL
Match: A0A0A0KMN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G055570 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 5.5e-04
Identity = 26/47 (55.32%), Postives = 35/47 (74.47%), Query Frame = 0

Query: 3   SIQNLELQMRQSARELKNRPQGSLPSNIEVPHNAGSSGKEQSHTMTL 50
           SI+NLELQM Q A ++  +P+G+LPSN E+P   GSSGKE+   +TL
Sbjct: 91  SIKNLELQMGQIANDISRQPKGTLPSNTEIPIQGGSSGKEKCQAVTL 137

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_038896360.13.1e-0942.74uncharacterized protein LOC120084623 [Benincasa hispida][more]
XP_038891723.12.9e-0738.14uncharacterized protein LOC120081122 [Benincasa hispida][more]
XP_038889306.11.4e-0641.53uncharacterized protein LOC120079216 [Benincasa hispida][more]
XP_038877873.11.4e-0639.42uncharacterized protein LOC120070093 [Benincasa hispida][more]
XP_038889254.11.9e-0640.31uncharacterized protein LOC120079150 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A6J0ZX642.9e-0533.61LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica ... [more]
A0A6J1BDW42.9e-0533.61uncharacterized protein LOC110426584 OS=Herrania umbratica OX=108875 GN=LOC11042... [more]
A0A0A0KMN35.5e-0455.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G055570 PE=4 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi04M000210Bhi04M000210mRNA