Bhi03G002093 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G002093
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	F-box protein SKIP24 isoform X2
Location	chr3: 61634636 .. 61636979 (+)
RNA-Seq Expression	Bhi03G002093
Synteny	Bhi03G002093

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGAATTGCCAGTTGAGCTATGGACACAAATTCTCGAAGTTGGTGTAAAGAGCTATGTTTTGACTTACAAAGATCTCTGTTGCGTCTCCATCTCTTCTCCTCGACTTCGCCGCCTCTCCGACGATGACTGTCTGTGGTCTCATCTTCTCTCTTCCGATTACCCTTCATCGTCTTCTTCTTTTCCGTCCTCCGCCTCCTCTTCAAAGTCCCTTTACAAAATCAGGTACAAGGAAGAATTCATGAGCTGCACGATATCTCTGAATTTCTCTCTTCTAATGGCGTCTGTTTAATCTGATTACGCTGGAACAAATTGGAGAGTCCGTGTTTCTTTTCTCTTCATGACGATTATTATTATTATTTTTTTCTGGTTAGGTTGGAGAGAGATAGAAATAGGAAGAAAGCGGCGCATATGAGAGCGGTGCTTAGAAAGGAAAGCCAAATAGCTGAGCACTATAGAAGGCTTGGTGAATTAGAGAATTGGTTGATGGTGGAGACCAACAAATTGACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGGTAGTGTTCGGCAATTAATTCAATATTTCAGTAATATTTCCTGTTCTTTTCCTCGTTTGATGTTTCAGTAATATTTTCTGTTTGCTTGTGCAACTTGGTTGCTTGCAATTAGTAAAATCGTTGATTGGAATTGTGCTTTCGTTGAGTATTATAGGCAGTGGGTAAAAGGAGGAAACCATAATAACTGATTGTTGTCATTGTATCTAAATTCAATTGGACCATCTTACTAGATTTTTGAGTTCAACAACATGTGGGGGCGAGGATTTCGAATCCTTAACCTCTTGGGTGGATGGTATATTGCCTACATAAGTTCGAACTATGCTTAGGTCAGCATAGGTCACCAAGACAATGAAAAATTGGCTTGGTACTTCGATTATCTGTTGATAACAAAGCCGAGTGGATTCGTTTGTCTAATGTGTGTCCAGTCTTGGTAACTTTTTGAACCTTTTTACCCCTTCACGTGTAATGCTAAAATGTTTAGTCCGGTTAGGAGTCAAATTTTTTAGATATGATAATTGTGTTTTGTCATCTCAGGGAAGCAACAGTAGCTTTGAACGTCTGGCAGCCTGAGGTCATTAGGGCAAGGCAAACACAAATTGTTGAACAATGTAGTGTATCTGTTGATTCTCGGTCTCGGACTCTAGATATGGAGCTCAAGATTTGTAAGCAACAAATTGCTATTTTTTGGAAAGCACTTGTAAGTCTTAAATGTGGAAACATTATTTTTCCATCTGATAAGAACTGTAATTTTAATTTCTAATACTGCTTGCCGCAGAAAGATGAAAGACAAAGACTCAACTTAGCTAAAGAAGAGTTAACTTCATTGAAGTACCACCCTCTAAAGGATCATAAATTTATAGATAGCAGTAATAATGTATCTCACATCAAGAGGAGGTCAAAGGATGCAATAAATGTAAGGTCCTTGCTTGTTGATTATGCTTCAAAATTTTCTGATTGTCAGTTTAAATATTTTTTTTCATCCTCATGATGATTTCGTTACCAAGAAATCTAACTGCTTCCACATGTATTCATAAATTTTAACGTGTGCACTATGTTCTATTAACAATTTTCTTCTTCAAACCATTGTTATTGTTTTCACATGATGTTAGAACTTCTCCCATTTTTACTAGATAAACTCATTAGGATACTTCATACTTCTTTTGACGAAAGTTCCCTAGTGTGATCGTGGGATGCTCGCTGTTCGTTGGTAGATTATCTGATGTATGGAACTTGATGTTCTTTTGAACTTTGAGTCTTTGACCTCCATAAGTAGCATGTATATGGAGGGTGGGGGTGGGTTTGAGGGGAGGGGAGCCTTTCTTCTTGTGATTGATTTATAATTTGGTTGGATTGATCTATATTTTATATACTTAATTATAAAGATTATATAGTCCGCTTTTTGTTTTCATAAATAAATTGGAAGACAAAATTAGGTTACTTTTGTATGAGTTCACTGTGAAAATTGTGCCTTACCTCTGTTTTCATTCGATACCTGAGATGATCTAATTTTGACACATTAACTGGCTTGTTCTCTTGTGGTTATTTTATATTCGTAGTTGAAATTTCTTCTTTGTAGCTCTTCATGACTACAGTATTGTTTATGCCTCAATTTTCACGTGCTCTACTTAGATAATCTTTTCTTCTTTCTTGCCTATATTGGTACCTGTTCCTTATATGTAAGGTAAACATTGCATCTTTGCTTAAAATTTGATTGTGAACTGGCACTGATATGGTAATATATGCTTGATTACCAATTTTTATCAGAGCAAGGTAAAACAGTTACGCAGTACATGA

