Bhi03G002045 (gene) Wax gourd (B227) v1

Overview


Name	Bhi03G002045
Type	gene
Organism	Benincasa hispida (Wax gourd (B227) v1)
Description	Unknown protein
Location	chr3: 59698982 .. 59699144 (-)
RNA-Seq Expression	Bhi03G002045
Synteny	Bhi03G002045

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATGCGACATCTGAGTTCACAAAGAAACTAGATACTATGGAAGATGATAAAGAAGATGATCAAGATAATCCAAATCTTGCTACAACTTGTGGGGTTGAACAATTAAAGTCAAAGAGAGATGATGAACATGAAGGAGGTGGAGGAACGGGGAATAAAGAATAA

mRNA sequence

AAATGCGACATCTGAGTTCACAAAGAAACTAGATACTATGGAAGATGATAAAGAAGATGATCAAGATAATCCAAATCTTGCTACAACTTGTGGGGTTGAACAATTAAAGTCAAAGAGAGATGATGAACATGAAGGAGGTGGAGGAACGGGGAATAAAGAATAA

Coding sequence (CDS)

AAATGCGACATCTGAGTTCACAAAGAAACTAGATACTATGGAAGATGATAAAGAAGATGATCAAGATAATCCAAATCTTGCTACAACTTGTGGGGTTGAACAATTAAAGTCAAAGAGAGATGATGAACATGAAGGAGGTGGAGGAACGGGGAATAAAGAATAA

Protein sequence

NATSEFTKKLDTMEDDKEDDQDNPNLATTCGVEQLKSKRDDEHEGGGGTGNKE

Homology

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BLAST of Bhi03G002045 vs. NCBI nr
Match: XP_038889592.1 (uncharacterized protein LOC120079469 [Benincasa hispida])

HSP 1 Score: 80.1 bits (196), Expect = 6.3e-12
Identity = 40/49 (81.63%), Postives = 43/49 (87.76%), Query Frame = 0


Query: 5  EFTKKLDTMEDDKEDDQDNPNLATTCGVEQLKSKRDDEHEGGGGTGNKE 54
          EFTK LDTMEDDK D+QDNPNL   CGVE+LKSKRDDEHEGGG TGN+E
Sbjct: 46 EFTKTLDTMEDDKGDNQDNPNLNMACGVEKLKSKRDDEHEGGGRTGNRE 94

The following BLAST results are available for this feature:

BLAST of Bhi03G002045 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G002045 vs.


Match Name	E-value	Identity	Description

BLAST of Bhi03G002045 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889592.1	6.3e-12	81.63	uncharacterized protein LOC120079469 [Benincasa hispida]	[more]

BLAST of Bhi03G002045 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Wax gourd (B227) v1
Date Performed: 2021-10-22


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Bhi03M002045	Bhi03M002045	mRNA