Bhi03G002043 (gene) Wax gourd (B227) v1

Overview
NameBhi03G002043
Typegene
OrganismBenincasa hispida (Wax gourd (B227) v1)
DescriptionUnknown protein
Locationchr3: 59649260 .. 59649444 (+)
RNA-Seq ExpressionBhi03G002043
SyntenyBhi03G002043
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAGTCAACTGCTGCGCCTCAACGCATTTCGAGGAAACCAACTAGCTCCGGGTTCGAGTGGCATTTTCACCGTCCTAACCGACAACTCAATCCCACTGATTTTCTTCAAACATCAGTCGGTTCGGACCTTCACTTTAGAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAG

mRNA sequence

ATGTCTAGTCAACTGCTGCGCCTCAACGCATTTCGAGGAAACCAACTAGCTCCGGGTTCGAGTGGCATTTTCACCGTCCTAACCGACAACTCAATCCCACTGATTTTCTTCAAACATCAGTCGGTTCGGACCTTCACTTTAGAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAG

Coding sequence (CDS)

ATGTCTAGTCAACTGCTGCGCCTCAACGCATTTCGAGGAAACCAACTAGCTCCGGGTTCGAGTGGCATTTTCACCGTCCTAACCGACAACTCAATCCCACTGATTTTCTTCAAACATCAGTCGGTTCGGACCTTCACTTTAGAGTTTCACCCAAGCTTCATCCTGGTCATGGATAGATCACCCAG

Protein sequence

MSSQLLRLNAFRGNQLAPGSSGIFTVLTDNSIPLIFFKHQSVRTFTLEFHPSFILVMDRSP
Homology
[Close]
BLAST of Bhi03G002043 vs. NCBI nr
Match: AGB85039.1 (hypothetical protein CHLPROCp009, partial [Auxenochlorella protothecoides])

HSP 1 Score: 53.5 bits (127), Expect = 7.3e-04
Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 11 FRGNQLAPGSSGIFTVLTDNSIPLIFFKHQSVRTFTLEFHPSFILVMDRSP 62
          F  NQLAPGS+GI + LT    P+  F+H+SVRTFT  +HPSFILVM RSP
Sbjct: 24 FGENQLAPGSTGI-SPLTTTHPPI--FQHRSVRTFTW-YHPSFILVMVRSP 70

[Close]
BLAST of Bhi03G002043 vs. ExPASy TrEMBL
Match: L7QL57 (Uncharacterized protein (Fragment) OS=Auxenochlorella protothecoides OX=3075 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.5e-04
Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 0 

Query: 11 FRGNQLAPGSSGIFTVLTDNSIPLIFFKHQSVRTFTLEFHPSFILVMDRSP 62
          F  NQLAPGS+GI + LT    P+  F+H+SVRTFT  +HPSFILVM RSP
Sbjct: 24 FGENQLAPGSTGI-SPLTTTHPPI--FQHRSVRTFTW-YHPSFILVMVRSP 70

The following BLAST results are available for this feature:
BLAST of Bhi03G002043 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G002043 vs.
Match NameE-valueIdentityDescription
BLAST of Bhi03G002043 vs. NCBI nr
Match NameE-valueIdentityDescription
AGB85039.17.3e-0462.75hypothetical protein CHLPROCp009, partial [Auxenochlorella protothecoides][more]
BLAST of Bhi03G002043 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
L7QL573.5e-0462.75Uncharacterized protein (Fragment) OS=Auxenochlorella protothecoides OX=3075 PE=... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Bhi03M002043Bhi03M002043mRNA