mRNA sequence

ATGTCTGAATTGCCAGTTGAGCTATGGACACAAATTCTCGAAGTTGGTGTAAAGAGCTATGTTTTGACTTACAAAGATCTCTGTTGCGTCTCCATCTCTTCTCCTCGACTTCGCCGCCTCTCCGACGATGACTGTCTGTGGTCTCATCTTCTCTCTTCCGATTACCCTTCATCGTCTTCTTCTTTTCCGTCCTCCGCCTCCTCTTCAAAGTCCCTTTACAAAATCAGGTTGGAGAGAGATAGAAATAGGAAGAAAGCGGCGCATATGAGAGCGGTGCTTAGAAAGGAAAGCCAAATAGCTGAGCACTATAGAAGGCTTGGTGAATTAGAGAATTGGTTGATGGTGGAGACCAACAAATTGACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGGGAAGCAACAGTAGCTTTGAACGTCTGGCAGCCTGAGGTCATTAGGGCAAGGCAAACACAAATTGTTGAACAATGTAGTGTATCTGTTGATTCTCGGTCTCGGACTCTAGATATGGAGCTCAAGATTTGTAAGCAACAAATTGCTATTTTTTGGAAAGCACTTAAAGATGAAAGACAAAGACTCAACTTAGCTAAAGAAGAGTTAACTTCATTGAAGTACCACCCTCTAAAGGATCATAAATTTATAGATAGCAGTAATAATGTATCTCACATCAAGAGGAGGTCAAAGGATGCAATAAATAGCAAGGTAAAACAGTTACGCAGTACATGA

Coding sequence (CDS)

ATGTCTGAATTGCCAGTTGAGCTATGGACACAAATTCTCGAAGTTGGTGTAAAGAGCTATGTTTTGACTTACAAAGATCTCTGTTGCGTCTCCATCTCTTCTCCTCGACTTCGCCGCCTCTCCGACGATGACTGTCTGTGGTCTCATCTTCTCTCTTCCGATTACCCTTCATCGTCTTCTTCTTTTCCGTCCTCCGCCTCCTCTTCAAAGTCCCTTTACAAAATCAGGTTGGAGAGAGATAGAAATAGGAAGAAAGCGGCGCATATGAGAGCGGTGCTTAGAAAGGAAAGCCAAATAGCTGAGCACTATAGAAGGCTTGGTGAATTAGAGAATTGGTTGATGGTGGAGACCAACAAATTGACAACGACCTTGACGGAATTGTCTAATTTACGCACAGTCAGGGAAGCAACAGTAGCTTTGAACGTCTGGCAGCCTGAGGTCATTAGGGCAAGGCAAACACAAATTGTTGAACAATGTAGTGTATCTGTTGATTCTCGGTCTCGGACTCTAGATATGGAGCTCAAGATTTGTAAGCAACAAATTGCTATTTTTTGGAAAGCACTTAAAGATGAAAGACAAAGACTCAACTTAGCTAAAGAAGAGTTAACTTCATTGAAGTACCACCCTCTAAAGGATCATAAATTTATAGATAGCAGTAATAATGTATCTCACATCAAGAGGAGGTCAAAGGATGCAATAAATAGCAAGGTAAAACAGTTACGCAGTACATGA

Protein sequence

MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSSSFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKLTTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQIAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINSKVKQLRST

Homology

[Close]

BLAST of Bhi03G002093 vs. TAIR 10
Match: AT1G08710.1 (F-box family protein )

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-53
Identity = 121/235 (51.49%), Postives = 168/235 (71.49%), Query Frame = 0


Query: 2   SELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSS-SS 61
           +E+P ELW +ILE+GVKS   +YKDLCC+SISS RL RLS DD LW  LL  D+P+   S
Sbjct: 4   NEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVS 63

Query: 62  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 121
           +  SS S +K +Y  R ER++ RK AAH RA+LRKES+I+E  RR+ ELE  L  E  +L
Sbjct: 64  ASSSSESPTKFIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERL 123

Query: 122 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 181
            ++  + S+L  VR+A+VALNVWQPEV+R RQ Q+VEQ +V V+ R R L+ME+K+CKQQ
Sbjct: 124 QSSSLQFSDLLKVRQASVALNVWQPEVVRGRQKQMVEQNAVPVEGRLRALEMEMKLCKQQ 183

Query: 182 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIK-RRSKDAIN 235
           I    +AL++ + R ++A +EL S+KYHPL+D+K I + +  S+ K ++ K +IN
Sbjct: 184 IMGLNRALREVKHRYDIAIKELESMKYHPLRDYKSIRNGDQGSNGKTKKLKTSIN 238

[Close]

BLAST of Bhi03G002093 vs. TAIR 10
Match: AT1G08710.2 (F-box family protein )

HSP 1 Score: 206.8 bits (525), Expect = 1.9e-53
Identity = 121/235 (51.49%), Postives = 168/235 (71.49%), Query Frame = 0


Query: 2   SELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSS-SS 61
           +E+P ELW +ILE+GVKS   +YKDLCC+SISS RL RLS DD LW  LL  D+P+   S
Sbjct: 4   NEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVS 63

Query: 62  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 121
           +  SS S +K +Y  R ER++ RK AAH RA+LRKES+I+E  RR+ ELE  L  E  +L
Sbjct: 64  ASSSSESPTKFIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERL 123

Query: 122 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 181
            ++  + S+L  VR+A+VALNVWQPEV+R RQ Q+VEQ +V V+ R R L+ME+K+CKQQ
Sbjct: 124 QSSSLQFSDLLKVRQASVALNVWQPEVVRGRQKQMVEQNAVPVEGRLRALEMEMKLCKQQ 183

Query: 182 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIK-RRSKDAIN 235
           I    +AL++ + R ++A +EL S+KYHPL+D+K I + +  S+ K ++ K +IN
Sbjct: 184 IMGLNRALREVKHRYDIAIKELESMKYHPLRDYKSIRNGDQGSNGKTKKLKTSIN 238

[Close]

BLAST of Bhi03G002093 vs. ExPASy Swiss-Prot
Match: Q9CAZ0 (F-box protein SKIP24 OS=Arabidopsis thaliana OX=3702 GN=SKIP24 PE=1 SV=2)

HSP 1 Score: 206.8 bits (525), Expect = 2.7e-52
Identity = 121/235 (51.49%), Postives = 168/235 (71.49%), Query Frame = 0


Query: 2   SELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSS-SS 61
           +E+P ELW +ILE+GVKS   +YKDLCC+SISS RL RLS DD LW  LL  D+P+   S
Sbjct: 4   NEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNHIVS 63

Query: 62  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 121
           +  SS S +K +Y  R ER++ RK AAH RA+LRKES+I+E  RR+ ELE  L  E  +L
Sbjct: 64  ASSSSESPTKFIYMTRFEREKERKLAAHRRALLRKESEISEWGRRIRELEARLSDEAERL 123

Query: 122 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 181
            ++  + S+L  VR+A+VALNVWQPEV+R RQ Q+VEQ +V V+ R R L+ME+K+CKQQ
Sbjct: 124 QSSSLQFSDLLKVRQASVALNVWQPEVVRGRQKQMVEQNAVPVEGRLRALEMEMKLCKQQ 183

Query: 182 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIK-RRSKDAIN 235
           I    +AL++ + R ++A +EL S+KYHPL+D+K I + +  S+ K ++ K +IN
Sbjct: 184 IMGLNRALREVKHRYDIAIKELESMKYHPLRDYKSIRNGDQGSNGKTKKLKTSIN 238

[Close]

BLAST of Bhi03G002093 vs. NCBI nr
Match: XP_038882938.1 (F-box protein SKIP24 [Benincasa hispida] >XP_038882939.1 F-box protein SKIP24 [Benincasa hispida])

HSP 1 Score: 460.3 bits (1183), Expect = 1.0e-125
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60
           MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS
Sbjct: 1   MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60

Query: 61  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120
           SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL
Sbjct: 61  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120

Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 180
           TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 180

Query: 181 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINSKVKQL 240
           IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINSKVKQL
Sbjct: 181 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINSKVKQL 240

Query: 241 RST 244
           RST
Sbjct: 241 RST 243

[Close]

BLAST of Bhi03G002093 vs. NCBI nr
Match: XP_016901824.1 (PREDICTED: F-box protein SKIP24 isoform X2 [Cucumis melo])

HSP 1 Score: 394.4 bits (1012), Expect = 6.9e-106
Identity = 213/243 (87.65%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 1   MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60
           MSELP ELW+QIL++GVK+  LTYKDLCCVSISSPRLRRLSD D LWSHLLSSDYPSSSS
Sbjct: 1   MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60

Query: 61  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120
           SFPSSASSSKSLYKIRLERDR RKKAAH RAVLRKESQIAEHYRR+G+LE  L+ ET+K 
Sbjct: 61  SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120

Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 180
           TTTLTELSNLRTVREATVALNVWQPEVIRARQ QIVEQCSVSVDSR RTLDMELK+CKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180

Query: 181 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINSKVKQL 240
           IAIF KALKDE++RL LAKEELTSLKYHPLKDHK ++SSNN SHIKRRSKDAINSKVKQL
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINSKVKQL 240

Query: 241 RST 244
           RST
Sbjct: 241 RST 243

[Close]

BLAST of Bhi03G002093 vs. NCBI nr
Match: XP_016901822.1 (PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo] >XP_016901823.1 PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo])

HSP 1 Score: 388.3 bits (996), Expect = 5.0e-104
Identity = 213/248 (85.89%), Postives = 226/248 (91.13%), Query Frame = 0


Query: 1   MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60
           MSELP ELW+QIL++GVK+  LTYKDLCCVSISSPRLRRLSD D LWSHLLSSDYPSSSS
Sbjct: 1   MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60

Query: 61  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120
           SFPSSASSSKSLYKIRLERDR RKKAAH RAVLRKESQIAEHYRR+G+LE  L+ ET+K 
Sbjct: 61  SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120

Query: 121 TTTLTELSNLRTV-----REATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELK 180
           TTTLTELSNLRTV     REATVALNVWQPEVIRARQ QIVEQCSVSVDSR RTLDMELK
Sbjct: 121 TTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180

Query: 181 ICKQQIAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINS 240
           +CKQQIAIF KALKDE++RL LAKEELTSLKYHPLKDHK ++SSNN SHIKRRSKDAINS
Sbjct: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINS 240

Query: 241 KVKQLRST 244
           KVKQLRST
Sbjct: 241 KVKQLRST 248

[Close]

BLAST of Bhi03G002093 vs. NCBI nr
Match: XP_004144305.1 (F-box protein SKIP24 isoform X1 [Cucumis sativus])

HSP 1 Score: 388.3 bits (996), Expect = 5.0e-104
Identity = 208/243 (85.60%), Postives = 222/243 (91.36%), Query Frame = 0


Query: 1   MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60
           MSELP ELW QIL++GVK+Y LTYKDLCCVSISSPRLRRLSD D LWSHLL SDYPSSSS
Sbjct: 1   MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60

Query: 61  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120
           SFPSSASSSKSLYKIRLERDR RKKAAH RAVLRKESQIAEHYRR+ +LE  L+ ET K 
Sbjct: 61  SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120

Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 180
           TT+ TE SNLRTVREATVALNVWQPEVIRARQ QIVEQCSVSVDSR RTLDMELK+CKQQ
Sbjct: 121 TTSFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180

Query: 181 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINSKVKQL 240
           IAIF KALKDE++RL LAKEELTSLKYHPLKDHK+++SSNN +HIKRRSKDAINSKVKQL
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKYMNSSNNDTHIKRRSKDAINSKVKQL 240

Query: 241 RST 244
           RST
Sbjct: 241 RST 243

[Close]

BLAST of Bhi03G002093 vs. NCBI nr
Match: TYK09707.1 (F-box protein SKIP24 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 379.0 bits (972), Expect = 3.0e-101
Identity = 205/242 (84.71%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 1   MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60
           MSELP ELW+QIL++GVK+  LTYKDLCCVSISSPRLRRLSD D LWSHLLSSDYPSSSS
Sbjct: 1   MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60

Query: 61  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120
           SFPSSASSSKSLYKIRLERDR RKKAAH RAVLRKESQIAEHYRR+G+LE  L+ ET+K 
Sbjct: 61  SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120

Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 180
           TTTLTELSNLRTVREATVALNVWQPEVIRARQ QIVEQCSVSVDSR RTLDMELK+CKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180

Query: 181 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINSKVKQL 240
           IAIF KALKDE++RL LAKEELTSLKYHPLKDHK ++SSNN SHIKRRSKDAIN +   L
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINVRFISL 240

Query: 241 RS 243
            +
Sbjct: 241 NT 242

[Close]

BLAST of Bhi03G002093 vs. ExPASy TrEMBL
Match: A0A1S4E0S8 (F-box protein SKIP24 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 3.4e-106
Identity = 213/243 (87.65%), Postives = 226/243 (93.00%), Query Frame = 0


Query: 1   MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60
           MSELP ELW+QIL++GVK+  LTYKDLCCVSISSPRLRRLSD D LWSHLLSSDYPSSSS
Sbjct: 1   MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60

Query: 61  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120
           SFPSSASSSKSLYKIRLERDR RKKAAH RAVLRKESQIAEHYRR+G+LE  L+ ET+K 
Sbjct: 61  SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120

Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 180
           TTTLTELSNLRTVREATVALNVWQPEVIRARQ QIVEQCSVSVDSR RTLDMELK+CKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180

Query: 181 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINSKVKQL 240
           IAIF KALKDE++RL LAKEELTSLKYHPLKDHK ++SSNN SHIKRRSKDAINSKVKQL
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINSKVKQL 240

Query: 241 RST 244
           RST
Sbjct: 241 RST 243

[Close]

BLAST of Bhi03G002093 vs. ExPASy TrEMBL
Match: A0A1S4E0Q4 (F-box protein SKIP24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.4e-104
Identity = 213/248 (85.89%), Postives = 226/248 (91.13%), Query Frame = 0


Query: 1   MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60
           MSELP ELW+QIL++GVK+  LTYKDLCCVSISSPRLRRLSD D LWSHLLSSDYPSSSS
Sbjct: 1   MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60

Query: 61  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120
           SFPSSASSSKSLYKIRLERDR RKKAAH RAVLRKESQIAEHYRR+G+LE  L+ ET+K 
Sbjct: 61  SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120

Query: 121 TTTLTELSNLRTV-----REATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELK 180
           TTTLTELSNLRTV     REATVALNVWQPEVIRARQ QIVEQCSVSVDSR RTLDMELK
Sbjct: 121 TTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180

Query: 181 ICKQQIAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINS 240
           +CKQQIAIF KALKDE++RL LAKEELTSLKYHPLKDHK ++SSNN SHIKRRSKDAINS
Sbjct: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINS 240

Query: 241 KVKQLRST 244
           KVKQLRST
Sbjct: 241 KVKQLRST 248

[Close]

BLAST of Bhi03G002093 vs. ExPASy TrEMBL
Match: A0A0A0L0S2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G416990 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.4e-104
Identity = 208/243 (85.60%), Postives = 222/243 (91.36%), Query Frame = 0


Query: 1   MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60
           MSELP ELW QIL++GVK+Y LTYKDLCCVSISSPRLRRLSD D LWSHLL SDYPSSSS
Sbjct: 1   MSELPDELWNQILQIGVKTYALTYKDLCCVSISSPRLRRLSDHDSLWSHLLFSDYPSSSS 60

Query: 61  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120
           SFPSSASSSKSLYKIRLERDR RKKAAH RAVLRKESQIAEHYRR+ +LE  L+ ET K 
Sbjct: 61  SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVSQLEERLIEETGKW 120

Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 180
           TT+ TE SNLRTVREATVALNVWQPEVIRARQ QIVEQCSVSVDSR RTLDMELK+CKQQ
Sbjct: 121 TTSFTEFSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180

Query: 181 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINSKVKQL 240
           IAIF KALKDE++RL LAKEELTSLKYHPLKDHK+++SSNN +HIKRRSKDAINSKVKQL
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKYMNSSNNDTHIKRRSKDAINSKVKQL 240

Query: 241 RST 244
           RST
Sbjct: 241 RST 243

[Close]

BLAST of Bhi03G002093 vs. ExPASy TrEMBL
Match: A0A5D3CCI3 (F-box protein SKIP24 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001230 PE=4 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.5e-101
Identity = 205/242 (84.71%), Postives = 220/242 (90.91%), Query Frame = 0


Query: 1   MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60
           MSELP ELW+QIL++GVK+  LTYKDLCCVSISSPRLRRLSD D LWSHLLSSDYPSSSS
Sbjct: 1   MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60

Query: 61  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120
           SFPSSASSSKSLYKIRLERDR RKKAAH RAVLRKESQIAEHYRR+G+LE  L+ ET+K 
Sbjct: 61  SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120

Query: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELKICKQQ 180
           TTTLTELSNLRTVREATVALNVWQPEVIRARQ QIVEQCSVSVDSR RTLDMELK+CKQQ
Sbjct: 121 TTTLTELSNLRTVREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELKLCKQQ 180

Query: 181 IAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINSKVKQL 240
           IAIF KALKDE++RL LAKEELTSLKYHPLKDHK ++SSNN SHIKRRSKDAIN +   L
Sbjct: 181 IAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINVRFISL 240

Query: 241 RS 243
            +
Sbjct: 241 NT 242

[Close]

BLAST of Bhi03G002093 vs. ExPASy TrEMBL
Match: A0A1S3C1S8 (F-box protein SKIP24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.7e-100
Identity = 205/242 (84.71%), Postives = 218/242 (90.08%), Query Frame = 0


Query: 1   MSELPVELWTQILEVGVKSYVLTYKDLCCVSISSPRLRRLSDDDCLWSHLLSSDYPSSSS 60
           MSELP ELW+QIL++GVK+  LTYKDLCCVSISSPRLRRLSD D LWSHLLSSDYPSSSS
Sbjct: 1   MSELPDELWSQILQIGVKTSALTYKDLCCVSISSPRLRRLSDHDSLWSHLLSSDYPSSSS 60

Query: 61  SFPSSASSSKSLYKIRLERDRNRKKAAHMRAVLRKESQIAEHYRRLGELENWLMVETNKL 120
           SFPSSASSSKSLYKIRLERDR RKKAAH RAVLRKESQIAEHYRR+G+LE  L+ ET+K 
Sbjct: 61  SFPSSASSSKSLYKIRLERDRYRKKAAHTRAVLRKESQIAEHYRRVGQLEERLIEETSKC 120

Query: 121 TTTLTELSNLRTV-----REATVALNVWQPEVIRARQTQIVEQCSVSVDSRSRTLDMELK 180
           TTTLTELSNLRTV     REATVALNVWQPEVIRARQ QIVEQCSVSVDSR RTLDMELK
Sbjct: 121 TTTLTELSNLRTVRFGRLREATVALNVWQPEVIRARQKQIVEQCSVSVDSRLRTLDMELK 180

Query: 181 ICKQQIAIFWKALKDERQRLNLAKEELTSLKYHPLKDHKFIDSSNNVSHIKRRSKDAINS 238
           +CKQQIAIF KALKDE++RL LAKEELTSLKYHPLKDHK ++SSNN SHIKRRSKDAIN 
Sbjct: 181 LCKQQIAIFQKALKDEKKRLELAKEELTSLKYHPLKDHKSMNSSNNDSHIKRRSKDAINC 240

The following BLAST results are available for this feature:

BLAST of Bhi03G002093 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08710.1	1.9e-53	51.49	F-box family protein	[more]
AT1G08710.2	1.9e-53	51.49	F-box family protein	[more]

BLAST of Bhi03G002093 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAZ0	2.7e-52	51.49	F-box protein SKIP24 OS=Arabidopsis thaliana OX=3702 GN=SKIP24 PE=1 SV=2	[more]

BLAST of Bhi03G002093 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038882938.1	1.0e-125	100.00	F-box protein SKIP24 [Benincasa hispida] >XP_038882939.1 F-box protein SKIP24 [B...	[more]
XP_016901824.1	6.9e-106	87.65	PREDICTED: F-box protein SKIP24 isoform X2 [Cucumis melo]	[more]
XP_016901822.1	5.0e-104	85.89	PREDICTED: F-box protein SKIP24 isoform X1 [Cucumis melo] >XP_016901823.1 PREDIC...	[more]
XP_004144305.1	5.0e-104	85.60	F-box protein SKIP24 isoform X1 [Cucumis sativus]	[more]
TYK09707.1	3.0e-101	84.71	F-box protein SKIP24 isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of Bhi03G002093 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E0S8	3.4e-106	87.65	F-box protein SKIP24 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=...	[more]
A0A1S4E0Q4	2.4e-104	85.89	F-box protein SKIP24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=...	[more]
A0A0A0L0S2	2.4e-104	85.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G416990 PE=4 SV=1	[more]
A0A5D3CCI3	1.5e-101	84.71	F-box protein SKIP24 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C1S8	4.7e-100	84.71	F-box protein SKIP24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103495869 PE=4 SV=...	[more]

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 188..208
None	No IPR available	COILS	Coil	Coil	coord: 230..243
None	No IPR available	GENE3D	1.20.1280.50		coord: 1..112 e-value: 5.0E-6 score: 28.4
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 1..78

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M002093	Bhi03M002093	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005515	protein binding